EWM24068.1, cds6599 (CDS) Nannochloropsis gaditana

Overview
NameEWM24068.1
Unique Namecds6599
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:85343..85468 -
Alignment locationCM002469.1:84955..85148 -
Alignment locationCM002469.1:84538..84802 -
Alignment locationCM002469.1:84095..84382 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24068.1
Product26s proteasome beta type 7 subunit
Orig transcript idgnl|cribi|Naga_100063g4.3893.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:85343..85468 -
CM002469.1supercontigCM002469.1:84955..85148 -
CM002469.1supercontigCM002469.1:84538..84802 -
CM002469.1supercontigCM002469.1:84095..84382 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004298threonine-type endopeptidase activity
GO:0004175endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009056catabolic process
GO:0019538protein metabolic process
GO:0051603proteolysis involved in cellular protein catabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005634nucleus
GO:0005839proteasome core complex
Vocabulary: INTERPRO
TermDefinition
IPR023333Proteasome_suB-type
IPR016050Proteasome_bsu_CS
IPR029055Ntn_hydrolases_N
IPR001353Proteasome_sua/b
IPR000243Pept_T1A_subB
Homology
BLAST of EWM24068.1 vs. NCBI_GenBank
Match: gi|553194922|ref|XP_005856053.1| (20S proteasome subunit beta 2 [Nannochloropsis gaditana CCMP526] >gi|422292999|gb|EKU20300.1| 20S proteasome subunit beta 2 [Nannochloropsis gaditana CCMP526] >gi|585105360|gb|EWM24068.1| 26s proteasome beta type 7 subunit [Nannochloropsis gaditana])

HSP 1 Score: 595.119 bits (1533), Expect = 0.000e+0
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0
Query:    1 MHGESGKQSLRGALKEDVPGFNFDNYARNASLPTETTMHLPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQGHVSAALVLGGVDSSGAHLYQIYPHGSTDKNPYVTMGSGSLAAMSVFETGFKEDMTEAEAIELVKEAILAGIYNDLGSGSNVDLTIIRRNGEVTVLRGYLTPNDVEPLRTSYKRPAALSVPAGATAVLSTHMDPARPGLEGLVIEDATAMTF 290
            MHGESGKQSLRGALKEDVPGFNFDNYARNASLPTETTMHLPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQGHVSAALVLGGVDSSGAHLYQIYPHGSTDKNPYVTMGSGSLAAMSVFETGFKEDMTEAEAIELVKEAILAGIYNDLGSGSNVDLTIIRRNGEVTVLRGYLTPNDVEPLRTSYKRPAALSVPAGATAVLSTHMDPARPGLEGLVIEDATAMTF
Sbjct:    1 MHGESGKQSLRGALKEDVPGFNFDNYARNASLPTETTMHLPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQGHVSAALVLGGVDSSGAHLYQIYPHGSTDKNPYVTMGSGSLAAMSVFETGFKEDMTEAEAIELVKEAILAGIYNDLGSGSNVDLTIIRRNGEVTVLRGYLTPNDVEPLRTSYKRPAALSVPAGATAVLSTHMDPARPGLEGLVIEDATAMTF 290          
