EWM24126.1, cds6547 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM24126.1 vs. NCBI_GenBank
Match: gi|585105474|gb|EWM24126.1| (hypothetical protein Naga_101856g2, partial [Nannochloropsis gaditana]) HSP 1 Score: 216.853 bits (551), Expect = 3.004e-71 Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0 Query: 1 LDSSFFPPSVFLSSFPYFSLLLSSFLCLPRFSPSSFTPPSSPPYTYPPSLPPSIRWGEDGYIRLQRGVRQEGGQCGLLMAASYPLRLEGGREGGREGGREDGCTYILSVAGL 112 LDSSFFPPSVFLSSFPYFSLLLSSFLCLPRFSPSSFTPPSSPPYTYPPSLPPSIRWGEDGYIRLQRGVRQEGGQCGLLMAASYPLRLEGGREGGREGGREDGCTYILSVAGL Sbjct: 1 LDSSFFPPSVFLSSFPYFSLLLSSFLCLPRFSPSSFTPPSSPPYTYPPSLPPSIRWGEDGYIRLQRGVRQEGGQCGLLMAASYPLRLEGGREGGREGGREDGCTYILSVAGL 112
BLAST of EWM24126.1 vs. NCBI_GenBank
Match: gi|374530932|gb|AEP83812.2| (cysteine endopeptidase EP8 [Secale cereale x Triticum turgidum subsp. durum]) HSP 1 Score: 56.9954 bits (136), Expect = 3.667e-7 Identity = 25/46 (54.35%), Postives = 28/46 (60.87%), Query Frame = 0 Query: 56 WGEDGYIRLQRGVRQEGGQCGLLMAASYPLRLEGGREGGREGGRED 101 WGE GYIR+QRGV Q GQCG+ M ASYP + REG D Sbjct: 317 WGEKGYIRMQRGVSQAEGQCGIAMQASYPTKSAPRARAVREGSHTD 362
BLAST of EWM24126.1 vs. NCBI_GenBank
Match: gi|475614495|gb|EMT29100.1| (Vignain [Aegilops tauschii]) HSP 1 Score: 56.225 bits (134), Expect = 5.407e-7 Identity = 25/46 (54.35%), Postives = 28/46 (60.87%), Query Frame = 0 Query: 56 WGEDGYIRLQRGVRQEGGQCGLLMAASYPLRLEGGREGGREGGRED 101 WGE GYIR+QRGV Q GQCG+ M ASYP + REG D Sbjct: 306 WGEKGYIRMQRGVSQPEGQCGIAMQASYPTKSAPHARTVREGSHTD 351
BLAST of EWM24126.1 vs. NCBI_GenBank
Match: gi|1149822981|ref|XP_020169664.1| (vignain-like [Aegilops tauschii subsp. tauschii]) HSP 1 Score: 56.225 bits (134), Expect = 6.456e-7 Identity = 25/46 (54.35%), Postives = 28/46 (60.87%), Query Frame = 0 Query: 56 WGEDGYIRLQRGVRQEGGQCGLLMAASYPLRLEGGREGGREGGRED 101 WGE GYIR+QRGV Q GQCG+ M ASYP + REG D Sbjct: 317 WGEKGYIRMQRGVSQPEGQCGIAMQASYPTKSAPHARTVREGSHTD 362 The following BLAST results are available for this feature:
BLAST of EWM24126.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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