EWM24108.1, cds6566 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24108.1 vs. NCBI_GenBank
Match: gi|585105442|gb|EWM24108.1| (enzyme of the cupin superfamily [Nannochloropsis gaditana]) HSP 1 Score: 470.7 bits (1210), Expect = 5.789e-168 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0 Query: 1 MRTTSGLPLVFLLLSLVLAGFWAPAASFLLPALPSFVTNFDFKKRATLGGLSASTTRDSSNMSGIKVVSEPDEATLTEMGVRNWPKWGCEPSEFPWTYGEAETCHAVEWPACDRGRGRLGHLPCGHELRMESKQGHQQTLQIPLVTLPRSFRKAQLEVRQLSDYLCVEFLITDGGAKLCNDGMKEMSVYPDQYLQRKRNHHWKTRLSAPCIISLLYFRPSFPVLSM 226 MRTTSGLPLVFLLLSLVLAGFWAPAASFLLPALPSFVTNFDFKKRATLGGLSASTTRDSSNMSGIKVVSEPDEATLTEMGVRNWPKWGCEPSEFPWTYGEAETCHAVEWPACDRGRGRLGHLPCGHELRMESKQGHQQTLQIPLVTLPRSFRKAQLEVRQLSDYLCVEFLITDGGAKLCNDGMKEMSVYPDQYLQRKRNHHWKTRLSAPCIISLLYFRPSFPVLSM Sbjct: 1 MRTTSGLPLVFLLLSLVLAGFWAPAASFLLPALPSFVTNFDFKKRATLGGLSASTTRDSSNMSGIKVVSEPDEATLTEMGVRNWPKWGCEPSEFPWTYGEAETCHAVEWPACDRGRGRLGHLPCGHELRMESKQGHQQTLQIPLVTLPRSFRKAQLEVRQLSDYLCVEFLITDGGAKLCNDGMKEMSVYPDQYLQRKRNHHWKTRLSAPCIISLLYFRPSFPVLSM 226
BLAST of EWM24108.1 vs. NCBI_GenBank
Match: gi|553183770|ref|XP_005853963.1| (enzyme of the cupin superfamily [Nannochloropsis gaditana CCMP526] >gi|422295098|gb|EKU22397.1| enzyme of the cupin superfamily [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 215.698 bits (548), Expect = 2.245e-68 Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0 Query: 1 MRTTSGLPLVFLLLSLVLAGFWAPAASFLLPALPSFVTNFDFKKRATLGGLSASTTRDSSNMSGIKVVSEPDEATLTEMGVRNWPKWGCEPSEFPWTYGEAETCHAVE 108 MRTTSGLPLVFLLLSLVLAGFWAPAASFL+PALPSFVTNFDFKKRATLGGLSASTTRDSSNMSGIKVVSEPDEATLTEMGVRNWPKWGCEPSEFPWTYGEAETC+ +E Sbjct: 1 MRTTSGLPLVFLLLSLVLAGFWAPAASFLVPALPSFVTNFDFKKRATLGGLSASTTRDSSNMSGIKVVSEPDEATLTEMGVRNWPKWGCEPSEFPWTYGEAETCYILE 108
BLAST of EWM24108.1 vs. NCBI_GenBank
Match: gi|470107904|ref|XP_004290278.1| (PREDICTED: uncharacterized protein LOC101291295 [Fragaria vesca subsp. vesca]) HSP 1 Score: 75.8702 bits (185), Expect = 7.714e-14 Identity = 36/93 (38.71%), Postives = 56/93 (60.22%), Query Frame = 0 Query: 43 KKRATLGGLSASTTRDSSNMSGIKVVSEPDEATLTEMGVRNWPKWGCEPSEFPWTYGEAETCHAVEWPACDRGRGRLGHLPCGHELRMESKQG 135 ++R ++ + S++ ++ GIK+ P E+TLT++GVRNWPKW C PS+FPWTY E ETC+ +E G++ P G + +E G Sbjct: 32 RRRISVTIAAVSSSSMATEKLGIKIEKNPPESTLTQLGVRNWPKWSCPPSKFPWTYSEKETCYLLE--------GKVKVTPAGSKESVEIGPG 116
BLAST of EWM24108.1 vs. NCBI_GenBank
Match: gi|1191664060|gb|OTG16029.1| (putative rmlC-like jelly roll fold protein [Helianthus annuus]) HSP 1 Score: 75.8702 bits (185), Expect = 1.010e-13 Identity = 37/94 (39.36%), Postives = 55/94 (58.51%), Query Frame = 0 Query: 42 FKKRATLGGLSASTTRDSSNMSGIKVVSEPDEATLTEMGVRNWPKWGCEPSEFPWTYGEAETCHAVEWPACDRGRGRLGHLPCGHELRMESKQG 135 +K R G + AS+ ++ GI +V P E+ LTE+GVR+WPKWGC+PS+FPWTY ETC+ + +G++ P G + +E G Sbjct: 48 YKTRRYQGLIKASSETMTTEKLGITIVKNPPESKLTELGVRSWPKWGCDPSKFPWTYSAKETCYLL--------KGKVKVYPEGSDEGVEIGAG 133
BLAST of EWM24108.1 vs. NCBI_GenBank
Match: gi|719988380|ref|XP_010252315.1| (PREDICTED: uncharacterized protein LOC104593919 [Nelumbo nucifera]) HSP 1 Score: 75.485 bits (184), Expect = 1.256e-13 Identity = 40/116 (34.48%), Postives = 62/116 (53.45%), Query Frame = 0 Query: 37 VTNFDFKKRATLGGLSASTTRDSSNMSGIKVVSEPDEATLTEMGVRNWPKWGCEPSEFPWTYGEAETCHAVEWPACDRGRGRLGHLPCGHELRMESKQGHQQTLQIPLVTLPRSFR 152 ++ ++KK++ G L+ ++ GIK+ P EA LTE+GVR+WPKWGC PS+FPWTY ETC+ + +G++ P G+ +E G LV P+ + Sbjct: 32 LSGVNYKKQSRGGLLTIRAETMATEKMGIKIEKNPPEAKLTELGVRSWPKWGCPPSKFPWTYDAKETCYLL--------KGKVKVYPDGYNDFVEFGAGD-------LVEFPKGMK 132