BLAST of EWM24068.1 vs. NCBI_GenBank
Match: gi|298709136|emb|CBJ31081.1| (26S proteasome beta type 7 subunit [Ectocarpus siliculosus])

HSP 1 Score: 389.423 bits (999), Expect = 1.452e-133
Identity = 198/294 (67.35%), Postives = 227/294 (77.21%), Query Frame = 0
Query:    8 QSLRGALKEDV----------PGFNFDNYARNASLPTETTMH-----LPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQGHVSAALVLGGVDSSGAHLYQIYPHGSTDKNPYVTMGSGSLAAMSVFETGFKEDMTEAEAIELVKEAILAGIYNDLGSGSNVDLTIIRRNGEVTVLRGYLTPNDVEPLRTSYKRPAALSVPAGATAVLSTHMDPARPGLEGLV-IEDA 285
            QS+   L+E+V           GF+F+N+ RNA +  E         LP A  TGTTI G  +K GVVLGADTRATGGTEV DKNCEKIHYLAPNIYCCGAGTAADTEKTTEMIS QLDLLRLSTG+ SRVVTACTMLKRMLFRYQG+VSAALVLGGVD +G HLY IYPHGS+DK PY+TMGSGSLAAMSVFETGFKEDM EAEA+ELVK+AI+AG++NDLGSGSNVD+T+IR  GE  + RG   PN+V  LR + +RPAA+ VP GAT +L++   P    L  LV +EDA
Sbjct:   12 QSVPADLREEVLSASTTNAGGGGFDFENHHRNARIAAELAKSGKEGTLPRAKLTGTTICGCIYKGGVVLGADTRATGGTEVVDKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISGQLDLLRLSTGTQSRVVTACTMLKRMLFRYQGYVSAALVLGGVDVTGPHLYNIYPHGSSDKLPYLTMGSGSLAAMSVFETGFKEDMEEAEAVELVKQAIMAGVFNDLGSGSNVDVTVIRPGGETAIFRGLEKPNEVSELRKTVERPAAIKVPKGATEILASKFQP----LSSLVTVEDA 301          
BLAST of EWM24068.1 vs. NCBI_GenBank
Match: gi|676393803|ref|XP_009040179.1| (hypothetical protein AURANDRAFT_69937 [Aureococcus anophagefferens] >gi|323449160|gb|EGB05050.1| hypothetical protein AURANDRAFT_69937 [Aureococcus anophagefferens])

HSP 1 Score: 355.525 bits (911), Expect = 1.410e-120
Identity = 177/250 (70.80%), Postives = 199/250 (79.60%), Query Frame = 0
Query:   20 GFNFDNYARNASLPTETTMH-LPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQGHVSAALVLGGVDSSGAHLYQIYPHGSTDKNPYVTMGSGSLAAMSVFETGFKEDMTEAEAIELVKEAILAGIYNDLGSGSNVDLTIIRRNGEVTVLRGYLTPNDVEPLRTSYKRPAALSVPAGATAVLST 268
            GF+F   ARN  +        +P  M TGTTI G+ +  G+VLGADTRAT G+EVADKNCEKIHYLAPNIYCCGAGTAADTEKTTE+I+SQL+LLRLSTG+ SRVV A T+LKRMLF+YQGH+ AALVLGGVD +G  LYQIYPHGST K PYVTMGSGSLAAMSVFET +K+ M EA A+ LVK AI AGI+NDLGSGSNVD+TIIR  G   V+RGY TPND  PLR +Y RP AL  PA ATAVLST
Sbjct:   18 GFDFGMTARNEQIAAAAGGRPMPQPMSTGTTICGMVYDGGIVLGADTRATAGSEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTELIASQLELLRLSTGTQSRVVAAVTLLKRMLFKYQGHIGAALVLGGVDCTGPGLYQIYPHGSTSKLPYVTMGSGSLAAMSVFETEYKDGMDEAGAVALVKNAIRAGIFNDLGSGSNVDVTIIRAGGASEVIRGYETPNDTAPLRAAYARPKALIPPAAATAVLST 267          
BLAST of EWM24068.1 vs. NCBI_GenBank
