EWM30605.1, cds66 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30605.1 vs. NCBI_GenBank
Match: gi|585113277|gb|EWM30605.1| (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 644.81 bits (1662), Expect = 0.000e+0 Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0 Query: 1 MADNGVVTVHGEPMNMIALPQLPLRAEHPVPALPGPKEEEKRLQQPLLQPTHPSLQQQHPAVPEEEHAPQSAPFVAPGELAPAPLILPLPPLPPSTNISPDPIPPARKSSILSGGMGNQGRWTEAEHDLFLEGLREHGKGAWKLISEKVVRTRSAEQVRIHAQKYFLRQSKQEKKKNAANKGAMAEIEGGGKESNGGGGPDGPGAGSKEGHWTDEEHELFLRCWEQYGKSWKKLSEIIGTRTNEQIRTHAQKYFAKLRELRERGYEGAYYMDGTRHLTKTFLGGTQPPGLAASSRGGGGGEEGRGEGEKEGEEEEGQLNRE 321 MADNGVVTVHGEPMNMIALPQLPLRAEHPVPALPGPKEEEKRLQQPLLQPTHPSLQQQHPAVPEEEHAPQSAPFVAPGELAPAPLILPLPPLPPSTNISPDPIPPARKSSILSGGMGNQGRWTEAEHDLFLEGLREHGKGAWKLISEKVVRTRSAEQVRIHAQKYFLRQSKQEKKKNAANKGAMAEIEGGGKESNGGGGPDGPGAGSKEGHWTDEEHELFLRCWEQYGKSWKKLSEIIGTRTNEQIRTHAQKYFAKLRELRERGYEGAYYMDGTRHLTKTFLGGTQPPGLAASSRGGGGGEEGRGEGEKEGEEEEGQLNRE Sbjct: 1 MADNGVVTVHGEPMNMIALPQLPLRAEHPVPALPGPKEEEKRLQQPLLQPTHPSLQQQHPAVPEEEHAPQSAPFVAPGELAPAPLILPLPPLPPSTNISPDPIPPARKSSILSGGMGNQGRWTEAEHDLFLEGLREHGKGAWKLISEKVVRTRSAEQVRIHAQKYFLRQSKQEKKKNAANKGAMAEIEGGGKESNGGGGPDGPGAGSKEGHWTDEEHELFLRCWEQYGKSWKKLSEIIGTRTNEQIRTHAQKYFAKLRELRERGYEGAYYMDGTRHLTKTFLGGTQPPGLAASSRGGGGGEEGRGEGEKEGEEEEGQLNRE 321
BLAST of EWM30605.1 vs. NCBI_GenBank
Match: gi|585106598|gb|EWM24966.1| (SANT/Myb domain protein [Nannochloropsis gaditana]) HSP 1 Score: 169.474 bits (428), Expect = 1.678e-44 Identity = 101/262 (38.55%), Postives = 143/262 (54.58%), Query Frame = 0 Query: 30 VPALPGPKEEEKRLQQPLLQPTHPSLQQQHPAVPEEEHAPQSAPFVAPGELAPAPLILPLPPLPPSTNISPDPIPPARKSSILSGGMGNQGRWTEAEHDLFLEGLREHGKGAWKLISEKVVRTRSAEQVRIHAQKYFLRQSKQEKK-KNAANKGAMAEIEGGGKESNGGGGPDGPGAG-SKEGHWTDEEHELFLRCWEQYGKSWKKLSEIIGTRTNEQIRTHAQKYFAKLRELRERGYEGAYYMDGTRHLTKTFLGGTQPPG 289 +P L P + ++RL L L H + H S A +L L + P+ + + ++I++ + + WT EH FLEGL+++G+ +W+ IS ++ TR+ E+++ +A Y + Q K + A+ KG DG A +KEGHWTDEEHE FL+CW +YGKSWKK+S+++ TR+NEQIRTHAQKYF KL +LR GYEG+Y MDGTRHLTKTFL Q G Sbjct: 1 MPGLSLPLKLKRRLNIHSLY-----LNMHHIIL----HGSYSYTGRAVAKLLTLHFRLASCAMDPAISAASSANVSWNDTAIITRPIASSD-WTTEEHARFLEGLKQYGR-SWESISTLLLPTRTPEEIKNYASLYLVNQPKDLTPPRTASTKG-----------------KDGASAARAKEGHWTDEEHEFFLKCWAKYGKSWKKISQVMKTRSNEQIRTHAQKYFTKLDQLRTCGYEGSYTMDGTRHLTKTFLKKAQCEG 234
BLAST of EWM30605.1 vs. NCBI_GenBank
Match: gi|970027994|ref|XP_015075285.1| (PREDICTED: transcription factor DIVARICATA-like [Solanum pennellii]) HSP 1 Score: 94.3597 bits (233), Expect = 3.421e-19 Identity = 58/161 (36.02%), Postives = 80/161 (49.69%), Query Frame = 0 Query: 121 RWTEAEHDLFLEGLREHGKGAWKLISEKVVRTRSAEQVRIHAQKYFLRQSKQEKKKNAANKGAMAEIEGGGKESNGGGGPDGPG-------------------AGSKEGHWTDEEHELFLRCWEQYGKSWKKLS-EIIGTRTNEQIRTHAQKYFAKLRELR 261 RW+E EH FL GL E G G W I+++ V +R+ Q+ HAQKYF Q + K + + GKE + P P + +EG WT+EEHE FL E+ G++W ++S E + +RT QI +HAQKYF LR R Sbjct: 33 RWSEEEHRAFLCGLEELGTGNWSEIAKQFVPSRTRTQISSHAQKYFAWQKAKNDKAAKSTSNVDSSSPTSGKEDSNEERPLSPMPISYSVPNVSNNGDSVNLLSRKQEGKWTEEEHEAFLIGMEKVGRNWTRVSKEFVQSRTPTQITSHAQKYFESLRNNR 193
