EWM24084.1, cds6589 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24084.1 vs. NCBI_GenBank
Match: gi|585105384|gb|EWM24084.1| (peroxin pex14 [Nannochloropsis gaditana]) HSP 1 Score: 350.517 bits (898), Expect = 4.445e-122 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
Query: 1 MDSDSMPATSAAKPSGTTPLREDFITNGVSFLRHPNVQQAPLSQRITFLEKKGLTQEEITEAFTRAKNGLESSLPFHSSSTPANNTSTTPPTHFSPPPPTPYAATEPLPSPPEPVGMWNQGFGYTVPGAVVAGLAIGAGITHLYRPSRRPFKPKLKLSPPWLKPQSGTGRISIPF 175
MDSDSMPATSAAKPSGTTPLREDFITNGVSFLRHPNVQQAPLSQRITFLEKKGLTQEEITEAFTRAKNGLESSLPFHSSSTPANNTSTTPPTHFSPPPPTPYAATEPLPSPPEPVGMWNQGFGYTVPGAVVAGLAIGAGITHLYRPSRRPFKPKLKLSPPWLKPQSGTGRISIPF
Sbjct: 1 MDSDSMPATSAAKPSGTTPLREDFITNGVSFLRHPNVQQAPLSQRITFLEKKGLTQEEITEAFTRAKNGLESSLPFHSSSTPANNTSTTPPTHFSPPPPTPYAATEPLPSPPEPVGMWNQGFGYTVPGAVVAGLAIGAGITHLYRPSRRPFKPKLKLSPPWLKPQSGTGRISIPF 175
BLAST of EWM24084.1 vs. NCBI_GenBank
Match: gi|553194928|ref|XP_005856055.1| (peroxin-14, partial [Nannochloropsis gaditana CCMP526] >gi|422293001|gb|EKU20302.1| peroxin-14, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 301.212 bits (770), Expect = 5.024e-101 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
Query: 1 MDSDSMPATSAAKPSGTTPLREDFITNGVSFLRHPNVQQAPLSQRITFLEKKGLTQEEITEAFTRAKNGLESSLPFHSSSTPANNTSTTPPTHFSPPPPTPYAATEPLPSPPEPVGMWNQGFGYTVPGAVVAGLAIGAGITHLYR 145
MDSDSMPATSAAKPSGTTPLREDFITNGVSFLRHPNVQQAPLSQRITFLEKKGLTQEEITEAFTRAKNGLESSLPFHSSSTPANNTSTTPPTHFSPPPPTPYAATEPLPSPPEPVGMWNQGFGYTVPGAVVAGLAIGAGITHLYR
Sbjct: 1 MDSDSMPATSAAKPSGTTPLREDFITNGVSFLRHPNVQQAPLSQRITFLEKKGLTQEEITEAFTRAKNGLESSLPFHSSSTPANNTSTTPPTHFSPPPPTPYAATEPLPSPPEPVGMWNQGFGYTVPGAVVAGLAIGAGITHLYR 145
BLAST of EWM24084.1 vs. NCBI_GenBank
Match: gi|1178059234|gb|ORE13875.1| (hypothetical protein BCV71DRAFT_59897 [Rhizopus microsporus]) HSP 1 Score: 74.3294 bits (181), Expect = 9.814e-14 Identity = 53/137 (38.69%), Postives = 69/137 (50.36%), Query Frame = 0
Query: 15 SGTTPLREDFITNGVSFLRHPNVQQAPLSQRITFLEKKGLTQEEITEAFTRAKNGLESSLPFHSSSTPANNTSTT--------------PPTHFSPPPPTPYAATEPLPSPPEPVGMWNQGFGYTVPGAVVAGLAIG 137
+ T LRED + VSFL PNVQ A +++I FL+KKGLTQ EI EAF RA + SL S++T ANN +T P + P PPTP E + + +GM FG T AV+ L +
Sbjct: 17 TSTITLREDMLKPAVSFLTSPNVQSADKAKKIAFLQKKGLTQAEIDEAFKRAGDNNTHSL---STTTSANNNATNTIASRPMVPPRTQAPQIIYQPLPPTPSMPAEKVFALAVVLGM--SAFGLT--AAVIGILKVS 146
BLAST of EWM24084.1 vs. NCBI_GenBank