Match: gi|325182083|emb|CCA16537.1| (proteasome subunit beta type7 putative [Albugo laibachii Nc14])

HSP 1 Score: 351.288 bits (900), Expect = 2.451e-118
Identity = 178/272 (65.44%), Postives = 213/272 (78.31%), Query Frame = 0
Query:   20 GFNFDNYARNASLPTETTMHLPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQGHVSAALVLGGVDSSGAHLYQIYPHGSTDKNPYVTMGSGSLAAMSVFETGFKEDMTEAEAIELVKEAILAGIYNDLGSGSNVDLTIIRR--NG-EVTVLRGYLTPNDVEPLRTSYKRPAALSVPAGATAVLSTHMDPARPGLEGLVIEDATAM 288
            GF+F N  RN  L  +  + +  AMKTGTTI GV +KDGVVLGADTR+TGGT V DKNCEKIHY+APNIYCCGAGTAADTE TT +ISSQL+L RL+T + SRVVTA T+LK+MLFRYQGH+SAALVLGGVD++G HLY +YPHGSTDK PYVTMGSGSLAAMS+FE G+K+DMTE EA +LV++AILAG++NDLGSGSNVD+TII++  NG EV      + PN+V  LR   KR     +P GATAVL +  +  RP    LV+E+AT M
Sbjct:   51 GFDFQNCERNKRLMQDGNLTI-KAMKTGTTICGVVYKDGVVLGADTRSTGGTIVMDKNCEKIHYIAPNIYCCGAGTAADTENTTALISSQLELHRLNTNTESRVVTAMTLLKQMLFRYQGHISAALVLGGVDATGPHLYTVYPHGSTDKLPYVTMGSGSLAAMSMFEQGYKDDMTEEEAKKLVQDAILAGVFNDLGSGSNVDITIIKKGPNGVEVVQDINSIKPNEVSQLRDQVKRNIVTDIPRGATAVLKSTFEKFRP---ELVVEEATPM 318          
BLAST of EWM24068.1 vs. NCBI_GenBank
Match: gi|325182082|emb|CCA16536.1| (proteasome subunit beta type7 putative [Albugo laibachii Nc14])

HSP 1 Score: 350.903 bits (899), Expect = 2.476e-118
Identity = 178/272 (65.44%), Postives = 213/272 (78.31%), Query Frame = 0
Query:   20 GFNFDNYARNASLPTETTMHLPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQGHVSAALVLGGVDSSGAHLYQIYPHGSTDKNPYVTMGSGSLAAMSVFETGFKEDMTEAEAIELVKEAILAGIYNDLGSGSNVDLTIIRR--NG-EVTVLRGYLTPNDVEPLRTSYKRPAALSVPAGATAVLSTHMDPARPGLEGLVIEDATAM 288
            GF+F N  RN  L  +  + +  AMKTGTTI GV +KDGVVLGADTR+TGGT V DKNCEKIHY+APNIYCCGAGTAADTE TT +ISSQL+L RL+T + SRVVTA T+LK+MLFRYQGH+SAALVLGGVD++G HLY +YPHGSTDK PYVTMGSGSLAAMS+FE G+K+DMTE EA +LV++AILAG++NDLGSGSNVD+TII++  NG EV      + PN+V  LR   KR     +P GATAVL +  +  RP    LV+E+AT M
Sbjct:   42 GFDFQNCERNKRLMQDGNLTI-KAMKTGTTICGVVYKDGVVLGADTRSTGGTIVMDKNCEKIHYIAPNIYCCGAGTAADTENTTALISSQLELHRLNTNTESRVVTAMTLLKQMLFRYQGHISAALVLGGVDATGPHLYTVYPHGSTDKLPYVTMGSGSLAAMSMFEQGYKDDMTEEEAKKLVQDAILAGVFNDLGSGSNVDITIIKKGPNGVEVVQDINSIKPNEVSQLRDQVKRNIVTDIPRGATAVLKSTFEKFRP---ELVVEEATPM 309          
BLAST of EWM24068.1 vs. NCBI_GenBank
Match: gi|325182084|emb|CCA16538.1| (proteasome subunit beta type7 putative [Albugo laibachii Nc14])

HSP 1 Score: 351.288 bits (900), Expect = 2.684e-118
Identity = 178/272 (65.44%), Postives = 213/272 (78.31%), Query Frame = 0
Query:   20 GFNFDNYARNASLPTETTMHLPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQGHVSAALVLGGVDSSGAHLYQIYPHGSTDKNPYVTMGSGSLAAMSVFETGFKEDMTEAEAIELVKEAILAGIYNDLGSGSNVDLTIIRR--NG-EVTVLRGYLTPNDVEPLRTSYKRPAALSVPAGATAVLSTHMDPARPGLEGLVIEDATAM 288
            GF+F N  RN  L  +  + +  AMKTGTTI GV +KDGVVLGADTR+TGGT V DKNCEKIHY+APNIYCCGAGTAADTE TT +ISSQL+L RL+T + SRVVTA T+LK+MLFRYQGH+SAALVLGGVD++G HLY +YPHGSTDK PYVTMGSGSLAAMS+FE G+K+DMTE EA +LV++AILAG++NDLGSGSNVD+TII++  NG EV      + PN+V  LR   KR     +P GATAVL +  +  RP    LV+E+AT M
Sbjct:   45 GFDFQNCERNKRLMQDGNLTI-KAMKTGTTICGVVYKDGVVLGADTRSTGGTIVMDKNCEKIHYIAPNIYCCGAGTAADTENTTALISSQLELHRLNTNTESRVVTAMTLLKQMLFRYQGHISAALVLGGVDATGPHLYTVYPHGSTDKLPYVTMGSGSLAAMSMFEQGYKDDMTEEEAKKLVQDAILAGVFNDLGSGSNVDITIIKKGPNGVEVVQDINSIKPNEVSQLRDQVKRNIVTDIPRGATAVLKSTFEKFRP---ELVVEEATPM 312          
BLAST of EWM24068.1 vs. NCBI_GenBank
Match: gi|635370599|emb|CCI41189.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 346.665 bits (888), Expect = 8.505e-117
Identity = 174/272 (63.97%), Postives = 209/272 (76.84%), Query Frame = 0
Query:   20 GFNFDNYARNASLPTETTMHLPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQGHVSAALVLGGVDSSGAHLYQIYPHGSTDKNPYVTMGSGSLAAMSVFETGFKEDMTEAEAIELVKEAILAGIYNDLGSGSNVDLTIIRRNG---EVTVLRGYLTPNDVEPLRTSYKRPAALSVPAGATAVLSTHMDPARPGLEGLVIEDATAM 288
            GF+F+N  RN  L     + +  AMKTGTTI G+ +KDGVVLGADTR+TGGT V DKNCEKIHY+APNIYCCGAGTAADTE TT +ISSQL+L RL+T + SRVVTA T+LK+MLFRYQGH+SAALVLGGVD++G HLY +YPHGSTDK PYVTMGSGSLAAM+ FE G+K+DMTE EA  LV++AILAG++NDLGSGSNVD+TII++     EV      + PN+V  LR   KR     +P GATAVL +  +  RP    LV+E+AT M
Sbjct:   24 GFDFENCERNKRLLQNGNLTI-KAMKTGTTICGIVYKDGVVLGADTRSTGGTIVMDKNCEKIHYIAPNIYCCGAGTAADTENTTALISSQLELHRLNTNTESRVVTAMTLLKQMLFRYQGHISAALVLGGVDATGPHLYTVYPHGSTDKLPYVTMGSGSLAAMATFEQGYKDDMTEEEAKRLVQDAILAGVFNDLGSGSNVDITIIKKGPTGVEVVQDINSIKPNEVSQLRDQVKRNIVTDIPRGATAVLKSSFEKFRP---ELVVEEATPM 291          
BLAST of EWM24068.1 vs. NCBI_GenBank
Match: gi|675205741|ref|XP_008911755.1| (hypothetical protein PPTG_16154 [Phytophthora parasitica INRA-310] >gi|566014550|gb|ETI37461.1| hypothetical protein F443_16551 [Phytophthora parasitica P1569] >gi|567952000|gb|ETK77684.1| hypothetical protein L915_16079 [Phytophthora parasitica] >gi|567980677|gb|ETL31130.1| hypothetical protein L916_15971 [Phytophthora parasitica] >gi|568010193|gb|ETL84383.1| hypothetical protein L917_15771 [Phytophthora parasitica] >gi|568040086|gb|ETM37553.1| hypothetical protein L914_15907 [Phytophthora parasitica] >gi|568088349|gb|ETN03211.1| hypothetical protein PPTG_16154 [Phytophthora parasitica INRA-310] >gi|570318289|gb|ETO66237.1| hypothetical protein F444_16526 [Phytophthora parasitica P1976] >gi|570942065|gb|ETP07322.1| hypothetical protein F441_16365 [Phytophthora parasitica CJ01A1] >gi|570972589|gb|ETP35395.1| hypothetical protein F442_16389 [Phytophthora parasitica P10297])

HSP 1 Score: 343.584 bits (880), Expect = 1.495e-115
Identity = 179/275 (65.09%), Postives = 215/275 (78.18%), Query Frame = 0
Query:   20 GFNFDNYARNASLPTETT-MHLPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQGHVSAALVLGGVDSSGAHLYQIYPHGSTDKNPYVTMGSGSLAAMSVFETGFKEDMTEAEAIELVKEAILAGIYNDLGSGSNVDLTIIRR-NGEVTVLRGY--LTPNDVEPLRTSYKRPAALSVPAGATAVLS--THMDPARPGLEGLVIEDATAM 288
            GFNFDN  RN  L +++       A KTGTTI GV +KDGVVLGADTR+TGG+ V DKNCEKIHY+APNIYCCGAGTAADTE TT +ISSQL+L RL+T + SRVVTA T+LKRMLF+YQG+VSAALVLGGVD +G HLY IYPHGSTDK P+VTMGSGSLAAMSVFE G+K+DMTE EA +LV+EAILAGI+NDLGSGSNVD+T I++ NG+V V++ +  + PN+V  LR+   R     +P GAT VLS  T + PA      +V+E+AT M
Sbjct:   24 GFNFDNCRRNELLLSQSGGKQKLKATKTGTTIVGVVYKDGVVLGADTRSTGGSIVMDKNCEKIHYIAPNIYCCGAGTAADTENTTALISSQLELHRLNTDTQSRVVTAMTLLKRMLFQYQGYVSAALVLGGVDVTGPHLYTIYPHGSTDKLPFVTMGSGSLAAMSVFEHGYKDDMTEDEAKKLVQEAILAGIFNDLGSGSNVDVTTIKKVNGKVEVVKEFNCIKPNEVSELRSQINRDIVTHIPRGATHVLSSKTELFPAN-----IVVEEATPM 293          
BLAST of EWM24068.1 vs. NCBI_GenBank
Match: gi|635370598|emb|CCI41188.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 341.273 bits (874), Expect = 9.386e-115
Identity = 174/275 (63.27%), Postives = 209/275 (76.00%), Query Frame = 0
Query:   20 GFNFDNYARNASLPTETTMHLPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVA---DKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQGHVSAALVLGGVDSSGAHLYQIYPHGSTDKNPYVTMGSGSLAAMSVFETGFKEDMTEAEAIELVKEAILAGIYNDLGSGSNVDLTIIRRNG---EVTVLRGYLTPNDVEPLRTSYKRPAALSVPAGATAVLSTHMDPARPGLEGLVIEDATAM 288
            GF+F+N  RN  L     + +  AMKTGTTI G+ +KDGVVLGADTR+TGGT V    DKNCEKIHY+APNIYCCGAGTAADTE TT +ISSQL+L RL+T + SRVVTA T+LK+MLFRYQGH+SAALVLGGVD++G HLY +YPHGSTDK PYVTMGSGSLAAM+ FE G+K+DMTE EA  LV++AILAG++NDLGSGSNVD+TII++     EV      + PN+V  LR   KR     +P GATAVL +  +  RP    LV+E+AT M
Sbjct:   24 GFDFENCERNKRLLQNGNLTI-KAMKTGTTICGIVYKDGVVLGADTRSTGGTIVCLVMDKNCEKIHYIAPNIYCCGAGTAADTENTTALISSQLELHRLNTNTESRVVTAMTLLKQMLFRYQGHISAALVLGGVDATGPHLYTVYPHGSTDKLPYVTMGSGSLAAMATFEQGYKDDMTEEEAKRLVQDAILAGVFNDLGSGSNVDITIIKKGPTGVEVVQDINSIKPNEVSQLRDQVKRNIVTDIPRGATAVLKSSFEKFRP---ELVVEEATPM 294          
