EWM24091.1, cds6582 (CDS) Nannochloropsis gaditana

Overview
NameEWM24091.1
Unique Namecds6582
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002469.1:36879..36892 -
Alignment locationCM002469.1:36676..36726 -
Alignment locationCM002469.1:36604..36631 -
Alignment locationCM002469.1:36186..36524 -

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Properties
Property NameValue
Protein idEWM24091.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101278g1.3649.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002469.1supercontigCM002469.1:36879..36892 -
CM002469.1supercontigCM002469.1:36676..36726 -
CM002469.1supercontigCM002469.1:36604..36631 -
CM002469.1supercontigCM002469.1:36186..36524 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24091.1 vs. NCBI_GenBank
Match: gi|585105404|gb|EWM24091.1| (hypothetical protein Naga_101278g1 [Nannochloropsis gaditana])

HSP 1 Score: 291.967 bits (746), Expect = 5.317e-100
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0 
Query:    1 MLPVQVVARCLSVWVIHSWVEWARSRLRTKTLPAAQKSNSEPSTIRCIATLRRSKVSCHSTEGSVALFSFDRHVAKGLAGKHSALATSSSRTKEKRARGIQYSSETRQVVGGDLAEVKGGRSHQSYNTILLYDLRTDAYLERG 143
            MLPVQVVARCLSVWVIHSWVEWARSRLRTKTLPAAQKSNSEPSTIRCIATLRRSKVSCHSTEGSVALFSFDRHVAKGLAGKHSALATSSSRTKEKRARGIQYSSETRQVVGGDLAEVKGGRSHQSYNTILLYDLRTDAYLERG
Sbjct:    1 MLPVQVVARCLSVWVIHSWVEWARSRLRTKTLPAAQKSNSEPSTIRCIATLRRSKVSCHSTEGSVALFSFDRHVAKGLAGKHSALATSSSRTKEKRARGIQYSSETRQVVGGDLAEVKGGRSHQSYNTILLYDLRTDAYLERG 143
The following BLAST results are available for this feature:
BLAST of EWM24091.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105404|gb|EWM24091.1|5.317e-100100.00hypothetical protein Naga_101278g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6598rna6598Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications