EWM30015.1, cds659 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30015.1 vs. NCBI_GenBank
Match: gi|585112637|gb|EWM30015.1| (dnaj heat shock n-terminal domain-containing [Nannochloropsis gaditana]) HSP 1 Score: 382.874 bits (982), Expect = 2.068e-134 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0 Query: 1 MNSTPTLSLYDILGVSPAASPSTIKRAYQSAARATHPDKAAAHSKGGCRARPGHVSSPRFTFLEIQAAWDVLRARESRAAYDAAWGRKRDEEVEGFIAEEVRVAEMEEEGGEEDGKERWLLYPCRCGDAFRVPKEEGRFLVGGTGSRETEEGGTEKVKMDRSGGGGGGQDGGAAVVVTCDGCSLRIRVRG 190 MNSTPTLSLYDILGVSPAASPSTIKRAYQSAARATHPDKAAAHSKGGCRARPGHVSSPRFTFLEIQAAWDVLRARESRAAYDAAWGRKRDEEVEGFIAEEVRVAEMEEEGGEEDGKERWLLYPCRCGDAFRVPKEEGRFLVGGTGSRETEEGGTEKVKMDRSGGGGGGQDGGAAVVVTCDGCSLRIRVRG Sbjct: 1 MNSTPTLSLYDILGVSPAASPSTIKRAYQSAARATHPDKAAAHSKGGCRARPGHVSSPRFTFLEIQAAWDVLRARESRAAYDAAWGRKRDEEVEGFIAEEVRVAEMEEEGGEEDGKERWLLYPCRCGDAFRVPKEEGRFLVGGTGSRETEEGGTEKVKMDRSGGGGGGQDGGAAVVVTCDGCSLRIRVRG 190
BLAST of EWM30015.1 vs. NCBI_GenBank
Match: gi|553181103|ref|XP_005853514.1| (hypothetical protein NGA_0483300, partial [Nannochloropsis gaditana CCMP526] >gi|422295547|gb|EKU22846.1| hypothetical protein NGA_0483300, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 240.35 bits (612), Expect = 3.780e-79 Identity = 117/119 (98.32%), Postives = 119/119 (100.00%), Query Frame = 0 Query: 1 MNSTPTLSLYDILGVSPAASPSTIKRAYQSAARATHPDKAAAHSKGGCRARPGHVSSPRFTFLEIQAAWDVLRARESRAAYDAAWGRKRDEEVEGFIAEEVRVAEMEEEGGEEDGKERW 119 MNSTPTLSLYDILGVSPAASPSTIKRAYQ+AARATHPDKAAAHSKGGCRARPGHVSSPRFTFLEIQAAWDVLRARESRAAYDAAWGR+RDEEVEGFIAEEVRVAEMEEEGGEEDGKERW Sbjct: 1 MNSTPTLSLYDILGVSPAASPSTIKRAYQAAARATHPDKAAAHSKGGCRARPGHVSSPRFTFLEIQAAWDVLRARESRAAYDAAWGRQRDEEVEGFIAEEVRVAEMEEEGGEEDGKERW 119
BLAST of EWM30015.1 vs. NCBI_GenBank
Match: gi|226504220|ref|NP_001142310.1| (uncharacterized LOC100274479 [Zea mays] >gi|194708154|gb|ACF88161.1| unknown [Zea mays]) HSP 1 Score: 92.0485 bits (227), Expect = 4.409e-20 Identity = 69/187 (36.90%), Postives = 96/187 (51.34%), Query Frame = 0 Query: 2 NSTPTLSLYDILGVSPAASPSTIKRAYQSAARATHPDKAAAHSKGGCRARPGHVSSPRFTFLEIQAAWDVLRARESRAAYDAAWGRKRDEEVEGFIAEEVRVAEMEEEGGEEDGKERWLLYPCRCGDAFRVPKEEGRFLVGGTGSRETEEGGTEKVKMDRSGGGGGGQDGGAAVVVTCDGCSLRIRV 188 N + +LY++L VS A+ I+ AY+SAA THPDKA + + P S+ + F +Q AW+VLR SRA YD R + +E IA E++V +M E LLYPCRCGD F + E + G G T +G E+V+ G G A+VV+ C CSL+IR+ Sbjct: 6 NISVQKTLYEVLSVSEDATYDEIRAAYRSAALNTHPDKAQTTLESS--SVP---STEQQEFSSVQKAWEVLRHPTSRAYYDKQLQSSR-QSIE-IIASEIQVGDMIVESA---AGALELLYPCRCGDYFSITSGE----LSGMGIVVTGDG--EEVE-----GLQASDSGSASVVLGCGSCSLKIRL 171
BLAST of EWM30015.1 vs. NCBI_GenBank
Match: gi|242044946|ref|XP_002460344.1| (DPH4 homolog [Sorghum bicolor] >gi|1205935224|ref|XP_021309514.1| DPH4 homolog [Sorghum bicolor] >gi|1174563791|gb|OQU89620.1| hypothetical protein SORBI_3002G227200 [Sorghum bicolor] >gi|1174563792|gb|OQU89621.1| hypothetical protein SORBI_3002G227200 [Sorghum bicolor]) HSP 1 Score: 91.6633 bits (226), Expect = 5.022e-20 Identity = 63/184 (34.24%), Postives = 86/184 (46.74%), Query Frame = 0 Query: 8 SLYDILGVSPAASPSTIKRAYQSAARATHPDKAAAHSKGGCRARPGHVSSPRFTFLEIQAAWDVLRARESRAAYDAAWGRKRDEEVEGFIAEEVRVAEMEEEGGEEDGKERWLLYPCRCGDAFRVPKEEGR---FLVGGTGSRETEEGGTEKVKMDRSGGGGGGQDGGAAVVVTCDGCSLRIRV 188 +LY++L VS A+ I+ AY+SAA THPDKA + SS + F +Q AW++LR SRA YD R + +E IA E+ V +M E LLYPCRCGD F + K E LV G G E + A++V+ C CSL+I++ Sbjct: 12 TLYEVLSVSEDATYDEIRAAYRSAALTTHPDKAHTTLESSVP------SSEQQEFFSVQKAWEILRHPTSRADYDKQLQSSR-QNIE-IIASEIEVGDMIIEST---ADTLVLLYPCRCGDYFSITKCELSGMGHLVSGDGEVELQ----------------ASDSASASIVLGCGSCSLKIKL 168
BLAST of EWM30015.1 vs. NCBI_GenBank
Match: gi|944238284|gb|KQL02622.1| (hypothetical protein SETIT_015799mg, partial [Setaria italica]) HSP 1 Score: 91.2781 bits (225), Expect = 1.172e-19 Identity = 64/181 (35.36%), Postives = 91/181 (50.28%), Query Frame = 0 Query: 8 SLYDILGVSPAASPSTIKRAYQSAARATHPDKAAAHSKGGCRARPGHVSSPRFTFLEIQAAWDVLRARESRAAYDAAWGRKRDEEVEGFIAEEVRVAEMEEEGGEEDGKERWLLYPCRCGDAFRVPKEEGRFLVGGTGSRETEEGGTEKVKMDRSGGGGGGQDGGAAVVVTCDGCSLRIRV 188 +LY++L VS A+ I+ AY+SAA THPD KG SS + FL +Q AW++LR SRA YD R + +E IA E+++ +M E + + LLYPCRCGD F + E +G G + +G E+ D S A VV+ C CSL++R+ Sbjct: 28 TLYEVLSVSEDATYGEIRAAYKSAALNTHPD------KGHMTLESSVPSSEQQEFLSVQRAWEILRHPASRADYDKQLQSSR-QNIE-IIASEIKIGDMIVESTADTVE---LLYPCRCGDYFSITSCE----LGDMGILVSGDGEVEQQASDSS---------SAFVVLGCGSCSLKVRL 184
BLAST of EWM30015.1 vs. NCBI_GenBank
Match: gi|514798085|ref|XP_004973988.1| (PREDICTED: DPH4 homolog isoform X1 [Setaria italica]) HSP 1 Score: 90.8929 bits (224), Expect = 3.991e-19 Identity = 64/181 (35.36%), Postives = 91/181 (50.28%), Query Frame = 0 Query: 8 SLYDILGVSPAASPSTIKRAYQSAARATHPDKAAAHSKGGCRARPGHVSSPRFTFLEIQAAWDVLRARESRAAYDAAWGRKRDEEVEGFIAEEVRVAEMEEEGGEEDGKERWLLYPCRCGDAFRVPKEEGRFLVGGTGSRETEEGGTEKVKMDRSGGGGGGQDGGAAVVVTCDGCSLRIRV 188 +LY++L VS A+ I+ AY+SAA THPD KG SS + FL +Q AW++LR SRA YD R + +E IA E+++ +M E + + LLYPCRCGD F + E +G G + +G E+ D S A VV+ C CSL++R+ Sbjct: 71 TLYEVLSVSEDATYGEIRAAYKSAALNTHPD------KGHMTLESSVPSSEQQEFLSVQRAWEILRHPASRADYDKQLQSSR-QNIE-IIASEIKIGDMIVESTADTVE---LLYPCRCGDYFSITSCE----LGDMGILVSGDGEVEQQASDSS---------SAFVVLGCGSCSLKVRL 227
BLAST of EWM30015.1 vs. NCBI_GenBank
Match: gi|573956967|ref|XP_006660706.1| (PREDICTED: DPH4 homolog [Oryza brachyantha]) HSP 1 Score: 88.9669 bits (219), Expect = 7.016e-19 Identity = 64/181 (35.36%), Postives = 87/181 (48.07%), Query Frame = 0 Query: 8 SLYDILGVSPAASPSTIKRAYQSAARATHPDKAAAHSKGGCRARPGHVSSPRFTFLEIQAAWDVLRARESRAAYDAAWGRKRDEEVEGFIAEEVRVAEMEEEGGEEDGKERWLLYPCRCGDAFRVPKEEGRFLVGGTGSRETEEGGTEKVKMDRSGGGGGGQDGGAAVVVTCDGCSLRIRV 188 +LY+IL V ++ I+ AY+SAA THPDKA P SS + FL +Q AW++LR +SRA YD R + +A E+ + +M E D E LLYPCRCGD F + E +G G E+G E D A+VV+ C CSL+ R+ Sbjct: 18 TLYEILSVGEHSTFDEIRAAYKSAALNTHPDKAQM------APNPLVSSSEQNEFLSVQKAWEILRYPKSRAEYDRQLQSSRQNLL--VVASEIEIDDMTVETT-ADAVE--LLYPCRCGDYFSITSHE----LGKIGISVREDGEMELQTSDSV---------PASVVLGCGSCSLKARL 174
BLAST of EWM30015.1 vs. NCBI_GenBank
Match: gi|1002298170|ref|XP_015612505.1| (PREDICTED: DPH4 homolog isoform X2 [Oryza sativa Japonica Group] >gi|1002298172|ref|XP_015612506.1| PREDICTED: DPH4 homolog isoform X2 [Oryza sativa Japonica Group] >gi|1002298174|ref|XP_015612507.1| PREDICTED: DPH4 homolog isoform X2 [Oryza sativa Japonica Group] >gi|51535265|dbj|BAD38528.1| DNAJ heat shock N-terminal domain-containing protein-like [Oryza sativa Japonica Group] >gi|51536221|dbj|BAD38392.1| DNAJ heat shock N-terminal domain-containing protein-like [Oryza sativa Japonica Group] >gi|113631618|dbj|BAF25299.1| Os09g0460000 [Oryza sativa Japonica Group] >gi|125605969|gb|EAZ45005.1| hypothetical protein OsJ_29646 [Oryza sativa Japonica Group] >gi|215678830|dbj|BAG95267.1| unnamed protein product [Oryza sativa Japonica Group] >gi|937933556|dbj|BAT08471.1| Os09g0460000 [Oryza sativa Japonica Group]) HSP 1 Score: 88.1965 bits (217), Expect = 1.139e-18 Identity = 62/181 (34.25%), Postives = 88/181 (48.62%), Query Frame = 0 Query: 8 SLYDILGVSPAASPSTIKRAYQSAARATHPDKAAAHSKGGCRARPGHVSSPRFTFLEIQAAWDVLRARESRAAYDAAWGRKRDEEVEGFIAEEVRVAEMEEEGGEEDGKERWLLYPCRCGDAFRVPKEEGRFLVGGTGSRETEEGGTEKVKMDRSGGGGGGQDGGAAVVVTCDGCSLRIRV 188 +LY++L V A+ I+ AY+SA THPDKA P SS R FL +Q AW++LR +SRA YD R + +E +A E+ + +M E + + LLYPCRCGD F + E +G G E+G E D ++VV+ C CSL+ R+ Sbjct: 12 TLYEVLSVRKDATYDEIRAAYKSAVLNTHPDKAQMA------LNPLVSSSERNEFLSVQKAWEILRYPKSRAEYDKQLQSSR-QNLE-IVATEIEIDDMIVESTADSVE---LLYPCRCGDYFSITSRE----LGQIGISVREDGEMELHTSD---------SVPSSVVLGCGSCSLKARL 168
BLAST of EWM30015.1 vs. NCBI_GenBank
Match: gi|1205923287|ref|XP_002466012.2| (DPH4 homolog [Sorghum bicolor] >gi|992282425|gb|KXG40388.1| hypothetical protein SORBI_3001G537900 [Sorghum bicolor]) HSP 1 Score: 87.8113 bits (216), Expect = 1.538e-18 Identity = 64/185 (34.59%), Postives = 88/185 (47.57%), Query Frame = 0 Query: 8 SLYDILGVSPAASPSTIKRAYQSAARATHPDKAAAHSKGGCRARPGHVSSPRFTFLEIQAAWDVLRARESRAAYDAAWGRKRDEEVEGFIAEEVRVAEMEEEGGEEDGKERWLLYPCRCGDAFRVP----KEEGRFLVGGTGSRETEEGGTEKVKMDRSGGGGGGQDGGAAVVVTCDGCSLRIRV 188 +LY++ VS A+ I+ AY+SAA THPDKA + SS + F +Q AW++LR SRA YD R + +E IA E++V +M E + + LLYPCRCGD F + E G F V G G E + A+VV+ C CSL+IR+ Sbjct: 12 TLYEVFSVSEDATYDEIRAAYRSAALNTHPDKAQTTLESSVP------SSEQQEFCSVQKAWEILRHPASRADYDKQLQSSR-QNIE-IIASEIKVGDMIIESTADTVE---LLYPCRCGDYFFITSCQLSEMGIF-VSGDGEVELQ----------------ASDSASASVVLGCGSCSLKIRL 168
BLAST of EWM30015.1 vs. NCBI_GenBank
Match: gi|1002298168|ref|XP_015612504.1| (PREDICTED: DPH4 homolog isoform X1 [Oryza sativa Japonica Group]) HSP 1 Score: 88.1965 bits (217), Expect = 2.367e-18 Identity = 62/181 (34.25%), Postives = 88/181 (48.62%), Query Frame = 0 Query: 8 SLYDILGVSPAASPSTIKRAYQSAARATHPDKAAAHSKGGCRARPGHVSSPRFTFLEIQAAWDVLRARESRAAYDAAWGRKRDEEVEGFIAEEVRVAEMEEEGGEEDGKERWLLYPCRCGDAFRVPKEEGRFLVGGTGSRETEEGGTEKVKMDRSGGGGGGQDGGAAVVVTCDGCSLRIRV 188 +LY++L V A+ I+ AY+SA THPDKA P SS R FL +Q AW++LR +SRA YD R + +E +A E+ + +M E + + LLYPCRCGD F + E +G G E+G E D ++VV+ C CSL+ R+ Sbjct: 42 TLYEVLSVRKDATYDEIRAAYKSAVLNTHPDKAQM------ALNPLVSSSERNEFLSVQKAWEILRYPKSRAEYDKQLQSSR-QNLE-IVATEIEIDDMIVESTADSVE---LLYPCRCGDYFSITSRE----LGQIGISVREDGEMELHTSD---------SVPSSVVLGCGSCSLKARL 198 The following BLAST results are available for this feature:
BLAST of EWM30015.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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