Match: gi|729700178|emb|CEJ02789.1| (hypothetical protein RMCBS344292_16784 [Rhizopus microsporus]) HSP 1 Score: 75.0998 bits (183), Expect = 4.612e-13 Identity = 53/134 (39.55%), Postives = 68/134 (50.75%), Query Frame = 0
Query: 15 SGTTPLREDFITNGVSFLRHPNVQQAPLSQRITFLEKKGLTQEEITEAFTRAKNGLESSLPFHSSSTPANNTSTT--------------PPTHFSPPPPTPYAATEPLPSPPEPVGMWNQGFGYTVPGAVVAGL 134
+ T LRED + VSFL PNVQ A +++I FL+KKGLTQ EI EAF RA + SL S++T ANN +T P + P PPTP E + + +GM FG T A V G+
Sbjct: 17 TSTITLREDMLKPAVSFLTSPNVQSADKAKKIAFLQKKGLTQAEIDEAFKRAGDNNTHSL---STTTSANNNATNTIASRPMVPPRTQAPQIIYQPLPPTPSMPAEKVFALAVVLGM--SAFGLT---AAVIGI 142
BLAST of EWM24084.1 vs. NCBI_GenBank
Match: gi|298714014|emb|CBJ27246.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 75.8702 bits (185), Expect = 6.499e-13 Identity = 52/129 (40.31%), Postives = 70/129 (54.26%), Query Frame = 0
Query: 20 LREDFITNGVSFLRHPNVQQAPLSQRITFLEKKGLTQEEITEAFTRAKNGLESSLPFHSSSTPANNTSTTPPTHFSPPPPTPYAATEPLPSPPEPVGMWNQGFGYTVPGAVVAGLAIGAGITHLYRPSR 148
+RED I NGV+FL HP + APLSQRI+FLE KGLT EEI+ A +RA+ G +S+ S++ N+ ++ S P A+ PL W Q VPG + G A+GA + Y SR
Sbjct: 1 MREDQIVNGVNFLVHPKAKTAPLSQRISFLENKGLTAEEISAALSRAEGGEDSN---GSATAGGNSGLSSTSASSSGSSAFPAEASIPL---------WRQ---VAVPGVLAMG-AVGA-LGTYYAASR 112
BLAST of EWM24084.1 vs. NCBI_GenBank
Match: gi|729701047|emb|CEJ02005.1| (hypothetical protein RMCBS344292_16024 [Rhizopus microsporus]) HSP 1 Score: 74.3294 bits (181), Expect = 7.368e-13 Identity = 53/134 (39.55%), Postives = 68/134 (50.75%), Query Frame = 0
Query: 15 SGTTPLREDFITNGVSFLRHPNVQQAPLSQRITFLEKKGLTQEEITEAFTRAKNGLESSLPFHSSSTPANNTSTT--------------PPTHFSPPPPTPYAATEPLPSPPEPVGMWNQGFGYTVPGAVVAGL 134
+ T LRED + VSFL PNVQ A +++I FL+KKGLTQ EI EAF RA + SL S++T ANN +T P + P PPTP E + + +GM FG T A V G+
Sbjct: 17 TSTITLREDMLKPAVSFLTSPNVQSADKAKKIAFLQKKGLTQAEIDEAFKRAGDNNTHSL---STTTSANNNATNTIASRPMVPPRTQAPQIIYQPLPPTPSMPAERVFALAVVLGM--SAFGLT---AAVIGI 142
BLAST of EWM24084.1 vs. NCBI_GenBank
Match: gi|727152472|emb|CEG64970.1| (hypothetical protein RMATCC62417_01857 [Rhizopus microsporus]) HSP 1 Score: 72.4034 bits (176), Expect = 3.900e-12 Identity = 52/134 (38.81%), Postives = 67/134 (50.00%), Query Frame = 0
Query: 15 SGTTPLREDFITNGVSFLRHPNVQQAPLSQRITFLEKKGLTQEEITEAFTRAKNGLESSLPFHSSSTPANNTSTT--------------PPTHFSPPPPTPYAATEPLPSPPEPVGMWNQGFGYTVPGAVVAGL 134
+ T LRED + VSFL PNVQ A +++I FL+KKGLTQ EI EAF RA + SL S++T ANN +T P + P PPTP E + + + M FG T A V G+
