EWM24103.1, cds6569 (CDS) Nannochloropsis gaditana

Overview
NameEWM24103.1
Unique Namecds6569
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:858947..859086 +
Alignment locationCM002468.1:859327..859555 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24103.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100445g2.3235.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:858947..859086 +
CM002468.1supercontigCM002468.1:859327..859555 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM24103.1 vs. NCBI_GenBank
Match: gi|585105436|gb|EWM24103.1| (hypothetical protein Naga_100445g2 [Nannochloropsis gaditana])

HSP 1 Score: 252.677 bits (644), Expect = 4.043e-85
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 
Query:    1 MLTRPSSGRNSIPCPPSSRLTIDPVAPLTRTAAAVSLTLPVEQVRWKGEGWGTARRQGRNVEEPEYIFDVDGHDGVSSFHLPSLHLQIQPTNITNNGLMSAVGDRHEAASGVRGSQYPRAFM 122
            MLTRPSSGRNSIPCPPSSRLTIDPVAPLTRTAAAVSLTLPVEQVRWKGEGWGTARRQGRNVEEPEYIFDVDGHDGVSSFHLPSLHLQIQPTNITNNGLMSAVGDRHEAASGVRGSQYPRAFM
Sbjct:    1 MLTRPSSGRNSIPCPPSSRLTIDPVAPLTRTAAAVSLTLPVEQVRWKGEGWGTARRQGRNVEEPEYIFDVDGHDGVSSFHLPSLHLQIQPTNITNNGLMSAVGDRHEAASGVRGSQYPRAFM 122
The following BLAST results are available for this feature:
BLAST of EWM24103.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105436|gb|EWM24103.1|4.043e-85100.00hypothetical protein Naga_100445g2 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6585rna6585Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications