EWM24117.1, cds6555 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24117.1 vs. NCBI_GenBank
Match: gi|585105454|gb|EWM24117.1| (peptide methionine sulfoxide reductase [Nannochloropsis gaditana]) HSP 1 Score: 550.436 bits (1417), Expect = 0.000e+0 Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0
Query: 1 MLRDCLEFRPGCFFPLLIVRGRNFMRHVSLSVFLVHYVIASISASWAGQIAEKAGEFLENSLQMGQGMATGKPFGESAAKVVSKVFSTESANVKASCSWGQEVATFAAGCFWSVELSFQRVPGVASTRVGYTGGSVPHPSYKEVCTGRTGHAEAVEIKFDPSIVTYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSPEQKSQAEAAIKQEQKRRSMPIVTQLVPATTFYEAETYHQQYLEKGGQCARKGDLTPIRCYG 263
MLRDCLEFRPGCFFPLLIVRGRNFMRHVSLSVFLVHYVIASISASWAGQIAEKAGEFLENSLQMGQGMATGKPFGESAAKVVSKVFSTESANVKASCSWGQEVATFAAGCFWSVELSFQRVPGVASTRVGYTGGSVPHPSYKEVCTGRTGHAEAVEIKFDPSIVTYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSPEQKSQAEAAIKQEQKRRSMPIVTQLVPATTFYEAETYHQQYLEKGGQCARKGDLTPIRCYG
Sbjct: 1 MLRDCLEFRPGCFFPLLIVRGRNFMRHVSLSVFLVHYVIASISASWAGQIAEKAGEFLENSLQMGQGMATGKPFGESAAKVVSKVFSTESANVKASCSWGQEVATFAAGCFWSVELSFQRVPGVASTRVGYTGGSVPHPSYKEVCTGRTGHAEAVEIKFDPSIVTYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSPEQKSQAEAAIKQEQKRRSMPIVTQLVPATTFYEAETYHQQYLEKGGQCARKGDLTPIRCYG 263
BLAST of EWM24117.1 vs. NCBI_GenBank
Match: gi|585105453|gb|EWM24116.1| (peptide methionine sulfoxide reductase [Nannochloropsis gaditana]) HSP 1 Score: 338.191 bits (866), Expect = 1.820e-115 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
Query: 1 MLRDCLEFRPGCFFPLLIVRGRNFMRHVSLSVFLVHYVIASISASWAGQIAEKAGEFLENSLQMGQGMATGKPFGESAAKVVSKVFSTESANVKASCSWGQEVATFAAGCFWSVELSFQRVPGVASTRVGYTGGSVPHPSYKEVCTGRTGHAEAVEIKFDPSI 163
MLRDCLEFRPGCFFPLLIVRGRNFMRHVSLSVFLVHYVIASISASWAGQIAEKAGEFLENSLQMGQGMATGKPFGESAAKVVSKVFSTESANVKASCSWGQEVATFAAGCFWSVELSFQRVPGVASTRVGYTGGSVPHPSYKEVCTGRTGHAEAVEIKFDPSI
Sbjct: 1 MLRDCLEFRPGCFFPLLIVRGRNFMRHVSLSVFLVHYVIASISASWAGQIAEKAGEFLENSLQMGQGMATGKPFGESAAKVVSKVFSTESANVKASCSWGQEVATFAAGCFWSVELSFQRVPGVASTRVGYTGGSVPHPSYKEVCTGRTGHAEAVEIKFDPSI 163
BLAST of EWM24117.1 vs. NCBI_GenBank
Match: gi|553182052|ref|XP_005853670.1| (peptide methionine sulfoxide reductase [Nannochloropsis gaditana CCMP526] >gi|422295395|gb|EKU22694.1| peptide methionine sulfoxide reductase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 293.123 bits (749), Expect = 2.909e-98 Identity = 150/200 (75.00%), Postives = 150/200 (75.00%), Query Frame = 0
