EWM24122.1, cds6551 (CDS) Nannochloropsis gaditana

Overview
NameEWM24122.1
Unique Namecds6551
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:814153..814185 +
Alignment locationCM002468.1:814376..814491 +
Alignment locationCM002468.1:814558..814627 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24122.1
Productfructose- -bisphosphatase 2
Orig transcript idgnl|cribi|Naga_102887g1.5598.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:814153..814185 +
CM002468.1supercontigCM002468.1:814376..814491 +
CM002468.1supercontigCM002468.1:814558..814627 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0042578phosphoric ester hydrolase activity
GO:0042132fructose 1,6-bisphosphate 1-phosphatase activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0042221response to chemical
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR000146FBPase_class-1/SBPase
Homology
[Close]
BLAST of EWM24122.1 vs. NCBI_GenBank
Match: gi|585105462|gb|EWM24122.1| (fructose- -bisphosphatase 2 [Nannochloropsis gaditana])

HSP 1 Score: 151.754 bits (382), Expect = 1.021e-46
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0 
Query:    1 MGFIMEQAGGRATTGSEAIHDLQPKSVHQRVPTFLGSPEDVDELVASLKKLQRFDGSCSGAWRCGNTLRVRA 72
            MGFIMEQAGGRATTGSEAIHDLQPKSVHQRVPTFLGSPEDVDELVASLKKLQRFDGSCSGAWRCGNTLRVRA
Sbjct:    1 MGFIMEQAGGRATTGSEAIHDLQPKSVHQRVPTFLGSPEDVDELVASLKKLQRFDGSCSGAWRCGNTLRVRA 72
[Close]
BLAST of EWM24122.1 vs. NCBI_GenBank
Match: gi|52430318|gb|AAU50520.1| (fructose 1,6-bisphosphatase, partial [Fundulus heteroclitus])

HSP 1 Score: 72.7886 bits (177), Expect = 1.322e-15
Identity = 31/50 (62.00%), Postives = 39/50 (78.00%), Query Frame = 0 
Query:    1 MGFIMEQAGGRATTGSEAIHDLQPKSVHQRVPTFLGSPEDVDELVASLKK 50
            M FIMEQ GG+ATTGS+ I D+QP ++HQRVP  LGSP+DV E ++  KK
Sbjct:    5 MAFIMEQTGGKATTGSQNILDIQPTNIHQRVPVVLGSPDDVQEYISIYKK 54
[Close]
BLAST of EWM24122.1 vs. NCBI_GenBank
Match: gi|679142254|gb|KFW70028.1| (Fructose-1,6-bisphosphatase isozyme 2 [Pygoscelis adeliae])

HSP 1 Score: 77.0258 bits (188), Expect = 4.648e-15
Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 0 
Query:    1 MGFIMEQAGGRATTGSEAIHDLQPKSVHQRVPTFLGSPEDVDELVASLKKLQR 53
            M FIMEQAGG ATTG+EA+ D++P+S+HQRVP  LGSP+DV E +A ++K Q+
Sbjct:  286 MAFIMEQAGGMATTGTEAVLDVKPESIHQRVPLILGSPDDVQEYLACVQKHQK 338
[Close]
BLAST of EWM24122.1 vs. NCBI_GenBank
Match: gi|432884731|ref|XP_004074562.1| (fructose-1,6-bisphosphatase 1-like [Oryzias latipes])

HSP 1 Score: 76.6406 bits (187), Expect = 5.694e-15
Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 0 
Query:    1 MGFIMEQAGGRATTGSEAIHDLQPKSVHQRVPTFLGSPEDVDELVASLKK 50
            M FIMEQAGG ATTGSE I D+QP S+HQRVP  +GSP+DV E +A  KK
Sbjct:  285 MAFIMEQAGGMATTGSENILDIQPTSIHQRVPVVMGSPDDVQEYIAIYKK 334
[Close]
BLAST of EWM24122.1 vs. NCBI_GenBank
Match: gi|690453941|ref|XP_009326406.1| (PREDICTED: fructose-1,6-bisphosphatase isozyme 2 [Pygoscelis adeliae])

HSP 1 Score: 77.0258 bits (188), Expect = 6.659e-15
Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 0 
Query:    1 MGFIMEQAGGRATTGSEAIHDLQPKSVHQRVPTFLGSPEDVDELVASLKKLQR 53
            M FIMEQAGG ATTG+EA+ D++P+S+HQRVP  LGSP+DV E +A ++K Q+
Sbjct:  332 MAFIMEQAGGMATTGTEAVLDVKPESIHQRVPLILGSPDDVQEYLACVQKHQK 384
[Close]
BLAST of EWM24122.1 vs. NCBI_GenBank
Match: gi|695150964|ref|XP_009503166.1| (PREDICTED: fructose-1,6-bisphosphatase isozyme 2 [Phalacrocorax carbo] >gi|679206168|gb|KFW91095.1| Fructose-1,6-bisphosphatase isozyme 2 [Phalacrocorax carbo])

HSP 1 Score: 76.6406 bits (187), Expect = 6.766e-15
Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 0 
Query:    1 MGFIMEQAGGRATTGSEAIHDLQPKSVHQRVPTFLGSPEDVDELVASLKKLQR 53
            M FI+EQAGG ATTG+EA+ D++P+S+HQRVP  LGSPEDV E +A ++K Q+
Sbjct:  286 MAFIIEQAGGMATTGTEAVLDVKPESIHQRVPLILGSPEDVQEYLACVQKHQK 338
[Close]
BLAST of EWM24122.1 vs. NCBI_GenBank
Match: gi|768358122|ref|XP_011576137.1| (PREDICTED: fructose-1,6-bisphosphatase isozyme 2 [Aquila chrysaetos canadensis])

HSP 1 Score: 76.2554 bits (186), Expect = 8.372e-15
Identity = 33/53 (62.26%), Postives = 44/53 (83.02%), Query Frame = 0 
Query:    1 MGFIMEQAGGRATTGSEAIHDLQPKSVHQRVPTFLGSPEDVDELVASLKKLQR 53
            M FI+EQAGG ATTG+EA+ D++P+S+HQRVP  LGSPEDV E +A ++K Q+
Sbjct:  286 MAFIIEQAGGVATTGTEAVLDVKPESIHQRVPLILGSPEDVQEYLACVQKHQK 338
[Close]
BLAST of EWM24122.1 vs. NCBI_GenBank
Match: gi|961952703|ref|XP_014868871.1| (PREDICTED: fructose-1,6-bisphosphatase 1-like [Poecilia mexicana])

HSP 1 Score: 76.2554 bits (186), Expect = 9.558e-15
Identity = 32/50 (64.00%), Postives = 41/50 (82.00%), Query Frame = 0 
Query:    1 MGFIMEQAGGRATTGSEAIHDLQPKSVHQRVPTFLGSPEDVDELVASLKK 50
            M FIMEQAGG+ATTGSE + D+QP ++HQRVP  LGSP+DV+E ++  KK
Sbjct:  285 MAFIMEQAGGKATTGSENVLDIQPTNIHQRVPVILGSPDDVEEYLSIYKK 334
[Close]
BLAST of EWM24122.1 vs. NCBI_GenBank
Match: gi|961943159|ref|XP_014914190.1| (PREDICTED: fructose-1,6-bisphosphatase 1-like [Poecilia latipinna])

HSP 1 Score: 75.8702 bits (185), Expect = 1.219e-14
Identity = 32/50 (64.00%), Postives = 41/50 (82.00%), Query Frame = 0 
Query:    1 MGFIMEQAGGRATTGSEAIHDLQPKSVHQRVPTFLGSPEDVDELVASLKK 50
            M FIMEQAGG+ATTGSE + D+QP ++HQRVP  LGSP+DV+E ++  KK
Sbjct:  285 MAFIMEQAGGKATTGSENVLDIQPTNIHQRVPVVLGSPDDVEEYLSIYKK 334
[Close]
BLAST of EWM24122.1 vs. NCBI_GenBank
Match: gi|617389105|ref|XP_007548901.1| (PREDICTED: fructose-1,6-bisphosphatase 1-like [Poecilia formosa])

HSP 1 Score: 75.8702 bits (185), Expect = 1.219e-14
Identity = 32/50 (64.00%), Postives = 41/50 (82.00%), Query Frame = 0 
Query:    1 MGFIMEQAGGRATTGSEAIHDLQPKSVHQRVPTFLGSPEDVDELVASLKK 50
            M FIMEQAGG+ATTGSE + D+QP ++HQRVP  LGSP+DV+E ++  KK
Sbjct:  285 MAFIMEQAGGKATTGSENVLDIQPTNIHQRVPVVLGSPDDVEEYLSIYKK 334
The following BLAST results are available for this feature:
BLAST of EWM24122.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105462|gb|EWM24122.1|1.021e-46100.00fructose- -bisphosphatase 2 [Nannochloropsis gadit... [more]
gi|52430318|gb|AAU50520.1|1.322e-1562.00fructose 1,6-bisphosphatase, partial [Fundulus het... [more]
gi|679142254|gb|KFW70028.1|4.648e-1562.26Fructose-1,6-bisphosphatase isozyme 2 [Pygoscelis ... [more]
gi|432884731|ref|XP_004074562.1|5.694e-1568.00fructose-1,6-bisphosphatase 1-like [Oryzias latipe... [more]
gi|690453941|ref|XP_009326406.1|6.659e-1562.26PREDICTED: fructose-1,6-bisphosphatase isozyme 2 [... [more]
gi|695150964|ref|XP_009503166.1|6.766e-1562.26PREDICTED: fructose-1,6-bisphosphatase isozyme 2 [... [more]
gi|768358122|ref|XP_011576137.1|8.372e-1562.26PREDICTED: fructose-1,6-bisphosphatase isozyme 2 [... [more]
gi|961952703|ref|XP_014868871.1|9.558e-1564.00PREDICTED: fructose-1,6-bisphosphatase 1-like [Poe... [more]
gi|961943159|ref|XP_014914190.1|1.219e-1464.00PREDICTED: fructose-1,6-bisphosphatase 1-like [Poe... [more]
gi|617389105|ref|XP_007548901.1|1.219e-1464.00PREDICTED: fructose-1,6-bisphosphatase 1-like [Poe... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6567rna6567Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications