EWM24114.1, cds6558 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24114.1 vs. NCBI_GenBank
Match: gi|553182036|ref|XP_005853668.1| (rubredoxin-type fe 4 protein [Nannochloropsis gaditana CCMP526] >gi|422295393|gb|EKU22692.1| rubredoxin-type fe 4 protein [Nannochloropsis gaditana CCMP526] >gi|585105451|gb|EWM24114.1| Rubredoxin domain protein [Nannochloropsis gaditana]) HSP 1 Score: 431.409 bits (1108), Expect = 6.249e-153 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0 Query: 1 MPSSTSRTILNVCLLLLVAFVSASAFFLPSSRVLSTGSNHALHKHVASRRPLPSYAASEEGVKDTELIGPTAPPAPAVVEKAEEDMTEEEKAMKAKMDKIKELKAKEVFQTQDTGDYECQVCGWQYKEEKGFGPYPAGTAFAALPADFKCPNCKAGKPAFKSMTKTIAGFSDNSKYGFGGNNLTSEQKGGLIFGGLFFFFVLFLSGYLLE 210 MPSSTSRTILNVCLLLLVAFVSASAFFLPSSRVLSTGSNHALHKHVASRRPLPSYAASEEGVKDTELIGPTAPPAPAVVEKAEEDMTEEEKAMKAKMDKIKELKAKEVFQTQDTGDYECQVCGWQYKEEKGFGPYPAGTAFAALPADFKCPNCKAGKPAFKSMTKTIAGFSDNSKYGFGGNNLTSEQKGGLIFGGLFFFFVLFLSGYLLE Sbjct: 1 MPSSTSRTILNVCLLLLVAFVSASAFFLPSSRVLSTGSNHALHKHVASRRPLPSYAASEEGVKDTELIGPTAPPAPAVVEKAEEDMTEEEKAMKAKMDKIKELKAKEVFQTQDTGDYECQVCGWQYKEEKGFGPYPAGTAFAALPADFKCPNCKAGKPAFKSMTKTIAGFSDNSKYGFGGNNLTSEQKGGLIFGGLFFFFVLFLSGYLLE 210
BLAST of EWM24114.1 vs. NCBI_GenBank
Match: gi|298709740|emb|CBJ31543.1| (Rubredoxin [Ectocarpus siliculosus]) HSP 1 Score: 139.043 bits (349), Expect = 1.945e-37 Identity = 76/135 (56.30%), Postives = 91/135 (67.41%), Query Frame = 0 Query: 77 AVVEKAEEDMTEEEKAMKAKMDKIKELKAKEVFQTQDTGDYECQVCGWQYK-EEKGFGPYPAGTAFAALPADFKCPNCKAGKPAFKSMTKTIAGFSDNSKYGFGGNNLTSEQKGGLIFGGLFFFFVLFLSGYLLE 210 AVVE E+ +TE E A KAKM++I+ L+AKE F T TGD+EC CG+ YK E G G P GT F LP+ + CP CKA K F + TKTIAGF DN+ YG G N +T QK LIFG LF FFVLFL+GY L+ Sbjct: 99 AVVE--EKPLTEAELAQKAKMEEIERLRAKEKFTTVKTGDHECLQCGFVYKPENAGQGALP-GTQFDDLPSTWICPVCKAPKDTFFAQTKTIAGFEDNANYGLGANQMTGSQKNLLIFGSLFAFFVLFLAGYALD 230
BLAST of EWM24114.1 vs. NCBI_GenBank
Match: gi|1189392324|gb|OSX79237.1| (hypothetical protein BU14_0082s0002 [Porphyra umbilicalis]) HSP 1 Score: 136.732 bits (343), Expect = 7.123e-37 Identity = 73/169 (43.20%), Postives = 95/169 (56.21%), Query Frame = 0 Query: 43 HKHVASRRPLPSYAASEEGVKDTELIGPTAPPAPAVVEKAEEDMTEEEKAMKAKMDKIKELKAKEVFQTQDTGDYECQVCGWQYKEEKG--FGPYPAGTAFAALPADFKCPNCKAGKPAFKSMTKTIAGFSDNSKYGFGGNNLTSEQKGGLIFGGLFFFFVLFLSGYLL 209 H+ A P+ S A + D + + V A ++ EEE K +I LKA E F D G++EC CG+ Y + KG +GT FA LP+DF CP+CK K AF+ +TK IAGF+DN YGFG N+LT QK LI+GGL FF+LFLSGYL+ Sbjct: 44 HRRAARHTPVASAAEPGDRTPDGDEV--------VVASAASGNVAEEEDTRSEKQKEIDRLKAAEKFIEVDEGNFECPTCGYVYVKSKGEFLSGVKSGTEFADLPSDFTCPSCKTPKSAFRPITKVIAGFADNQSYGFGTNSLTGGQKSALIYGGLAVFFLLFLSGYLI 204
BLAST of EWM24114.1 vs. NCBI_GenBank