BLAST of EWM30605.1 vs. NCBI_GenBank
Match: gi|460387632|ref|XP_004239479.1| (PREDICTED: transcription factor DIVARICATA-like [Solanum lycopersicum]) HSP 1 Score: 92.0485 bits (227), Expect = 1.426e-18 Identity = 58/154 (37.66%), Postives = 78/154 (50.65%), Query Frame = 0 Query: 121 RWTEAEHDLFLEGLREHGKGAWKLISEKVVRTRSAEQVRIHAQKYFLRQSKQEKKKNAANKGAMAEIEGGGKES----------NGGGGPDGPGAGSK--EGHWTDEEHELFLRCWEQYGKSWKKLS-EIIGTRTNEQIRTHAQKYFAKLRELR 261 RW+E EH FL GL + G G W I+++ V +R+ Q+ HAQKYF Q + K + GKE N D S+ EG WT+EEHE FL E+ G++W ++S E + +RT QI +HAQKYF LR R Sbjct: 26 RWSEEEHRAFLCGLEKLGTGNWSEIAKQFVPSRTRTQISSHAQKYFAWQKTRNDKAAKSTSNVELSSSTSGKEERPLSPMPISYNDSNNGDSVNLLSRKQEGKWTEEEHEAFLIGMEKVGRNWTRVSKEFVLSRTPTQITSHAQKYFEGLRNDR 179
BLAST of EWM30605.1 vs. NCBI_GenBank
Match: gi|1210512502|dbj|GAX28359.1| (protein MYSM1 [Fistulifera solaris]) HSP 1 Score: 84.3445 bits (207), Expect = 1.921e-14 Identity = 41/86 (47.67%), Postives = 51/86 (59.30%), Query Frame = 0 Query: 188 EGGGKESNGGGGPDGPGAGSKEGHWTDEEHELFLRCWEQYGKSWKKLSEIIGTRTNEQIRTHAQKYFAKLRELRERGYEGAYYMDG 273 + E G G G G WT EEH LFL+ EQ+GK WKK++ +I +RT QIRTHAQKYF KL + R+ G EG M+G Sbjct: 78 QSATTEGASGQGAASLAPGENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDITMEG 163 HSP 2 Score: 65.4698 bits (158), Expect = 3.559e-8 Identity = 29/54 (53.70%), Postives = 40/54 (74.07%), Query Frame = 0 Query: 118 NQGRWTEAEHDLFLEGLREHGKGAWKLISEKVVRTRSAEQVRIHAQKYFLRQSK 171 N GRWT EH LFL+GL +HGKG WK I+ ++++R+ Q+R HAQKYF + +K Sbjct: 98 NTGRWTAEEHRLFLQGLEQHGKG-WKKIA-SLIKSRTVVQIRTHAQKYFQKLAK 149
BLAST of EWM30605.1 vs. NCBI_GenBank
Match: gi|1210516787|dbj|GAX24276.1| (protein MYSM1 [Fistulifera solaris]) HSP 1 Score: 83.9593 bits (206), Expect = 2.129e-14 Identity = 38/68 (55.88%), Postives = 47/68 (69.12%), Query Frame = 0 Query: 206 GSKEGHWTDEEHELFLRCWEQYGKSWKKLSEIIGTRTNEQIRTHAQKYFAKLRELRERGYEGAYYMDG 273 G G WT EEH LFL+ EQ+GK WKK++ +I +RT QIRTHAQKYF KL + R+ G EG M+G Sbjct: 95 GENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDITMEG 162 HSP 2 Score: 65.4698 bits (158), Expect = 3.191e-8 Identity = 29/54 (53.70%), Postives = 40/54 (74.07%), Query Frame = 0 Query: 118 NQGRWTEAEHDLFLEGLREHGKGAWKLISEKVVRTRSAEQVRIHAQKYFLRQSK 171 N GRWT EH LFL+GL +HGKG WK I+ ++++R+ Q+R HAQKYF + +K Sbjct: 97 NTGRWTAEEHRLFLQGLEQHGKG-WKKIA-SLIKSRTVVQIRTHAQKYFQKLAK 148
BLAST of EWM30605.1 vs. NCBI_GenBank
Match: gi|219128113|ref|XP_002184266.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404497|gb|EEC44444.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 83.5741 bits (205), Expect = 3.475e-14 Identity = 38/68 (55.88%), Postives = 47/68 (69.12%), Query Frame = 0 Query: 206 GSKEGHWTDEEHELFLRCWEQYGKSWKKLSEIIGTRTNEQIRTHAQKYFAKLRELRERGYEGAYYMDG 273 G G WT EEH LFL+ EQ+GK WKK++ +I +RT QIRTHAQKYF KL + R+ G EG M+G Sbjct: 114 GENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVAMEG 181 HSP 2 Score: 65.4698 bits (158), Expect = 3.581e-8 Identity = 29/54 (53.70%), Postives = 40/54 (74.07%), Query Frame = 0 Query: 118 NQGRWTEAEHDLFLEGLREHGKGAWKLISEKVVRTRSAEQVRIHAQKYFLRQSK 171 N GRWT EH LFL+GL +HGKG WK I+ ++++R+ Q+R HAQKYF + +K Sbjct: 116 NTGRWTAEEHRLFLQGLEQHGKG-WKKIA-SLIKSRTVVQIRTHAQKYFQKLAK 167
BLAST of EWM30605.1 vs. NCBI_GenBank
Match: gi|685267017|ref|XP_009122742.1| (PREDICTED: transcription factor DIVARICATA-like [Brassica rapa]) HSP 1 Score: 75.0998 bits (183), Expect = 3.037e-13 Identity = 38/79 (48.10%), Postives = 49/79 (62.03%), Query Frame = 0 Query: 122 WTEAEHDLFLEGLREHGKGAWKLISEKVVRTRSAEQVRIHAQKYFLRQSKQEKKKNAANKGAMAEIEGGGKESNGGGGP 200 WTE EH LFLEGL ++G+G WK IS K V+TR+ QV HAQKYFLR QE +K A + ++ +I +N P Sbjct: 12 WTEEEHRLFLEGLAKYGRGDWKNISRKSVKTRTPTQVASHAQKYFLR---QEAQKKAKKRSSIHDINSIDHAANNVSAP 87
BLAST of EWM30605.1 vs. NCBI_GenBank
Match: gi|1072976107|ref|XP_018438383.1| (PREDICTED: transcription factor DIVARICATA-like [Raphanus sativus]) HSP 1 Score: 77.0258 bits (188), Expect = 3.683e-13 Identity = 39/79 (49.37%), Postives = 50/79 (63.29%), Query Frame = 0 Query: 122 WTEAEHDLFLEGLREHGKGAWKLISEKVVRTRSAEQVRIHAQKYFLRQSKQEKKKNAANKGAMAEIEGGGKESNGGGGP 200 WTE EH LFLEGL + GKG W+ IS K+VRT+++ QV HAQKYFLRQ KKNA + ++ +I +N P Sbjct: 88 WTEEEHRLFLEGLEKCGKGNWRDISRKIVRTKNSAQVASHAQKYFLRQV---AKKNAKKRSSIHDITLIDHAANNVTAP 163
BLAST of EWM30605.1 vs. NCBI_GenBank
Match: gi|219128116|ref|XP_002184267.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404498|gb|EEC44445.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 80.8777 bits (198), Expect = 3.857e-13 Identity = 38/68 (55.88%), Postives = 47/68 (69.12%), Query Frame = 0 Query: 206 GSKEGHWTDEEHELFLRCWEQYGKSWKKLSEIIGTRTNEQIRTHAQKYFAKLRELRERGYEGAYYMDG 273 G G WT EEH LFL+ EQ+GK WKK++ +I +RT QIRTHAQKYF KL + R+ G EG M+G Sbjct: 114 GENTGRWTAEEHRLFLQGLEQHGKGWKKIASLIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVAMEG 181 HSP 2 Score: 63.929 bits (154), Expect = 1.320e-7 Identity = 34/75 (45.33%), Postives = 47/75 (62.67%), Query Frame = 0 Query: 118 NQGRWTEAEHDLFLEGLREHGKGAWKLISEKVVRTRSAEQVRIHAQKYF-----LRQSKQEKKKNAANKGAMAEI 187 N GRWT EH LFL+GL +HGKG WK I+ ++++R+ Q+R HAQKYF RQ+ +E +G +A I Sbjct: 116 NTGRWTAEEHRLFLQGLEQHGKG-WKKIAS-LIKSRTVVQIRTHAQKYFQKLAKARQNGEEGDVAMEGRGGVASI 188 The following BLAST results are available for this feature:
BLAST of EWM30605.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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