Query: 64 MGQGMATGKPFGESAAKVVSKVFSTESANVKASCSWGQEVATFAAGCFWSVELSFQRVPGVASTRVGYTGGSVPHPSYKEVCTGRTGHAEAVEIKFDPSIVTYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSPEQKSQAEAAIKQEQKRRSMPIVTQLVPATTFYEAETYHQQYLEKGGQCARKGDLTPIRCYG 263
MGQGMATGKPFGESAAKVVSKVFSTESANVKASCSWGQEVATFAAGCFWS VTYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSPEQKSQAEAAIKQEQKRRSMPIVTQLVPATTFYEAETYHQQYLEKGGQCARKGDLTPIRCYG
Sbjct: 1 MGQGMATGKPFGESAAKVVSKVFSTESANVKASCSWGQEVATFAAGCFWS--------------------------------------------------VTYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSPEQKSQAEAAIKQEQKRRSMPIVTQLVPATTFYEAETYHQQYLEKGGQCARKGDLTPIRCYG 150
BLAST of EWM24117.1 vs. NCBI_GenBank
Match: gi|1134799706|gb|OMJ12277.1| (Peptide methionine sulfoxide reductase A2-1 [Smittium culicis] >gi|1134803730|gb|OMJ14380.1| Peptide methionine sulfoxide reductase A2-1 [Smittium culicis]) HSP 1 Score: 226.868 bits (577), Expect = 8.836e-72 Identity = 101/171 (59.06%), Postives = 133/171 (77.78%), Query Frame = 0
Query: 93 VKASCSWGQEVATFAAGCFWSVELSFQRVPGVASTRVGYTGGSVPHPSYKEVCTGRTGHAEAVEIKFDPSIVTYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSPEQKSQAEAAIKQEQKRRSMPIVTQLVPATTFYEAETYHQQYLEKGGQCARKGDLTPIRCYG 263
K++ + E A FAAGCFWSVEL FQR+ GV T+VGY+GGS+P+P+YK+VC+G TGHAE+V +++DP++++Y +LL W++HDPT ++RQG D GTQYRSAIFYHSPEQK A +++ EQ + IVTQ+V A+ FY AE YHQ+YLEKGGQCA KG+ IRCYG
Sbjct: 8 TKSASAPNSEFAEFAAGCFWSVELMFQRLHGVLQTQVGYSGGSIPNPTYKQVCSGSTGHAESVLLEYDPAVISYNQLLNAFWEKHDPTTENRQGGDIGTQYRSAIFYHSPEQKDAAIKSLEAEQVKYKSKIVTQIVQASQFYPAEEYHQKYLEKGGQCALKGNKDRIRCYG 178
BLAST of EWM24117.1 vs. NCBI_GenBank
Match: gi|1132414842|gb|OLY77919.1| (Peptide methionine sulfoxide reductase A1 [Smittium mucronatum] >gi|1132415523|gb|OLY78159.1| Peptide methionine sulfoxide reductase A1 [Smittium mucronatum]) HSP 1 Score: 226.098 bits (575), Expect = 1.575e-71 Identity = 105/171 (61.40%), Postives = 130/171 (76.02%), Query Frame = 0
Query: 93 VKASCSWGQEVATFAAGCFWSVELSFQRVPGVASTRVGYTGGSVPHPSYKEVCTGRTGHAEAVEIKFDPSIVTYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSPEQKSQAEAAIKQEQKRRSMPIVTQLVPATTFYEAETYHQQYLEKGGQCARKGDLTPIRCYG 263
VK + G + A FAAGCFWSVEL+FQRV GV +VGY+GGS P+Y +VC G TGHAE+V ++FDPS+V+Y +LL V W +HDPT ++QGND GTQYRS IFYHSPEQK QA ++++EQK+ + IVTQ+V A FY AE YHQ+YLEKGGQCA KG+ IRCYG
Sbjct: 8 VKTASVPGSQFAEFAAGCFWSVELAFQRVHGVLQAQVGYSGGSTVDPTYNQVCRGNTGHAESVLLEFDPSVVSYNQLLDVFWKKHDPTTPNKQGNDVGTQYRSVIFYHSPEQKEQAIKSMEKEQKKYNSKIVTQIVEAGPFYPAEEYHQKYLEKGGQCAMKGNNDHIRCYG 178