Match: gi|219129650|ref|XP_002184996.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403491|gb|EEC43443.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 121.324 bits (303), Expect = 8.446e-32 Identity = 60/129 (46.51%), Postives = 84/129 (65.12%), Query Frame = 0 Query: 86 MTEEEKAMKAKMDKIKELKAKEVFQTQDTGDYECQVCGWQYKEEKGF-----GPYPAGTAFAALPADFKCPNCKAGKPAFKSMTKTIAGFSDNSKYGFGGNNLTSEQKGGLIFGGLFFFFVLFLSGYLL 209 M+ +E+A++AK + EL+A+EVF + TG ++C C W++ EKG G GT FA LP++++CP C+A K AF+ + + I GF N YGFG N+ TSEQK IFGGL FF+LFLSGY + Sbjct: 1 MSADERAIRAKQKRADELRAQEVFMKKSTGKHKCTNCDWEFDVEKGDSNMIGGMIKPGTPFAELPSNWRCPVCRASKDAFEEVVEEIPGFEVNQGYGFGTNSWTSEQKNLAIFGGLAAFFLLFLSGYAM 129
BLAST of EWM24114.1 vs. NCBI_GenBank
Match: gi|1072238007|gb|OEU22734.1| (rubredoxin, rubredoxin-type Fe4 protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 119.013 bits (297), Expect = 8.957e-31 Identity = 59/131 (45.04%), Postives = 81/131 (61.83%), Query Frame = 0 Query: 84 EDMTEEEKAMKAKMDKIKELKAKEVFQTQDTGDYECQVCGWQYKEEKGF-----GPYPAGTAFAALPADFKCPNCKAGKPAFKSMTKTIAGFSDNSKYGFGGNNLTSEQKGGLIFGGLFFFFVLFLSGYLL 209 E+M ++++AM K + EL+ +EVF TG ++C C W+Y E KG G AGT F A+P+D++CP C+A K AF + + I GF N YGFG N+ ++ QK IFGGL FFVLFLSGY + Sbjct: 2 EEMDDKQRAMLEKQARNDELREQEVFMKISTGKHQCSNCDWEYDEVKGDSMMIGGMIKAGTKFDAMPSDWRCPVCRASKDAFVEIAEEIPGFEVNQGYGFGANSWSAGQKNAAIFGGLAAFFVLFLSGYAM 132
BLAST of EWM24114.1 vs. NCBI_GenBank
Match: gi|397621011|gb|EJK66055.1| (hypothetical protein THAOC_13041 [Thalassiosira oceanica]) HSP 1 Score: 119.013 bits (297), Expect = 5.057e-30 Identity = 63/144 (43.75%), Postives = 89/144 (61.81%), Query Frame = 0 Query: 77 AVVEKAEEDMTEEE---KAMKAKMDKIK---ELKAKEVFQTQDTGDYECQVCGWQYKEEKGF-----GPYPAGTAFAALPADFKCPNCKAGKPAFKSMTKTIAGFSDNSKYGFGGNNLTSEQKGGLIFGGLFFFFVLFLSGYLL 209 AV E+A+ED + E +A + +++K K EL+A+EVF + TG Y C+ C W+Y EKG G GTAF P++++CP C+A K F+ + +TI GF N YGFG N++T+ +K LI+GGL FF LFL GY L Sbjct: 55 AVAEQAQEDEADAEPVDEATRLQLEKQKRADELRAQEVFMKRTTGVYVCKSCDWEYDPEKGDSFLIGGMIKPGTAFEDTPSNWRCPTCRASKDQFEEVVETIPGFEVNQGYGFGTNSMTTGEKNTLIWGGLAAFFALFLGGYAL 198
BLAST of EWM24114.1 vs. NCBI_GenBank
Match: gi|1004148981|gb|KXZ56953.1| (hypothetical protein GPECTOR_1g86 [Gonium pectorale]) HSP 1 Score: 116.701 bits (291), Expect = 1.480e-29 Identity = 65/148 (43.92%), Postives = 85/148 (57.43%), Query Frame = 0 Query: 70 PTAPPAPAV-----VEKAEEDMTEEEKAMKAKMDKIKELKAKEVFQTQDTGDYECQVCGWQYKEEKGFG--PYPAGTAFAALPADFKCPNCKAGKPAFKSMTKTIAGFSDNSKYGFGGNNLTSEQKGGLIFGGLFFFFVLFLSGYLLE 210 P A P P + V A E TE + K + ++L+A E F +GD C+ CG++YK EKG P P G F ALP D+ CP C A K F+S K +AGF++N +YG GGN++T QK LI+G L FF LFL+GY LE Sbjct: 21 PVAIPRPILARDTRVRSAPEAETEFLSETERKKAEAEKLRAAEKFMVLGSGDATCKGCGYEYKPEKGDPEFPVPPGVTFQALPEDYVCPICGAPKSQFESRMKVVAGFAENQRYGLGGNSMTEGQKSLLIYGSLAVFFALFLAGYALE 168
