EWM24121.1, cds6552 (CDS) Nannochloropsis gaditana

Overview
NameEWM24121.1
Unique Namecds6552
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:815659..816033 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24121.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_102032g1.9382.mrna
GbkeyCDS
End range.
End range816033
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:815659..816033 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24121.1 vs. NCBI_GenBank
Match: gi|585105460|gb|EWM24121.1| (hypothetical protein Naga_102032g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 242.276 bits (617), Expect = 6.965e-81
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0 
Query:    1 SLPPSLPPSFPPSLSPSACRPLAGPHGSPRQVVHRVEQAAGGSRLSGFKLVLARYCSSPHFFPSPLPGPRWAEEGKTRPAGRGEAAAGRLVRRRAGEERSLNRTGNDVVGSRRRGGWGEHKTYG 124
            SLPPSLPPSFPPSLSPSACRPLAGPHGSPRQVVHRVEQAAGGSRLSGFKLVLARYCSSPHFFPSPLPGPRWAEEGKTRPAGRGEAAAGRLVRRRAGEERSLNRTGNDVVGSRRRGGWGEHKTYG
Sbjct:    1 SLPPSLPPSFPPSLSPSACRPLAGPHGSPRQVVHRVEQAAGGSRLSGFKLVLARYCSSPHFFPSPLPGPRWAEEGKTRPAGRGEAAAGRLVRRRAGEERSLNRTGNDVVGSRRRGGWGEHKTYG 124
The following BLAST results are available for this feature:
BLAST of EWM24121.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105460|gb|EWM24121.1|6.965e-81100.00hypothetical protein Naga_102032g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6568rna6568Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications