EWM24081.1, cds6592 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24081.1 vs. NCBI_GenBank
Match: gi|585105377|gb|EWM24081.1| (delta-1-pyrroline-5-carboxylate dehydrogenase 1 protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 618.616 bits (1594), Expect = 0.000e+0 Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0
Query: 1 GTSLPPSLPPSLPLFLLPSPFPSLPLSLPHLPPFLFSSLFLFLSVLPPLLSICSDPVSSSLPPSRPPAPPPSRRSPSHTGQKCSAQSILFAHENWQQAGLESKLRTLAARRSLADFTLGPVLTVTTERFLAHCQALLDTIPGTKILWGGKALSKAAMAPHEIPTCYGAFEPTAVYVPLEGMLASPDAFHLATTEIFGPFYIYTTWKDGELPLVLEALERMENHLTAAVVSNDVVFTRAVVGSTVNGTTYIGRRARTTGAPQNHWFGPCGDPRGAGIGTPEAIKSVWSAHREVVTDEGPVGEGWTMPGPT 309
GTSLPPSLPPSLPLFLLPSPFPSLPLSLPHLPPFLFSSLFLFLSVLPPLLSICSDPVSSSLPPSRPPAPPPSRRSPSHTGQKCSAQSILFAHENWQQAGLESKLRTLAARRSLADFTLGPVLTVTTERFLAHCQALLDTIPGTKILWGGKALSKAAMAPHEIPTCYGAFEPTAVYVPLEGMLASPDAFHLATTEIFGPFYIYTTWKDGELPLVLEALERMENHLTAAVVSNDVVFTRAVVGSTVNGTTYIGRRARTTGAPQNHWFGPCGDPRGAGIGTPEAIKSVWSAHREVVTDEGPVGEGWTMPGPT
Sbjct: 1 GTSLPPSLPPSLPLFLLPSPFPSLPLSLPHLPPFLFSSLFLFLSVLPPLLSICSDPVSSSLPPSRPPAPPPSRRSPSHTGQKCSAQSILFAHENWQQAGLESKLRTLAARRSLADFTLGPVLTVTTERFLAHCQALLDTIPGTKILWGGKALSKAAMAPHEIPTCYGAFEPTAVYVPLEGMLASPDAFHLATTEIFGPFYIYTTWKDGELPLVLEALERMENHLTAAVVSNDVVFTRAVVGSTVNGTTYIGRRARTTGAPQNHWFGPCGDPRGAGIGTPEAIKSVWSAHREVVTDEGPVGEGWTMPGPT 309
BLAST of EWM24081.1 vs. NCBI_GenBank
Match: gi|669152720|ref|XP_008611922.1| (aldehyde dehydrogenase [Saprolegnia diclina VS20] >gi|530736274|gb|EQC34516.1| aldehyde dehydrogenase [Saprolegnia diclina VS20]) HSP 1 Score: 304.679 bits (779), Expect = 1.276e-96 Identity = 147/231 (63.64%), Postives = 173/231 (74.89%), Query Frame = 0
Query: 79 TGQKCSAQSILFAHENWQQAGLESKLRTLAARRSLADFTLGPVLTVTTERFLAHCQALLDTIPGTKILWGGKALSKAAMAPHEIPTCYGAFEPTAVYVPLEGMLASPDAFHLATTEIFGPFYIYTTWKDGELPLVLEALERMENHLTAAVVSNDVVFTRAVVGSTVNGTTYIGRRARTTGAPQNHWFGPCGDPRGAGIGTPEAIKSVWSAHREVVTDEGPVGEGWTMPGPT 309
+GQKCSAQSILF HENW +AG+E+KL+TLAARR+L + T+GPVLTVTT+R L H LL IPG ++++GGK L H IP+CYGA EPTAVYVPL A P+ F L TTEIFGPF I T +KDGE+ VL LERME HLTA+VVSND+ F + ++ +TVNGTTY G RARTTGAPQNHWFGP GDPR IGTPEAIK VWS HRE++ D GP+ WT P T