BLAST of EWM24108.1 vs. NCBI_GenBank
Match: gi|566200345|ref|XP_006376102.1| (hypothetical protein POPTR_0013s09550g [Populus trichocarpa] >gi|118487088|gb|ABK95374.1| unknown [Populus trichocarpa] >gi|550325366|gb|ERP53899.1| hypothetical protein POPTR_0013s09550g [Populus trichocarpa]) HSP 1 Score: 75.0998 bits (183), Expect = 1.857e-13 Identity = 37/74 (50.00%), Postives = 45/74 (60.81%), Query Frame = 0 Query: 63 SGIKVVSEPDEATLTEMGVRNWPKWGCEPSEFPWTYGEAETCHAVEWPACDRGRGRLGHLPCGHELRMESKQGH 136 SGIKVV P E+ LTE+GVR WPKWGC PS+FPWTY ETC+ +E G++ P G E +E G Sbjct: 72 SGIKVVRNPPESKLTELGVRKWPKWGCPPSKFPWTYSAKETCYLLE--------GKVKVYPDGAEEPVEITAGD 137
BLAST of EWM24108.1 vs. NCBI_GenBank
Match: gi|727566123|ref|XP_010455428.1| (PREDICTED: uncharacterized protein LOC104737030 [Camelina sativa] >gi|727566125|ref|XP_010455429.1| PREDICTED: uncharacterized protein LOC104737030 [Camelina sativa]) HSP 1 Score: 74.3294 bits (181), Expect = 2.413e-13 Identity = 36/97 (37.11%), Postives = 56/97 (57.73%), Query Frame = 0 Query: 40 FDFKKRATLGGLSASTTRDSSNMSGIKVVSEPDEATLTEMGVRNWPKWGCEPSEFPWTYGEAETCHAVEWPACDRGRGRLGHLPCGHELRMESKQGH 136 +D ++ ++ G+ A + ++ GI + P E+ LT++GVRNWPKWGC PS+FPWTY ETC+ +E G++ P G E +E + G Sbjct: 27 YDSRRSPSMAGIRAESM--ATEKLGITIEKNPPESKLTQLGVRNWPKWGCPPSKFPWTYSSKETCYLLE--------GKVKVYPDGSEEGVEIEAGD 113
BLAST of EWM24108.1 vs. NCBI_GenBank
Match: gi|743932373|ref|XP_011010474.1| (PREDICTED: uncharacterized protein LOC105115323 [Populus euphratica]) HSP 1 Score: 74.7146 bits (182), Expect = 2.647e-13 Identity = 37/73 (50.68%), Postives = 45/73 (61.64%), Query Frame = 0 Query: 63 SGIKVVSEPDEATLTEMGVRNWPKWGCEPSEFPWTYGEAETCHAVEWPACDRGRGRLGHLPCGHELRMESKQG 135 SGIKVV P E+ LTE+GVR WPKWGC PS+FPWTY ETC+ +E G++ P G E +E G Sbjct: 72 SGIKVVRNPPESKLTELGVRKWPKWGCPPSKFPWTYSAKETCYLLE--------GKVKVYPDGAEEPVEITAG 136
BLAST of EWM24108.1 vs. NCBI_GenBank
Match: gi|747045604|ref|XP_011095014.1| (uncharacterized protein LOC105174565 [Sesamum indicum]) HSP 1 Score: 74.7146 bits (182), Expect = 2.919e-13 Identity = 32/58 (55.17%), Postives = 44/58 (75.86%), Query Frame = 0 Query: 51 LSASTTRDSSNMSGIKVVSEPDEATLTEMGVRNWPKWGCEPSEFPWTYGEAETCHAVE 108 + ASTT++ + GIK+V P E+ L+E+GVR+WPKWGC PS+FPWTY ETC+ +E Sbjct: 65 IMASTTKEIEKL-GIKIVKSPPESKLSELGVRSWPKWGCPPSKFPWTYSSKETCYLLE 121
BLAST of EWM24108.1 vs. NCBI_GenBank
Match: gi|848913479|ref|XP_012854815.1| (PREDICTED: uncharacterized protein LOC105974294 [Erythranthe guttata] >gi|604303210|gb|EYU22683.1| hypothetical protein MIMGU_mgv1a016043mg [Erythranthe guttata]) HSP 1 Score: 73.9442 bits (180), Expect = 3.571e-13 Identity = 39/87 (44.83%), Postives = 50/87 (57.47%), Query Frame = 0 Query: 25 AASFLLPALPSFVTN---FDFKKRATLGGLSASTTRDSSNMSGIKVVSEPDEATLTEMGVRNWPKWGCEPSEFPWTYGEAETCHAVE 108 SFL P VT F +R T + S+ S IK+V P E+TL+E+GVR+WPKWGC PS+FPWTY ETC+ +E Sbjct: 9 GTSFLYPNGFKTVTKQSAFSLSRRTTGSSFRLNC---STEKSSIKIVKNPPESTLSELGVRSWPKWGCPPSKFPWTYSSRETCYLLE 92 The following BLAST results are available for this feature:
BLAST of EWM24108.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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