BLAST of EWM24117.1 vs. NCBI_GenBank
Match: gi|1134799146|gb|OMJ11986.1| (Peptide methionine sulfoxide reductase A2-1 [Smittium culicis] >gi|1134825965|gb|OMJ29202.1| Peptide methionine sulfoxide reductase A2-1 [Smittium culicis]) HSP 1 Score: 224.942 bits (572), Expect = 5.008e-71 Identity = 102/176 (57.95%), Postives = 136/176 (77.27%), Query Frame = 0
Query: 88 TESANVKASCSWGQEVATFAAGCFWSVELSFQRVPGVASTRVGYTGGSVPHPSYKEVCTGRTGHAEAVEIKFDPSIVTYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSPEQKSQAEAAIKQEQKRRSMPIVTQLVPATTFYEAETYHQQYLEKGGQCARKGDLTPIRCYG 263
T+S +V +S E A FAAGCFWSVEL FQR+ GV T+VGY+GGS+P+P+YK+VC+G TGHAE+V +++DP++++Y +LL W++HDPT ++RQG D GTQYRSAIFYH+PEQK A +++ EQ + IVTQ+V A+ FY AE YHQ+YLEKGGQC+ KG+ IRCYG
Sbjct: 8 TKSTSVPSS-----EFAEFAAGCFWSVELMFQRLHGVLQTQVGYSGGSIPNPTYKQVCSGSTGHAESVLLEYDPNVISYSQLLNAFWEKHDPTTENRQGGDIGTQYRSAIFYHTPEQKDAAIKSLETEQSKYQSKIVTQIVQASQFYPAEEYHQKYLEKGGQCSLKGNKDRIRCYG 178
BLAST of EWM24117.1 vs. NCBI_GenBank
Match: gi|1160575125|ref|XP_020426718.1| (peptide methionine sulfoxide reductase [Polysphondylium pallidum PN500] >gi|281200364|gb|EFA74584.1| peptide methionine sulfoxide reductase [Polysphondylium pallidum PN500]) HSP 1 Score: 224.172 bits (570), Expect = 7.793e-71 Identity = 104/162 (64.20%), Postives = 126/162 (77.78%), Query Frame = 0
Query: 102 EVATFAAGCFWSVELSFQRVPGVASTRVGYTGGSVPHPSYKEVCTGRTGHAEAVEIKFDPSIVTYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSPEQKSQAEAAIKQEQKRRSMPIVTQLVPATTFYEAETYHQQYLEKGGQCARKGDLTPIRCYG 263
E ATFAAGCFWSVEL FQR+ GV STRVGYT G +P+YKEVCTG TGHAEAVE++FDP+ V+Y +LL V W +HDPT +RQG D+GTQYRS I+YH+ Q ++AE + KQEQ + PIVT+++PA FY AE YHQQYL+KGGQC+ KG IRCYG
Sbjct: 4 EKATFAAGCFWSVELVFQRMVGVLSTRVGYTNGVKLNPTYKEVCTGTTGHAEAVELEFDPAQVSYGQLLDVFWKKHDPTTLNRQGGDQGTQYRSGIYYHNDRQHTEAEESKKQEQLKYKQPIVTEILPAGVFYPAEEYHQQYLQKGGQCSSKGCTDKIRCYG 165
BLAST of EWM24117.1 vs. NCBI_GenBank
Match: gi|330801043|ref|XP_003288540.1| (hypothetical protein DICPUDRAFT_47974 [Dictyostelium purpureum] >gi|325081390|gb|EGC34907.1| hypothetical protein DICPUDRAFT_47974 [Dictyostelium purpureum]) HSP 1 Score: 223.016 bits (567), Expect = 1.583e-70 Identity = 100/160 (62.50%), Postives = 126/160 (78.75%), Query Frame = 0
Query: 104 ATFAAGCFWSVELSFQRVPGVASTRVGYTGGSVPHPSYKEVCTGRTGHAEAVEIKFDPSIVTYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSPEQKSQAEAAIKQEQKRRSMPIVTQLVPATTFYEAETYHQQYLEKGGQCARKGDLTPIRCYG 263