Sbjct: 17 TSTITLREDMLKPAVSFLTSPNVQSADKAKKIAFLQKKGLTQAEIDEAFKRAGDNNTHSL---STTTSANNNATNTIASRPMVPPRTQAPQIIYQPLPPTPSMPAEKVFALAVVLSM--SAFGLT---AAVIGI 142
BLAST of EWM24084.1 vs. NCBI_GenBank
Match: gi|1178047041|gb|ORE02763.1| (hypothetical protein BCV72DRAFT_184746, partial [Rhizopus microsporus var. microsporus]) HSP 1 Score: 66.2402 bits (160), Expect = 6.382e-11 Identity = 47/120 (39.17%), Postives = 59/120 (49.17%), Query Frame = 0
Query: 20 LREDFITNGVSFLRHPNVQQAPLSQRITFLEKKGLTQEEITEAFTRA-KNGLESSLPFHSSSTPANNT----------STTPPTHFSPPPPTPYAATEPLPSPPEPVGMWNQGFGYTVPG 128
LRED + VSFL PNVQ A +++I FL+KKGLTQ EI EAF RA N S S++ A NT + P + P PPTP E + + +GM G V G
Sbjct: 1 LREDMLKPAVSFLTSPNVQSADKAKKIAFLQKKGLTQAEIDEAFKRAGDNTTHSLSTTTSANNNATNTIASRPMVPPRTQAPQIIYQPLPPTPSMPAEKVFALAVVLGMSAFGLTAAVIG 120
BLAST of EWM24084.1 vs. NCBI_GenBank
Match: gi|928520072|ref|XP_014078833.1| (hypothetical protein COCC4DRAFT_168796 [Bipolaris maydis ATCC 48331] >gi|451996893|gb|EMD89359.1| hypothetical protein COCHEDRAFT_1141504 [Bipolaris maydis C5] >gi|477587844|gb|ENI04924.1| hypothetical protein COCC4DRAFT_168796 [Bipolaris maydis ATCC 48331]) HSP 1 Score: 69.707 bits (169), Expect = 6.661e-11 Identity = 38/85 (44.71%), Postives = 49/85 (57.65%), Query Frame = 0
Query: 20 LREDFITNGVSFLRHPNVQQAPLSQRITFLEKKGLTQEEITEAFTRAKNGLESSLPFHSSSTPANNTSTTPPTHFSPPPPTPYAA 104
+RED IT+ VSFL+ P+V APL +RI FL+ K LTQEEI + RA P +S A+N S + PPP PYA+
Sbjct: 2 VREDLITSAVSFLQDPSVASAPLEKRIAFLQSKNLTQEEIDVSLARAAEDGGQPPPPPQTSAVASNAS------YRPPPAAPYAS 80
BLAST of EWM24084.1 vs. NCBI_GenBank
Match: gi|727137901|emb|CEG79341.1| (hypothetical protein RMATCC62417_13824 [Rhizopus microsporus]) HSP 1 Score: 67.0106 bits (162), Expect = 1.842e-10 Identity = 51/131 (38.93%), Postives = 65/131 (49.62%), Query Frame = 0
Query: 15 SGTTPLREDFITNGVSFLRHPNVQQAPLSQRITFLEKKGLTQEEITEAFTRA-KNGLESSLPFHSSSTPANNT----------STTPPTHFSPPPPTPYAATEPLPSPPEPVGMWNQGFGYTVPGAVVAGL 134
+ T LRED + VSFL PNVQ A +++I FL+KKGLTQ EI EAF RA N S S++ A NT + P + P PPTP E + + +GM FG T A V G+
Sbjct: 17 TSTITLREDMLKPAVSFLTSPNVQSADKAKKIAFLQKKGLTQAEIDEAFKRAGDNTTHSLSTTTSANNNATNTIASRPMVPPRTQAPQIIYQPLPPTPSMPAEKVFALAVVLGM--SAFGLT---AAVIGI 142 The following BLAST results are available for this feature:
BLAST of EWM24084.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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