BLAST of EWM24114.1 vs. NCBI_GenBank
Match: gi|302845527|ref|XP_002954302.1| (hypothetical protein VOLCADRAFT_82726 [Volvox carteri f. nagariensis] >gi|300260507|gb|EFJ44726.1| hypothetical protein VOLCADRAFT_82726 [Volvox carteri f. nagariensis]) HSP 1 Score: 116.316 bits (290), Expect = 2.167e-29 Identity = 68/162 (41.98%), Postives = 93/162 (57.41%), Query Frame = 0 Query: 51 PLPSYAASEEGVKDTELIGPTAPPAPAVVEKAEEDMTEEEKAMKAKMDKIKELKAKEVFQTQDTGDYECQVCGWQYKEEKGFG--PYPAGTAFAALPADFKCPNCKAGKPAFKSMTKTIAGFSDNSKYGFGGNNLTSEQKGGLIFGGLFFFFVLFLSGYLLE 210 P P+ A+ V ++ ++P E E +TE E+ KA+ DK L+A E F +G C+ CG++YK EKG P P G F ALP D+ CP C A K F+S K +AGF++N +YG GGN++T QK LI+G L FFVLFL+GY L+ Sbjct: 16 PRPAVTATPRHVVSRDIRLRSSP------ETDTEFLTEAERK-KAEADK---LRAAEKFMVIGSGSATCKGCGYEYKPEKGDPEFPVPPGVTFQALPDDYVCPICGAPKLKFESRAKVVAGFAENQRYGLGGNSMTESQKSLLIYGALAVFFVLFLAGYALD 167
BLAST of EWM24114.1 vs. NCBI_GenBank
Match: gi|670368860|ref|XP_008665633.1| (uncharacterized protein LOC103644215 [Zea mays] >gi|1142641472|gb|ONM10535.1| Rubredoxin-like superfamily protein [Zea mays]) HSP 1 Score: 116.316 bits (290), Expect = 9.449e-29 Identity = 67/177 (37.85%), Postives = 96/177 (54.24%), Query Frame = 0 Query: 38 SNHALH-KHVASRRPL-PSYAASEEGVKDTELIGPTAPPAPAVVEKAEEDMTEEEKAMKAKMDKIKELKAKEVFQTQDTGDYECQVCGWQYKEEKGFGPYPA--GTAFAALPADFKCPNCKAGKPAFKSMTKTIAGFSDNSKYGFGGNNLTSEQKGGLIFGGLFFFFVLFLSGYLLE 210 S++ LH H+ RP+ S+ + V T+ P P PA E E+E K+ + +E F +TG +ECQ CG++Y + G YP G FA LP D++CP C A + F+S + IAGF+ N ++G GGN+LTS QKG LI+G L F+ F+SGY L+ Sbjct: 41 SSYCLHLHHILYLRPVASSHHLTRHSVDVTKDDKPLEPLPPAAAETESTQQQEDEDGGP----KLDPRRFEEKFAVLNTGVHECQSCGYRYDQAAGDPSYPVPPGLPFAQLPDDWRCPTCGAAQSFFESKSVEIAGFAQNQQFGLGGNSLTSGQKGLLIYGSLLIGFLFFISGYFLQ 213
BLAST of EWM24114.1 vs. NCBI_GenBank
Match: gi|922856819|gb|KOO25136.1| (rubredoxin-like protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 112.849 bits (281), Expect = 8.778e-28 Identity = 66/168 (39.29%), Postives = 86/168 (51.19%), Query Frame = 0 Query: 42 LHKHVASRRPLPSYAASEEGVKDTELIGPTAPPAPAVVEKAEEDMTEEEKAMKAKMDKIKELKAKEVFQTQDTGDYECQVCGWQYKEEKGFGPYPAGTAFAALPADFKCPNCKAGKPAFKSMTKTIAGFSDNSKYGFGGNNLTSEQKGGLIFGGLFFFFVLFLSGYLL 209 L +H + R +A EE V + + E ++TE EK +I L+A E F + TG+ +C CG++YK E+G P T F +P + CPNCK+ K F + T IAGF DN KYGFG N T QK IFGGL FF LF+SGY L Sbjct: 23 LARHGTALRRAAVHAKEEEVVFTFGDADDMSDSTATAIMGEERELTEREK-------EIARLRAAEKFIQKATGNAKCNTCGYKYKWEEGAPGIPKRTPFELVPDSWSCPNCKSPKAFFAAETIEIAGFEDNQKYGFGTNTWTESQKSTAIFGGLAAFFALFISGYAL 183 The following BLAST results are available for this feature:
BLAST of EWM24114.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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