Sbjct: 324 SGQKCSAQSILFMHENWTKAGIEAKLKTLAARRNLDELTIGPVLTVTTKRMLDHVDNLL-KIPGARVVFGGKELKN-----HSIPSCYGAIEPTAVYVPL-AEAAKPENFELVTTEIFGPFQILTEYKDGEVDTVLNMLERMEAHLTASVVSNDIGFQQHILANTVNGTTYNGIRARTTGAPQNHWFGPAGDPRAGAIGTPEAIKLVWSCHREIINDFGPINTSWTTPKAT 547
BLAST of EWM24081.1 vs. NCBI_GenBank
Match: gi|298712221|emb|CBJ33088.1| (Aldehyde Dehydrogenase [Ectocarpus siliculosus]) HSP 1 Score: 303.523 bits (776), Expect = 2.828e-96 Identity = 149/233 (63.95%), Postives = 178/233 (76.39%), Query Frame = 0
Query: 77 SHTGQKCSAQSILFAHENWQQAGLESKLRTLAARRSLADFTLGPVLTVTTERFLAHCQALLDTIPGTKILWGGKALSKAAMAPHEIPTCYGAFEPTAVYVPLEGMLASPDAFHLATTEIFGPFYIYTTWKDGELPLVLEALERMENHLTAAVVSNDVVFTRAVVGSTVNGTTYIGRRARTTGAPQNHWFGPCGDPRGAGIGTPEAIKSVWSAHREVVTDEGPVGEGWTMPGPT 309
+++GQKCSAQSILF HENW ++G+ L++LA+RR+L D T+GPVL+VTTE + H +LL I G K+L+GGK LS + +IP YGA++PTAV+VPL+ ML SP+ F L TTEIFGPF + T + D EL VLEA ERM NHLTAAVVSNDV F R V+ +TVNGTTY G RARTTGAPQNHWFGP GDPR AGIGT EAI+ VWS HREV+ DEGPV EGWT P T
Sbjct: 312 AYSGQKCSAQSILFVHENWSKSGILETLKSLASRRTLEDLTVGPVLSVTTETCMKHIDSLL-KISGAKVLFGGKPLS--SEKAKKIPAQYGAWDPTAVFVPLKEMLKSPENFALCTTEIFGPFQVVTEYDDNELDAVLEACERMNNHLTAAVVSNDVSFQRRVLEATVNGTTYCGIRARTTGAPQNHWFGPAGDPRAAGIGTIEAIRMVWSCHREVIMDEGPVPEGWTTPART 541
BLAST of EWM24081.1 vs. NCBI_GenBank
Match: gi|1040831233|ref|XP_017229939.1| (PREDICTED: delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial [Daucus carota subsp. sativus]) HSP 1 Score: 303.523 bits (776), Expect = 3.943e-96 Identity = 149/231 (64.50%), Postives = 178/231 (77.06%), Query Frame = 0
Query: 79 TGQKCSAQSILFAHENWQQAGLESKLRTLAARRSLADFTLGPVLTVTTERFLAHCQALLDTIPGTKILWGGKALSKAAMAPHEIPTCYGAFEPTAVYVPLEGMLASPDAFHLATTEIFGPFYIYTTWKDGELPLVLEALERMENHLTAAVVSNDVVFTRAVVGSTVNGTTYIGRRARTTGAPQNHWFGPCGDPRGAGIGTPEAIKSVWSAHREVVTDEGPVGEGWTMPGPT 309
+GQKCSAQS+LF HENW Q+ L +L LAARR L D T+GPVLTVTTER L H + LL IPG+K+L+GG+AL A H+IP+ YGA +PTAV+VPL+ +L + + L TTEIFGPF I T +KD +L +VL+A+ERM HLTAAVVSNDV+F + V+GSTVNGTTY G RARTTGAPQNHWFGP GDPRGAGIGTPEAIK VWS HREV+ D GP+ W +P T
Sbjct: 331 SGQKCSAQSMLFMHENWSQSSLVKQLGNLAARRKLEDLTIGPVLTVTTERMLEHLRKLL-KIPGSKLLFGGEAL-----ANHKIPSVYGAIKPTAVFVPLDEILKDGN-YELVTTEIFGPFQIVTEYKDNQLAMVLDAVERMHAHLTAAVVSNDVLFLQEVIGSTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREVIYDIGPMPTNWKLPAST 554
BLAST of EWM24081.1 vs. NCBI_GenBank
Match: gi|1072962049|ref|XP_018492000.1| (PREDICTED: delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial [Raphanus sativus]) HSP 1 Score: 303.523 bits (776), Expect = 5.027e-96 Identity = 148/231 (64.07%), Postives = 170/231 (73.59%), Query Frame = 0
Query: 79 TGQKCSAQSILFAHENWQQAGLESKLRTLAARRSLADFTLGPVLTVTTERFLAHCQALLDTIPGTKILWGGKALSKAAMAPHEIPTCYGAFEPTAVYVPLEGMLASPDAFHLATTEIFGPFYIYTTWKDGELPLVLEALERMENHLTAAVVSNDVVFTRAVVGSTVNGTTYIGRRARTTGAPQNHWFGPCGDPRGAGIGTPEAIKSVWSAHREVVTDEGPVGEGWTMPGPT 309
+GQKCSAQSILF HENW + L SKL+ LA RR L D T+GPVLT TTE L H + LL IPG+K+L+GGK L H IP+ YGA EPTAVYVP+E +L + L T EIFGPF I T +K +LPLVL+ALERM HLTAAVVSND +F + V+G+TVNGTTY G R RTTGAPQNHWFGP GDPRGAGIGTPEAIK VWS HREV+ D GP+ GW +P T
Sbjct: 333 SGQKCSAQSILFVHENWSKTSLLSKLKDLAGRRKLEDLTIGPVLTFTTEAMLEHMENLL-KIPGSKLLFGGKPLKN-----HSIPSIYGALEPTAVYVPIEEILKDSKTYELVTKEIFGPFQIVTEYKKDQLPLVLDALERMHAHLTAAVVSNDPIFIQEVIGNTVNGTTYAGLRGRTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREVIYDYGPIPHGWELPAST 557
BLAST of EWM24081.1 vs. NCBI_GenBank
Match: gi|1173933920|gb|OQR85456.1| (delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial-like [Achlya hypogyna]) HSP 1 Score: 302.753 bits (774), Expect = 6.863e-96 Identity = 145/231 (62.77%), Postives = 176/231 (76.19%), Query Frame = 0
Query: 79 TGQKCSAQSILFAHENWQQAGLESKLRTLAARRSLADFTLGPVLTVTTERFLAHCQALLDTIPGTKILWGGKALSKAAMAPHEIPTCYGAFEPTAVYVPLEGMLASPDAFHLATTEIFGPFYIYTTWKDGELPLVLEALERMENHLTAAVVSNDVVFTRAVVGSTVNGTTYIGRRARTTGAPQNHWFGPCGDPRGAGIGTPEAIKSVWSAHREVVTDEGPVGEGWTMPGPT 309
+GQKCSAQSILF HENW +AG+E+KL+TLAARR+L + T+GPVLTVTT+R L H LL IPG ++++GGK L A H+IP+CYGA EPTAV+VPLE A P+ F L TTEIFGPF + T +KD ++ VL+ LERME HLTA+VVSNDV F + ++ ++VNGTTY G RARTTGAPQNHWFGP GDPR IGTPEAIK VWS HRE++ D GP+ WT P T
Sbjct: 324 SGQKCSAQSILFMHENWTKAGIEAKLKTLAARRNLDELTIGPVLTVTTKRMLDHVDNLL-KIPGARLVFGGKEL-----ANHKIPSCYGAIEPTAVFVPLEEA-AKPENFELVTTEIFGPFQVLTEYKDSQVDTVLDMLERMEAHLTASVVSNDVAFQQHILANSVNGTTYNGIRARTTGAPQNHWFGPAGDPRAGAIGTPEAIKLVWSCHREIINDFGPINTSWTTPKAT 547
BLAST of EWM24081.1 vs. NCBI_GenBank
Match: gi|565430282|ref|XP_006279602.1| (hypothetical protein CARUB_v10026134mg, partial [Capsella rubella] >gi|482548306|gb|EOA12500.1| hypothetical protein CARUB_v10026134mg, partial [Capsella rubella]) HSP 1 Score: 303.523 bits (776), Expect = 9.434e-96 Identity = 149/231 (64.50%), Postives = 171/231 (74.03%), Query Frame = 0
Query: 79 TGQKCSAQSILFAHENWQQAGLESKLRTLAARRSLADFTLGPVLTVTTERFLAHCQALLDTIPGTKILWGGKALSKAAMAPHEIPTCYGAFEPTAVYVPLEGMLASPDAFHLATTEIFGPFYIYTTWKDGELPLVLEALERMENHLTAAVVSNDVVFTRAVVGSTVNGTTYIGRRARTTGAPQNHWFGPCGDPRGAGIGTPEAIKSVWSAHREVVTDEGPVGEGWTMPGPT 309
+GQKCSAQS+LF HENW + L SKL+ LA RR L D T+GPVLT TTE L H + LL IPG+K+L+GGK L H IP+ YGA EPTAVYVP+E +L + L T EIFGPF I T +K +LPLVLEALERM HLTAAVVSND +F + VVG++VNGTTY G R RTTGAPQNHWFGP GDPRGAGIGTPEAIK VWS HREV+ D GPV +GW +P T
Sbjct: 364 SGQKCSAQSMLFVHENWSKTPLLSKLKELAERRKLEDLTIGPVLTFTTEAMLEHMENLLQ-IPGSKLLFGGKELKN-----HSIPSIYGALEPTAVYVPIEEILKDSKTYELVTKEIFGPFQIVTEYKKDQLPLVLEALERMHAHLTAAVVSNDPIFIQEVVGNSVNGTTYAGLRGRTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREVIYDYGPVPKGWELPSST 588
BLAST of EWM24081.1 vs. NCBI_GenBank
Match: gi|1191011001|ref|XP_020889249.1| (delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 302.368 bits (773), Expect = 1.052e-95 Identity = 147/228 (64.47%), Postives = 170/228 (74.56%), Query Frame = 0
Query: 79 TGQKCSAQSILFAHENWQQAGLESKLRTLAARRSLADFTLGPVLTVTTERFLAHCQALLDTIPGTKILWGGKALSKAAMAPHEIPTCYGAFEPTAVYVPLEGMLASPDAFHLATTEIFGPFYIYTTWKDGELPLVLEALERMENHLTAAVVSNDVVFTRAVVGSTVNGTTYIGRRARTTGAPQNHWFGPCGDPRGAGIGTPEAIKSVWSAHREVVTDEGPVGEGWTMP 306
+GQKCSAQS+LF HENW + L SKL+ LA RR L D T+GPVLT TTE L H + LL IPG+K+L+GGK L H IP+ YGA EPTAVYVP+E +L + L T EIFGPF I T +K +LPLVLEALERM HLTAAVVSND +F + V+G++VNGTTY G R RTTGAPQNHWFGP GDPRGAGIGTPEAIK VWS HREV+ D GPV +GW +P
Sbjct: 332 SGQKCSAQSMLFVHENWSKTPLVSKLKELAERRKLEDLTIGPVLTFTTEAMLEHMENLLQ-IPGSKLLFGGKELKN-----HSIPSIYGALEPTAVYVPIEEILKDSKTYELVTKEIFGPFQIVTEYKKDQLPLVLEALERMHAHLTAAVVSNDPIFLQEVIGNSVNGTTYAGLRGRTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREVIYDYGPVPQGWELP 553
BLAST of EWM24081.1 vs. NCBI_GenBank
Match: gi|731335130|ref|XP_010678575.1| (PREDICTED: probable aldehyde dehydrogenase [Beta vulgaris subsp. vulgaris] >gi|870858912|gb|KMT10376.1| hypothetical protein BVRB_5g115070 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 302.368 bits (773), Expect = 1.063e-95 Identity = 150/228 (65.79%), Postives = 175/228 (76.75%), Query Frame = 0
Query: 79 TGQKCSAQSILFAHENWQQAGLESKLRTLAARRSLADFTLGPVLTVTTERFLAHCQALLDTIPGTKILWGGKALSKAAMAPHEIPTCYGAFEPTAVYVPLEGMLASPDAFHLATTEIFGPFYIYTTWKDGELPLVLEALERMENHLTAAVVSNDVVFTRAVVGSTVNGTTYIGRRARTTGAPQNHWFGPCGDPRGAGIGTPEAIKSVWSAHREVVTDEGPVGEGWTMP 306
+GQKCSAQSILF HENW Q+ L SKL+ LAARR L D T+GPVLTVTTE L H + LL IPG+K+L+GG+ L H IP+ YGAF+PTAVYVPLE ++ + F L T EIFGPF I T +K +L +VL+ALERM HLTAAVVSNDV+F + V+GS+VNGTTY G RARTTGAPQNHWFGP GDPRGAGIGTPEAIK VWS HRE++ D GPV WT+P
Sbjct: 331 SGQKCSAQSILFMHENWSQSPLISKLKDLAARRKLEDLTVGPVLTVTTEAMLEHVKKLL-KIPGSKLLFGGETLEN-----HSIPSVYGAFKPTAVYVPLEEIVKDKN-FELVTKEIFGPFQIITDYKANQLQMVLDALERMHAHLTAAVVSNDVLFLQEVIGSSVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDIGPVPHKWTVP 551
BLAST of EWM24081.1 vs. NCBI_GenBank
Match: gi|727426223|ref|XP_010458998.1| (PREDICTED: delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial [Camelina sativa]) HSP 1 Score: 302.368 bits (773), Expect = 1.319e-95 Identity = 147/228 (64.47%), Postives = 170/228 (74.56%), Query Frame = 0
Query: 79 TGQKCSAQSILFAHENWQQAGLESKLRTLAARRSLADFTLGPVLTVTTERFLAHCQALLDTIPGTKILWGGKALSKAAMAPHEIPTCYGAFEPTAVYVPLEGMLASPDAFHLATTEIFGPFYIYTTWKDGELPLVLEALERMENHLTAAVVSNDVVFTRAVVGSTVNGTTYIGRRARTTGAPQNHWFGPCGDPRGAGIGTPEAIKSVWSAHREVVTDEGPVGEGWTMP 306
+GQKCSAQS+LF HENW + L SKL+ LA RR L D T+GPVLT TTE L H + LL IPG+K+L+GGK L H IP+ YGA EPTAVYVP+E +L + L T EIFGPF I T +K +LPLVLEALERM HLTAAVVSND +F + V+G++VNGTTY G R RTTGAPQNHWFGP GDPRGAGIGTPEAIK VWS HREV+ D GPV +GW +P
Sbjct: 332 SGQKCSAQSMLFVHENWSKTPLVSKLKELAERRKLEDLTIGPVLTFTTEAMLEHMENLLQ-IPGSKLLFGGKELKN-----HSIPSVYGALEPTAVYVPIEEILKDSKTYELVTKEIFGPFQIVTEYKKDQLPLVLEALERMHAHLTAAVVSNDPIFLQEVIGNSVNGTTYAGLRGRTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREVIYDYGPVPQGWELP 553 The following BLAST results are available for this feature:
BLAST of EWM24081.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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