BLAST of EWM24068.1 vs. NCBI_GenBank
Match: gi|953486539|emb|CEG49442.1| (20s proteasome subunit beta 2 [Plasmopara halstedii])

HSP 1 Score: 338.576 bits (867), Expect = 1.084e-113
Identity = 175/273 (64.10%), Postives = 213/273 (78.02%), Query Frame = 0
Query:   20 GFNFDNYARNASLPTETT-MHLPSAMKTGTTIAGVTFKDGVVLGADTRATGGTEVADKNCEKIHYLAPNIYCCGAGTAADTEKTTEMISSQLDLLRLSTGSPSRVVTACTMLKRMLFRYQGHVSAALVLGGVDSSGAHLYQIYPHGSTDKNPYVTMGSGSLAAMSVFETGFKEDMTEAEAIELVKEAILAGIYNDLGSGSNVDLTIIRR-NGEVTVLR--GYLTPNDVEPLRTSYKRPAALSVPAGATAVLSTHMDPARPGLEGLVIEDATAM 288
            GFNFDN  RN  L +++       A KTGTTI GV +K+GVVLGADTR+TGG+ V DKNCEKIHY+APNIYCCGAGTAADTE TT +ISSQL+L RL+T + SRVVTA T+LK+MLF+YQGH+SAALVLGGVD +G HLY IYPHGSTDK P+VTMGSGSLAAMSVFE G+K+DMTE EA  LV+EAILAGI+NDLGSGSNVD+T I++ +G+V V++    + PN+V  LR+   R     +P GAT VLS+  +P  P    +V+E+AT M
Sbjct:   24 GFNFDNCRRNELLLSQSGGKQKLKATKTGTTIVGVVYKNGVVLGADTRSTGGSIVMDKNCEKIHYIAPNIYCCGAGTAADTENTTALISSQLELHRLNTDTQSRVVTAMTLLKKMLFQYQGHISAALVLGGVDVTGPHLYTIYPHGSTDKLPFVTMGSGSLAAMSVFEHGYKDDMTEDEAKSLVQEAILAGIFNDLGSGSNVDVTTIKKVSGKVEVVKEINCIKPNEVSELRSQINRDIVTHIPRGATLVLSSKTEPF-PA--DIVVEEATPM 293          
The following BLAST results are available for this feature:
BLAST of EWM24068.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|553194922|ref|XP_005856053.1|0.000e+0100.0020S proteasome subunit beta 2 [Nannochloropsis gad... [more]
gi|298709136|emb|CBJ31081.1|1.452e-13367.3526S proteasome beta type 7 subunit [Ectocarpus sil... [more]
gi|676393803|ref|XP_009040179.1|1.410e-12070.80hypothetical protein AURANDRAFT_69937 [Aureococcus... [more]
gi|325182083|emb|CCA16537.1|2.451e-11865.44proteasome subunit beta type7 putative [Albugo lai... [more]
gi|325182082|emb|CCA16536.1|2.476e-11865.44proteasome subunit beta type7 putative [Albugo lai... [more]
gi|325182084|emb|CCA16538.1|2.684e-11865.44proteasome subunit beta type7 putative [Albugo lai... [more]
gi|635370599|emb|CCI41189.1|8.505e-11763.97unnamed protein product [Albugo candida][more]
gi|675205741|ref|XP_008911755.1|1.495e-11565.09hypothetical protein PPTG_16154 [Phytophthora para... [more]
gi|635370598|emb|CCI41188.1|9.386e-11563.27unnamed protein product [Albugo candida][more]
gi|953486539|emb|CEG49442.1|1.084e-11364.1020s proteasome subunit beta 2 [Plasmopara halstedi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6615rna6615Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications