EWM24119.1, cds6554 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24119.1 vs. NCBI_GenBank
Match: gi|585105456|gb|EWM24119.1| (hypothetical protein Naga_100404g5 [Nannochloropsis gaditana]) HSP 1 Score: 501.516 bits (1290), Expect = 1.543e-179 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0 Query: 1 MGGAFSSFFQRPSMPPENVPPVSIVVVGASFAGLAAVRTLVQASDPTKRRPFRVTVVEPKGYFEYTPGILRALVAPEHADALCVPLKEILEKPWGTPPTVDATESTGQVTWVKGWLRKIETKSIQVTCYGKREDPPTDGHAVDGSSSRVDEKHPRQEKRTTYTVAVPYDHLLICTGSGYAAPIKAPASLLASVPPHPSPPRRAGKGWESEEHPETDRDTSKQVAEEGGGRRGEAGERTSPRARDVFPF 248 MGGAFSSFFQRPSMPPENVPPVSIVVVGASFAGLAAVRTLVQASDPTKRRPFRVTVVEPKGYFEYTPGILRALVAPEHADALCVPLKEILEKPWGTPPTVDATESTGQVTWVKGWLRKIETKSIQVTCYGKREDPPTDGHAVDGSSSRVDEKHPRQEKRTTYTVAVPYDHLLICTGSGYAAPIKAPASLLASVPPHPSPPRRAGKGWESEEHPETDRDTSKQVAEEGGGRRGEAGERTSPRARDVFPF Sbjct: 1 MGGAFSSFFQRPSMPPENVPPVSIVVVGASFAGLAAVRTLVQASDPTKRRPFRVTVVEPKGYFEYTPGILRALVAPEHADALCVPLKEILEKPWGTPPTVDATESTGQVTWVKGWLRKIETKSIQVTCYGKREDPPTDGHAVDGSSSRVDEKHPRQEKRTTYTVAVPYDHLLICTGSGYAAPIKAPASLLASVPPHPSPPRRAGKGWESEEHPETDRDTSKQVAEEGGGRRGEAGERTSPRARDVFPF 248
BLAST of EWM24119.1 vs. NCBI_GenBank
Match: gi|553182034|ref|XP_005853667.1| (hypothetical protein NGA_0482200 [Nannochloropsis gaditana CCMP526] >gi|422295392|gb|EKU22691.1| hypothetical protein NGA_0482200 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 340.117 bits (871), Expect = 1.095e-116 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0 Query: 1 MGGAFSSFFQRPSMPPENVPPVSIVVVGASFAGLAAVRTLVQASDPTKRRPFRVTVVEPKGYFEYTPGILRALVAPEHADALCVPLKEILEKPWGTPPTVDATESTGQVTWVKGWLRKIETKSIQVTCYGKREDPPTDGHAVDGSSSRVDEKHPRQEKRTTYTVAVP 167 MGGAFSSFFQRPSMPPENVPPVSIVVVGASFAGLAAVRTLVQASDPTKRRPFRVTVVEPKGYFEYTPGILRALVAPEHADALCVPLKEILEKPWGTPPTVDATESTGQVTWVKGWLRKIETKSIQVTCYGKREDPPTDGHAVDGSSSRVDEKHPRQEKRTTYTVAVP Sbjct: 1 MGGAFSSFFQRPSMPPENVPPVSIVVVGASFAGLAAVRTLVQASDPTKRRPFRVTVVEPKGYFEYTPGILRALVAPEHADALCVPLKEILEKPWGTPPTVDATESTGQVTWVKGWLRKIETKSIQVTCYGKREDPPTDGHAVDGSSSRVDEKHPRQEKRTTYTVAVP 167
BLAST of EWM24119.1 vs. NCBI_GenBank
Match: gi|1129192241|gb|OLP97102.1| (Pregnancy-associated glycoprotein [Symbiodinium microadriaticum]) HSP 1 Score: 65.0846 bits (157), Expect = 2.259e-8 Identity = 35/90 (38.89%), Postives = 50/90 (55.56%), Query Frame = 0 Query: 24 IVVVGASFAGLAAVRTLVQASDPTKRRPFRVTVVEPKGYFEYTPGILRALVAPEHADALCVPLKEILEK------PWGTPPTVDATESTG 107 ++V+G SF+GLAA R L F VT+++ K +FEYTPG+LRA V P+H DAL L+ ++E WG ++ E T Sbjct: 781 VLVIGGSFSGLAAGRDLANH--------FLVTIIDAKEFFEYTPGVLRAYVKPKHLDALTFTLQPVIETRMGCKFIWGEVKELNGDEKTA 862
BLAST of EWM24119.1 vs. NCBI_GenBank
Match: gi|294953625|ref|XP_002787857.1| (conserved hypothetical protein [Perkinsus marinus ATCC 50983] >gi|239902881|gb|EER19653.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]) HSP 1 Score: 62.3882 bits (150), Expect = 3.897e-8 Identity = 35/91 (38.46%), Postives = 46/91 (50.55%), Query Frame = 0 Query: 25 VVVGASFAGLAAVRTLVQASDPTKRRPFRVTVVEPKGYFEYTPGILRALVAPEHADALCVPLKEILEKP------WGTPPTVDATESTGQV 109 +V+G F+G+ A L R F VT+V+ K YFEYTPG+LRA V P H DAL + ILE+ WG +D + V Sbjct: 9 LVIGGGFSGMFAANEL--------RGRFDVTLVDAKEYFEYTPGVLRAYVKPAHYDALSFTYQSILERTMGIKFLWGEVTELDGEKQIAHV 91
BLAST of EWM24119.1 vs. NCBI_GenBank
Match: gi|1129200437|gb|OLQ03677.1| (hypothetical protein AK812_SmicGene13349 [Symbiodinium microadriaticum]) HSP 1 Score: 58.5362 bits (140), Expect = 1.169e-7 Identity = 34/75 (45.33%), Postives = 43/75 (57.33%), Query Frame = 0 Query: 16 PENVPPVSIVVVGASFAGLAAVRTLVQASDPTKRRPFRVTVVEPKGYFEYTPGILRALVAPEHADALCVPLKEIL 90 PE P ++V+G AG+ VR L Q D +T+VEPK Y+EYTPGILR L +H + L VPL E L Sbjct: 22 PEERP--RLLVIGCGPAGIQIVRNLWQEFD--------LTLVEPKDYYEYTPGILRGLCDEQHLETLQVPLSEAL 86
BLAST of EWM24119.1 vs. NCBI_GenBank
Match: gi|294937188|ref|XP_002782002.1| (conserved hypothetical protein [Perkinsus marinus ATCC 50983] >gi|239893215|gb|EER13797.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]) HSP 1 Score: 62.3882 bits (150), Expect = 1.353e-7 Identity = 35/91 (38.46%), Postives = 46/91 (50.55%), Query Frame = 0 Query: 25 VVVGASFAGLAAVRTLVQASDPTKRRPFRVTVVEPKGYFEYTPGILRALVAPEHADALCVPLKEILEKP------WGTPPTVDATESTGQV 109 +V+G F+G+ A L R F VT+V+ K YFEYTPG+LRA V P H DAL + ILE+ WG +D + V Sbjct: 9 LVIGGGFSGMFAANEL--------RGRFDVTLVDAKEYFEYTPGVLRAYVKPGHYDALSFTYQSILERTMGIKFLWGEVTQLDGEKQIAHV 91
BLAST of EWM24119.1 vs. NCBI_GenBank
Match: gi|294950751|ref|XP_002786755.1| (conserved hypothetical protein [Perkinsus marinus ATCC 50983] >gi|239901109|gb|EER18551.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]) HSP 1 Score: 61.6178 bits (148), Expect = 2.175e-7 Identity = 34/91 (37.36%), Postives = 46/91 (50.55%), Query Frame = 0 Query: 25 VVVGASFAGLAAVRTLVQASDPTKRRPFRVTVVEPKGYFEYTPGILRALVAPEHADALCVPLKEILEKP------WGTPPTVDATESTGQV 109 +V+G F+G+ A L R F VT+V+ K YFEYTPG+LRA V P H DAL + +LE+ WG +D + V Sbjct: 9 LVIGGGFSGMFAANEL--------RGRFDVTLVDAKEYFEYTPGVLRAYVKPAHYDALSFTYQSVLERTMGIKFLWGEVTELDGEKQIAHV 91
BLAST of EWM24119.1 vs. NCBI_GenBank
Match: gi|1129172404|gb|OLP82071.1| (Apoptosis-inducing factor-like A [Symbiodinium microadriaticum]) HSP 1 Score: 61.6178 bits (148), Expect = 2.601e-7 Identity = 51/185 (27.57%), Postives = 80/185 (43.24%), Query Frame = 0 Query: 16 PENVP-------PVS---IVVVGASFAGLAAVRTLVQASDPTKRRPFRVTVVEPKGYFEYTPGILRALVAPEHADALCVPLKEILEKPWGTPPTVDATESTGQVTWVKGWLRKIETKSIQVTCYGKREDPPTDGHAVDGSSSRVDEKHPRQEKRTTYTVAVPYDHLLICTGSGYAAPIKAPASLL 190 PE+VP PV+ +VV+G FAGLAAVR L RR F VT+V+ K +FE++PG++R P+ L + + + K +V W+ G +KI+ K + V + + +A+PYD+ +I G Y++ + ASLL Sbjct: 190 PESVPLALPSARPVAKKKVVVIGGGFAGLAAVRRL--------RRDFEVTLVDAKEFFEFSPGMIRPYTQPQLYGRLVLDYRSLCNKM--------------KVAWIWGAAKKIDEKEVVV-------------------------QLSNTSTKNAQLLALPYDYCIISAGCHYSSNLWY-ASLL 326
BLAST of EWM24119.1 vs. NCBI_GenBank
Match: gi|1129194617|gb|OLP99040.1| (hypothetical protein AK812_SmicGene18441 [Symbiodinium microadriaticum]) HSP 1 Score: 60.8474 bits (146), Expect = 4.616e-7 Identity = 33/92 (35.87%), Postives = 46/92 (50.00%), Query Frame = 0 Query: 24 IVVVGASFAGLAAVRTLVQASDPTKRRPFRVTVVEPKGYFEYTPGILRALVAPEHADALCVPLKEILEK------PWGTPPTVDATESTGQV 109 ++V+G+ F+G R L + VTVV+ K YFEYTPG+LRA V P H DAL L+ +LE+ WG +D + Sbjct: 6 VLVIGSQFSGTFCAREL--------KSQCSVTVVDAKEYFEYTPGVLRAFVNPSHYDALSFSLQPVLERRLGVKYIWGEVKELDGDRKVANI 89 The following BLAST results are available for this feature:
BLAST of EWM24119.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 9
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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