EWM24068.1, cds6599 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24068.1 vs. NCBI_GenBank
Match: gi|553194922|ref|XP_005856053.1| (20S proteasome subunit beta 2 [Nannochloropsis gaditana CCMP526] >gi|422292999|gb|EKU20300.1| 20S proteasome subunit beta 2 [Nannochloropsis gaditana CCMP526] >gi|585105360|gb|EWM24068.1| 26s proteasome beta type 7 subunit [Nannochloropsis gaditana]) HSP 1 Score: 595.119 bits (1533), Expect = 0.000e+0 Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0
Query: 1 MHGESGKQSLRGALKEDVPGFNFDNYARNASLPTETTMHLPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQGHVSAALVLGGVDSSGAHLYQIYPHGSTDKNPYVTMGSGSLAAMSVFETGFKEDMTEAEAIELVKEAILAGIYNDLGSGSNVDLTIIRRNGEVTVLRGYLTPNDVEPLRTSYKRPAALSVPAGATAVLSTHMDPARPGLEGLVIEDATAMTF 290
MHGESGKQSLRGALKEDVPGFNFDNYARNASLPTETTMHLPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQGHVSAALVLGGVDSSGAHLYQIYPHGSTDKNPYVTMGSGSLAAMSVFETGFKEDMTEAEAIELVKEAILAGIYNDLGSGSNVDLTIIRRNGEVTVLRGYLTPNDVEPLRTSYKRPAALSVPAGATAVLSTHMDPARPGLEGLVIEDATAMTF
Sbjct: 1 MHGESGKQSLRGALKEDVPGFNFDNYARNASLPTETTMHLPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQGHVSAALVLGGVDSSGAHLYQIYPHGSTDKNPYVTMGSGSLAAMSVFETGFKEDMTEAEAIELVKEAILAGIYNDLGSGSNVDLTIIRRNGEVTVLRGYLTPNDVEPLRTSYKRPAALSVPAGATAVLSTHMDPARPGLEGLVIEDATAMTF 290
BLAST of EWM24068.1 vs. NCBI_GenBank
Match: gi|298709136|emb|CBJ31081.1| (26S proteasome beta type 7 subunit [Ectocarpus siliculosus]) HSP 1 Score: 389.423 bits (999), Expect = 1.452e-133 Identity = 198/294 (67.35%), Postives = 227/294 (77.21%), Query Frame = 0
Query: 8 QSLRGALKEDV----------PGFNFDNYARNASLPTETTMH-----LPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQGHVSAALVLGGVDSSGAHLYQIYPHGSTDKNPYVTMGSGSLAAMSVFETGFKEDMTEAEAIELVKEAILAGIYNDLGSGSNVDLTIIRRNGEVTVLRGYLTPNDVEPLRTSYKRPAALSVPAGATAVLSTHMDPARPGLEGLV-IEDA 285
QS+ L+E+V GF+F+N+ RNA + E LP A TGTTI G +K GVVLGADTRATGGTEV DKNCEKIHYLAPNIYCCGAGTAADTEKTTEMIS QLDLLRLSTG+ SRVVTACTMLKRMLFRYQG+VSAALVLGGVD +G HLY IYPHGS+DK PY+TMGSGSLAAMSVFETGFKEDM EAEA+ELVK+AI+AG++NDLGSGSNVD+T+IR GE + RG PN+V LR + +RPAA+ VP GAT +L++ P L LV +EDA
Sbjct: 12 QSVPADLREEVLSASTTNAGGGGFDFENHHRNARIAAELAKSGKEGTLPRAKLTGTTICGCIYKGGVVLGADTRATGGTEVVDKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISGQLDLLRLSTGTQSRVVTACTMLKRMLFRYQGYVSAALVLGGVDVTGPHLYNIYPHGSSDKLPYLTMGSGSLAAMSVFETGFKEDMEEAEAVELVKQAIMAGVFNDLGSGSNVDVTVIRPGGETAIFRGLEKPNEVSELRKTVERPAAIKVPKGATEILASKFQP----LSSLVTVEDA 301
BLAST of EWM24068.1 vs. NCBI_GenBank
Match: gi|676393803|ref|XP_009040179.1| (hypothetical protein AURANDRAFT_69937 [Aureococcus anophagefferens] >gi|323449160|gb|EGB05050.1| hypothetical protein AURANDRAFT_69937 [Aureococcus anophagefferens]) HSP 1 Score: 355.525 bits (911), Expect = 1.410e-120 Identity = 177/250 (70.80%), Postives = 199/250 (79.60%), Query Frame = 0
Query: 20 GFNFDNYARNASLPTETTMH-LPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQGHVSAALVLGGVDSSGAHLYQIYPHGSTDKNPYVTMGSGSLAAMSVFETGFKEDMTEAEAIELVKEAILAGIYNDLGSGSNVDLTIIRRNGEVTVLRGYLTPNDVEPLRTSYKRPAALSVPAGATAVLST 268
GF+F ARN + +P M TGTTI G+ + G+VLGADTRAT G+EVADKNCEKIHYLAPNIYCCGAGTAADTEKTTE+I+SQL+LLRLSTG+ SRVV A T+LKRMLF+YQGH+ AALVLGGVD +G LYQIYPHGST K PYVTMGSGSLAAMSVFET +K+ M EA A+ LVK AI AGI+NDLGSGSNVD+TIIR G V+RGY TPND PLR +Y RP AL PA ATAVLST
Sbjct: 18 GFDFGMTARNEQIAAAAGGRPMPQPMSTGTTICGMVYDGGIVLGADTRATAGSEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTELIASQLELLRLSTGTQSRVVAAVTLLKRMLFKYQGHIGAALVLGGVDCTGPGLYQIYPHGSTSKLPYVTMGSGSLAAMSVFETEYKDGMDEAGAVALVKNAIRAGIFNDLGSGSNVDVTIIRAGGASEVIRGYETPNDTAPLRAAYARPKALIPPAAATAVLST 267
BLAST of EWM24068.1 vs. NCBI_GenBank
Match: gi|325182083|emb|CCA16537.1| (proteasome subunit beta type7 putative [Albugo laibachii Nc14]) HSP 1 Score: 351.288 bits (900), Expect = 2.451e-118 Identity = 178/272 (65.44%), Postives = 213/272 (78.31%), Query Frame = 0
Query: 20 GFNFDNYARNASLPTETTMHLPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQGHVSAALVLGGVDSSGAHLYQIYPHGSTDKNPYVTMGSGSLAAMSVFETGFKEDMTEAEAIELVKEAILAGIYNDLGSGSNVDLTIIRR--NG-EVTVLRGYLTPNDVEPLRTSYKRPAALSVPAGATAVLSTHMDPARPGLEGLVIEDATAM 288
GF+F N RN L + + + AMKTGTTI GV +KDGVVLGADTR+TGGT V DKNCEKIHY+APNIYCCGAGTAADTE TT +ISSQL+L RL+T + SRVVTA T+LK+MLFRYQGH+SAALVLGGVD++G HLY +YPHGSTDK PYVTMGSGSLAAMS+FE G+K+DMTE EA +LV++AILAG++NDLGSGSNVD+TII++ NG EV + PN+V LR KR +P GATAVL + + RP LV+E+AT M
Sbjct: 51 GFDFQNCERNKRLMQDGNLTI-KAMKTGTTICGVVYKDGVVLGADTRSTGGTIVMDKNCEKIHYIAPNIYCCGAGTAADTENTTALISSQLELHRLNTNTESRVVTAMTLLKQMLFRYQGHISAALVLGGVDATGPHLYTVYPHGSTDKLPYVTMGSGSLAAMSMFEQGYKDDMTEEEAKKLVQDAILAGVFNDLGSGSNVDITIIKKGPNGVEVVQDINSIKPNEVSQLRDQVKRNIVTDIPRGATAVLKSTFEKFRP---ELVVEEATPM 318
BLAST of EWM24068.1 vs. NCBI_GenBank
Match: gi|325182082|emb|CCA16536.1| (proteasome subunit beta type7 putative [Albugo laibachii Nc14]) HSP 1 Score: 350.903 bits (899), Expect = 2.476e-118 Identity = 178/272 (65.44%), Postives = 213/272 (78.31%), Query Frame = 0
Query: 20 GFNFDNYARNASLPTETTMHLPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQGHVSAALVLGGVDSSGAHLYQIYPHGSTDKNPYVTMGSGSLAAMSVFETGFKEDMTEAEAIELVKEAILAGIYNDLGSGSNVDLTIIRR--NG-EVTVLRGYLTPNDVEPLRTSYKRPAALSVPAGATAVLSTHMDPARPGLEGLVIEDATAM 288
GF+F N RN L + + + AMKTGTTI GV +KDGVVLGADTR+TGGT V DKNCEKIHY+APNIYCCGAGTAADTE TT +ISSQL+L RL+T + SRVVTA T+LK+MLFRYQGH+SAALVLGGVD++G HLY +YPHGSTDK PYVTMGSGSLAAMS+FE G+K+DMTE EA +LV++AILAG++NDLGSGSNVD+TII++ NG EV + PN+V LR KR +P GATAVL + + RP LV+E+AT M
Sbjct: 42 GFDFQNCERNKRLMQDGNLTI-KAMKTGTTICGVVYKDGVVLGADTRSTGGTIVMDKNCEKIHYIAPNIYCCGAGTAADTENTTALISSQLELHRLNTNTESRVVTAMTLLKQMLFRYQGHISAALVLGGVDATGPHLYTVYPHGSTDKLPYVTMGSGSLAAMSMFEQGYKDDMTEEEAKKLVQDAILAGVFNDLGSGSNVDITIIKKGPNGVEVVQDINSIKPNEVSQLRDQVKRNIVTDIPRGATAVLKSTFEKFRP---ELVVEEATPM 309
BLAST of EWM24068.1 vs. NCBI_GenBank
Match: gi|325182084|emb|CCA16538.1| (proteasome subunit beta type7 putative [Albugo laibachii Nc14]) HSP 1 Score: 351.288 bits (900), Expect = 2.684e-118 Identity = 178/272 (65.44%), Postives = 213/272 (78.31%), Query Frame = 0
Query: 20 GFNFDNYARNASLPTETTMHLPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQGHVSAALVLGGVDSSGAHLYQIYPHGSTDKNPYVTMGSGSLAAMSVFETGFKEDMTEAEAIELVKEAILAGIYNDLGSGSNVDLTIIRR--NG-EVTVLRGYLTPNDVEPLRTSYKRPAALSVPAGATAVLSTHMDPARPGLEGLVIEDATAM 288
GF+F N RN L + + + AMKTGTTI GV +KDGVVLGADTR+TGGT V DKNCEKIHY+APNIYCCGAGTAADTE TT +ISSQL+L RL+T + SRVVTA T+LK+MLFRYQGH+SAALVLGGVD++G HLY +YPHGSTDK PYVTMGSGSLAAMS+FE G+K+DMTE EA +LV++AILAG++NDLGSGSNVD+TII++ NG EV + PN+V LR KR +P GATAVL + + RP LV+E+AT M
Sbjct: 45 GFDFQNCERNKRLMQDGNLTI-KAMKTGTTICGVVYKDGVVLGADTRSTGGTIVMDKNCEKIHYIAPNIYCCGAGTAADTENTTALISSQLELHRLNTNTESRVVTAMTLLKQMLFRYQGHISAALVLGGVDATGPHLYTVYPHGSTDKLPYVTMGSGSLAAMSMFEQGYKDDMTEEEAKKLVQDAILAGVFNDLGSGSNVDITIIKKGPNGVEVVQDINSIKPNEVSQLRDQVKRNIVTDIPRGATAVLKSTFEKFRP---ELVVEEATPM 312
BLAST of EWM24068.1 vs. NCBI_GenBank
Match: gi|635370599|emb|CCI41189.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 346.665 bits (888), Expect = 8.505e-117 Identity = 174/272 (63.97%), Postives = 209/272 (76.84%), Query Frame = 0
Query: 20 GFNFDNYARNASLPTETTMHLPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQGHVSAALVLGGVDSSGAHLYQIYPHGSTDKNPYVTMGSGSLAAMSVFETGFKEDMTEAEAIELVKEAILAGIYNDLGSGSNVDLTIIRRNG---EVTVLRGYLTPNDVEPLRTSYKRPAALSVPAGATAVLSTHMDPARPGLEGLVIEDATAM 288
GF+F+N RN L + + AMKTGTTI G+ +KDGVVLGADTR+TGGT V DKNCEKIHY+APNIYCCGAGTAADTE TT +ISSQL+L RL+T + SRVVTA T+LK+MLFRYQGH+SAALVLGGVD++G HLY +YPHGSTDK PYVTMGSGSLAAM+ FE G+K+DMTE EA LV++AILAG++NDLGSGSNVD+TII++ EV + PN+V LR KR +P GATAVL + + RP LV+E+AT M
Sbjct: 24 GFDFENCERNKRLLQNGNLTI-KAMKTGTTICGIVYKDGVVLGADTRSTGGTIVMDKNCEKIHYIAPNIYCCGAGTAADTENTTALISSQLELHRLNTNTESRVVTAMTLLKQMLFRYQGHISAALVLGGVDATGPHLYTVYPHGSTDKLPYVTMGSGSLAAMATFEQGYKDDMTEEEAKRLVQDAILAGVFNDLGSGSNVDITIIKKGPTGVEVVQDINSIKPNEVSQLRDQVKRNIVTDIPRGATAVLKSSFEKFRP---ELVVEEATPM 291
BLAST of EWM24068.1 vs. NCBI_GenBank
Match: gi|675205741|ref|XP_008911755.1| (hypothetical protein PPTG_16154 [Phytophthora parasitica INRA-310] >gi|566014550|gb|ETI37461.1| hypothetical protein F443_16551 [Phytophthora parasitica P1569] >gi|567952000|gb|ETK77684.1| hypothetical protein L915_16079 [Phytophthora parasitica] >gi|567980677|gb|ETL31130.1| hypothetical protein L916_15971 [Phytophthora parasitica] >gi|568010193|gb|ETL84383.1| hypothetical protein L917_15771 [Phytophthora parasitica] >gi|568040086|gb|ETM37553.1| hypothetical protein L914_15907 [Phytophthora parasitica] >gi|568088349|gb|ETN03211.1| hypothetical protein PPTG_16154 [Phytophthora parasitica INRA-310] >gi|570318289|gb|ETO66237.1| hypothetical protein F444_16526 [Phytophthora parasitica P1976] >gi|570942065|gb|ETP07322.1| hypothetical protein F441_16365 [Phytophthora parasitica CJ01A1] >gi|570972589|gb|ETP35395.1| hypothetical protein F442_16389 [Phytophthora parasitica P10297]) HSP 1 Score: 343.584 bits (880), Expect = 1.495e-115 Identity = 179/275 (65.09%), Postives = 215/275 (78.18%), Query Frame = 0
Query: 20 GFNFDNYARNASLPTETT-MHLPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQGHVSAALVLGGVDSSGAHLYQIYPHGSTDKNPYVTMGSGSLAAMSVFETGFKEDMTEAEAIELVKEAILAGIYNDLGSGSNVDLTIIRR-NGEVTVLRGY--LTPNDVEPLRTSYKRPAALSVPAGATAVLS--THMDPARPGLEGLVIEDATAM 288
GFNFDN RN L +++ A KTGTTI GV +KDGVVLGADTR+TGG+ V DKNCEKIHY+APNIYCCGAGTAADTE TT +ISSQL+L RL+T + SRVVTA T+LKRMLF+YQG+VSAALVLGGVD +G HLY IYPHGSTDK P+VTMGSGSLAAMSVFE G+K+DMTE EA +LV+EAILAGI+NDLGSGSNVD+T I++ NG+V V++ + + PN+V LR+ R +P GAT VLS T + PA +V+E+AT M
Sbjct: 24 GFNFDNCRRNELLLSQSGGKQKLKATKTGTTIVGVVYKDGVVLGADTRSTGGSIVMDKNCEKIHYIAPNIYCCGAGTAADTENTTALISSQLELHRLNTDTQSRVVTAMTLLKRMLFQYQGYVSAALVLGGVDVTGPHLYTIYPHGSTDKLPFVTMGSGSLAAMSVFEHGYKDDMTEDEAKKLVQEAILAGIFNDLGSGSNVDVTTIKKVNGKVEVVKEFNCIKPNEVSELRSQINRDIVTHIPRGATHVLSSKTELFPAN-----IVVEEATPM 293
BLAST of EWM24068.1 vs. NCBI_GenBank
Match: gi|635370598|emb|CCI41188.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 341.273 bits (874), Expect = 9.386e-115 Identity = 174/275 (63.27%), Postives = 209/275 (76.00%), Query Frame = 0
Query: 20 GFNFDNYARNASLPTETTMHLPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVA---DKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQGHVSAALVLGGVDSSGAHLYQIYPHGSTDKNPYVTMGSGSLAAMSVFETGFKEDMTEAEAIELVKEAILAGIYNDLGSGSNVDLTIIRRNG---EVTVLRGYLTPNDVEPLRTSYKRPAALSVPAGATAVLSTHMDPARPGLEGLVIEDATAM 288
GF+F+N RN L + + AMKTGTTI G+ +KDGVVLGADTR+TGGT V DKNCEKIHY+APNIYCCGAGTAADTE TT +ISSQL+L RL+T + SRVVTA T+LK+MLFRYQGH+SAALVLGGVD++G HLY +YPHGSTDK PYVTMGSGSLAAM+ FE G+K+DMTE EA LV++AILAG++NDLGSGSNVD+TII++ EV + PN+V LR KR +P GATAVL + + RP LV+E+AT M
Sbjct: 24 GFDFENCERNKRLLQNGNLTI-KAMKTGTTICGIVYKDGVVLGADTRSTGGTIVCLVMDKNCEKIHYIAPNIYCCGAGTAADTENTTALISSQLELHRLNTNTESRVVTAMTLLKQMLFRYQGHISAALVLGGVDATGPHLYTVYPHGSTDKLPYVTMGSGSLAAMATFEQGYKDDMTEEEAKRLVQDAILAGVFNDLGSGSNVDITIIKKGPTGVEVVQDINSIKPNEVSQLRDQVKRNIVTDIPRGATAVLKSSFEKFRP---ELVVEEATPM 294
BLAST of EWM24068.1 vs. NCBI_GenBank
Match: gi|953486539|emb|CEG49442.1| (20s proteasome subunit beta 2 [Plasmopara halstedii]) HSP 1 Score: 338.576 bits (867), Expect = 1.084e-113 Identity = 175/273 (64.10%), Postives = 213/273 (78.02%), Query Frame = 0
Query: 20 GFNFDNYARNASLPTETT-MHLPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQGHVSAALVLGGVDSSGAHLYQIYPHGSTDKNPYVTMGSGSLAAMSVFETGFKEDMTEAEAIELVKEAILAGIYNDLGSGSNVDLTIIRR-NGEVTVLR--GYLTPNDVEPLRTSYKRPAALSVPAGATAVLSTHMDPARPGLEGLVIEDATAM 288
GFNFDN RN L +++ A KTGTTI GV +K+GVVLGADTR+TGG+ V DKNCEKIHY+APNIYCCGAGTAADTE TT +ISSQL+L RL+T + SRVVTA T+LK+MLF+YQGH+SAALVLGGVD +G HLY IYPHGSTDK P+VTMGSGSLAAMSVFE G+K+DMTE EA LV+EAILAGI+NDLGSGSNVD+T I++ +G+V V++ + PN+V LR+ R +P GAT VLS+ +P P +V+E+AT M
Sbjct: 24 GFNFDNCRRNELLLSQSGGKQKLKATKTGTTIVGVVYKNGVVLGADTRSTGGSIVMDKNCEKIHYIAPNIYCCGAGTAADTENTTALISSQLELHRLNTDTQSRVVTAMTLLKKMLFQYQGHISAALVLGGVDVTGPHLYTIYPHGSTDKLPFVTMGSGSLAAMSVFEHGYKDDMTEDEAKSLVQEAILAGIFNDLGSGSNVDVTTIKKVSGKVEVVKEINCIKPNEVSELRSQINRDIVTHIPRGATLVLSSKTEPF-PA--DIVVEEATPM 293 The following BLAST results are available for this feature:
BLAST of EWM24068.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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