ATFAAGCFWSVEL FQRV GV TRVGY G V +P+Y++VC+G+TGHAEAV+++FDP V+Y ELL + W +HDPT +RQGND G+QYRS I+YHS EQK +A + ++EQK+ +PIVT+++PA FY AE YHQ+YLEKGGQC+ KG IRCYG
Sbjct: 4 ATFAAGCFWSVELLFQRVKGVVKTRVGYCNGQVENPTYRDVCSGKTGHAEAVDLEFDPKEVSYKELLQLFWGKHDPTTLNRQGNDHGSQYRSGIYYHSEEQKKEATESKEEEQKKYKVPIVTEILPAGHFYPAEEYHQRYLEKGGQCSSKGCNDKIRCYG 163
BLAST of EWM24117.1 vs. NCBI_GenBank
Match: gi|299116043|emb|CBN74459.1| (Peptide methionine sulfoxide reductase [Ectocarpus siliculosus]) HSP 1 Score: 222.631 bits (566), Expect = 7.350e-70 Identity = 110/197 (55.84%), Postives = 130/197 (65.99%), Query Frame = 0
Query: 67 GMATGKPFGESAAKVVSKVFSTESANVKASCSWGQEVATFAAGCFWSVELSFQRVPGVASTRVGYTGGSVPHPSYKEVCTGRTGHAEAVEIKFDPSIVTYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSPEQKSQAEAAIKQEQKRRSMPIVTQLVPATTFYEAETYHQQYLEKGGQCARKGDLTPIRCYG 263
G A G AA +V+K S E FAAGCFWSVEL++QRVPGV T VGYT G P+Y+EVC+G TGH EA+ +KFDP +V Y ELLTVLWD+ DPT +RQGND GTQYRS I+Y S EQK A A+ EQ + PIVT++ AT FY AE YHQ+YLEKGGQC+ KGD + IRCYG
Sbjct: 2 GNAKSMSLGPEAAAIVTKAVSPMPTPAIV------ETGIFAAGCFWSVELAYQRVPGVLETEVGYTDGHKKDPTYQEVCSGSTGHTEALRVKFDPRVVKYNELLTVLWDKIDPTTLNRQGNDSGTQYRSGIYYTSAEQKEIALASKAAEQAKLDKPIVTEIKEATEFYRAEDYHQKYLEKGGQCSLKGDTSNIRCYG 192
BLAST of EWM24117.1 vs. NCBI_GenBank
Match: gi|813198767|ref|XP_012208966.1| (hypothetical protein SPRG_14431 [Saprolegnia parasitica CBS 223.65] >gi|641525888|gb|KDO20296.1| hypothetical protein SPRG_14431 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 221.09 bits (562), Expect = 2.519e-69 Identity = 104/163 (63.80%), Postives = 120/163 (73.62%), Query Frame = 0
Query: 101 QEVATFAAGCFWSVELSFQRVPGVASTRVGYTGGSVPHPSYKEVCTGRTGHAEAVEIKFDPSIVTYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSPEQKSQAEAAIKQEQKRRSMPIVTQLVPATTFYEAETYHQQYLEKGGQCARKGDLTPIRCYG 263
+ATFAAGCFWSVEL+FQR+PGV T VGYT G +P+Y EVCTG+TGHAEAV IKFDP++V+Y LL W HDPT ++Q ND GTQYRS I+YHS QKS A A+ Q R PIVT++V A TFY AE YHQ+YLEKGGQCARKG IRCYG
Sbjct: 29 DNIATFAAGCFWSVELNFQRIPGVLETHVGYTNGPKANPTYTEVCTGKTGHAEAVRIKFDPAVVSYDALLDKFWSIHDPTTLNQQKNDVGTQYRSGIYYHSDAQKSLALASKASAQPRFRRPIVTEVVAAETFYVAEDYHQRYLEKGGQCARKGSTDAIRCYG 191 The following BLAST results are available for this feature:
BLAST of EWM24117.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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