EWM24131.1, cds6541 (CDS) Nannochloropsis gaditana

Overview
NameEWM24131.1
Unique Namecds6541
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:792220..792384 -
Alignment locationCM002468.1:791188..791907 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24131.1
Productmethyltransferase type 11
Orig transcript idgnl|cribi|Naga_100810g2.8468.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:792220..792384 -
CM002468.1supercontigCM002468.1:791188..791907 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
Homology
BLAST of EWM24131.1 vs. NCBI_GenBank
Match: gi|585105485|gb|EWM24131.1| (methyltransferase type 11 [Nannochloropsis gaditana])

HSP 1 Score: 606.675 bits (1563), Expect = 0.000e+0
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0
Query:    1 MDSAAPPSSQADGGVPHGHNDVAQIQTKNNMGFDMGIPSYRADTWWSSYDPQHPELPLVDIGSGLGTNVLAALRHGARVIAVDMSDDHLAEIRAKATALDSNAPGVTAGETAEKRLETRWGRLPDQVPLSPRSVSGILCAQVLHFLNPDGVRASFQRFSECLAPGGVLVVLACGHYQKLCSLIPGKIAAIDAATLRDPAGSHGCVTREEMKPMTEAIRAVLPEELHPAVLKDTTEFQTFSPQHLETVAQAVGLEVEVAEFCDGRLSNYPVFLYEEKEEDRGREQVLLIARKPGP 294
            MDSAAPPSSQADGGVPHGHNDVAQIQTKNNMGFDMGIPSYRADTWWSSYDPQHPELPLVDIGSGLGTNVLAALRHGARVIAVDMSDDHLAEIRAKATALDSNAPGVTAGETAEKRLETRWGRLPDQVPLSPRSVSGILCAQVLHFLNPDGVRASFQRFSECLAPGGVLVVLACGHYQKLCSLIPGKIAAIDAATLRDPAGSHGCVTREEMKPMTEAIRAVLPEELHPAVLKDTTEFQTFSPQHLETVAQAVGLEVEVAEFCDGRLSNYPVFLYEEKEEDRGREQVLLIARKPGP
Sbjct:    1 MDSAAPPSSQADGGVPHGHNDVAQIQTKNNMGFDMGIPSYRADTWWSSYDPQHPELPLVDIGSGLGTNVLAALRHGARVIAVDMSDDHLAEIRAKATALDSNAPGVTAGETAEKRLETRWGRLPDQVPLSPRSVSGILCAQVLHFLNPDGVRASFQRFSECLAPGGVLVVLACGHYQKLCSLIPGKIAAIDAATLRDPAGSHGCVTREEMKPMTEAIRAVLPEELHPAVLKDTTEFQTFSPQHLETVAQAVGLEVEVAEFCDGRLSNYPVFLYEEKEEDRGREQVLLIARKPGP 294          
BLAST of EWM24131.1 vs. NCBI_GenBank
Match: gi|522072801|ref|WP_020584010.1| (SAM-dependent methyltransferase [Endozoicomonas elysicola] >gi|658301813|gb|KEI70206.1| hypothetical protein GV64_05115 [Endozoicomonas elysicola])

HSP 1 Score: 98.2117 bits (243), Expect = 1.125e-20
Identity = 80/270 (29.63%), Postives = 116/270 (42.96%), Query Frame = 0
Query:   31 MGFDMGIPSYRADTWWSSYDPQHPELPLVDIGSGLGTNVLAALRHGARVIAVDMSDDHLAEIRAKATALDSNAPGVTAGETAEKRLETRWGRLPDQVPLSPRSVSGILCAQVLHFLNPDGVRASFQRFSECLAPGGVLVVLACGHYQKLCSLIPGKIAAIDAATLRDPAGSHGCVT--REEMKPMTEAIRAVLPEELHPAVL--KDTT----EFQTFSPQHLETVAQAVGLEVEVAEFCDGRLSNYPVFLYEEKEEDRGREQVLLIARKP 292
            +GF    P    D W SS+     + PL+DIG G G N  AAL HGA+V+A DM+   L +           A   +A             +LPD +P    S  GILCA+V HFL  + V  S       L PGG L++  C      C +   K   I     +D   S   ++  R+ +  + +A       E+   VL   D      +F  F    L  + + VG  +EV E   G  S++PV+ + +      R+QV +IA+KP
Sbjct:   13 VGFTFNTPVIYQDYWLSSW---KGDKPLLDIGCGHGVNTHAALMHGAKVMATDMNKPDLTDWLNDLPVAQQEAVTCSAA------------KLPDNIPFEDNSFCGILCAEVFHFLGNEEVIPSINGLYRILEPGGTLLLTCCS-----CDVDVLKCTGISEQIRKDFKKSPSTISGQRDYLSLLAQAAEDFNCPEITDPVLAAHDINIPGRDFCFFISDQLGELMKNVGFIIEVCE--QGEASHFPVWSHGD------RDQVRIIAKKP 254          
BLAST of EWM24131.1 vs. NCBI_GenBank
Match: gi|1178785735|ref|WP_083232777.1| (hypothetical protein [Endozoicomonas atrinae])

HSP 1 Score: 92.0485 bits (227), Expect = 2.226e-18
Identity = 75/270 (27.78%), Postives = 118/270 (43.70%), Query Frame = 0
Query:   31 MGFDMGIPSYRADTWWSSYDPQHPELPLVDIGSGLGTNVLAALRHGARVIAVDMSDDHLAEIRAKATALDSNAPGVTAGETAEKRLETRWGRLPDQVPLSPRSVSGILCAQVLHFLNPDGVRASFQRFSECLAPGGVLVVLACGHYQKLCSLIPGKIAAIDAATLRDPAGSHGCVT--REEMKPMTEAIRAV-LPEELHPAVLKDTT-----EFQTFSPQHLETVAQAVGLEVEVAEFCDGRLSNYPVFLYEEKEEDRGREQVLLIARKP 292
            +GF    P+   D+W SS+  + P   L+D+G G G N  +AL  GA V+A DM    L+E      A            T +K +  R  +LP+ +P    +  GILCA+V HFL+ + V  S       L PGG L++  C      C +   K   +     +    S   VT  R+ +  + +A   +  PE   P +          +F  F+ + L  + +  G  +E  E   G   +YPV+ + +K      +QV +IA+KP
Sbjct:   14 VGFTFHNPAVYLDSWLSSWKGKKP---LLDLGCGHGVNTHSALLQGAEVVATDMDKPDLSEWLNDLPA------------TQQKAVTCRAAKLPENIPFEDNAFCGILCAEVFHFLSNEEVIPSINELYRILEPGGTLLLTCCS-----CDVDVLKSTGLSQDVRKAIKASPFTVTCQRDYLSLLAQAAEELNCPEVTAPVLAAHEINIPERDFCFFASEQLGVLIEKAGFIIETCE--QGDAPHYPVWSHGDK------DQVRIIAKKP 255          
BLAST of EWM24131.1 vs. NCBI_GenBank
Match: gi|1199001831|ref|WP_087110941.1| (hypothetical protein [Endozoicomonas sp. S-B4-1U] >gi|1182715420|emb|SMA48603.1| hypothetical protein EHSB41UT_02806 [Endozoicomonas sp. S-B4-1U])

HSP 1 Score: 82.4185 bits (202), Expect = 1.003e-14
Identity = 70/257 (27.24%), Postives = 115/257 (44.75%), Query Frame = 0
Query:   43 DTWWSSYDPQHPELPLVDIGSGLGTNVLAALRHGARVIAVDMSDDHLAEIRAKATALDSNAPGVTAGETAEKRLETRWGRLPDQVPLSPRSVSGILCAQVLHFLNPDGVRASFQRFSECLAPGGVLVVLACGHYQKLCSLIPGKIAAIDAATLRDPAGSHGCVTREEMKPMTEAIRAV-LP-EELHPAV-----LKDTTEFQTFSPQHLETVAQAVGLEVEVAEFCDGRLSNYPVFLYEEKEEDRG-REQVLLIARK 291
            D W +S+D + P   L+DIG G   N +AA + GA+V+A +MS   +A +  +                 E  L   + +LPD+VP    S+SG+LC++VLHFL  D V  +       L P G +VV  CG          G + A +    ++P   H     + +  M + +R+  LP +++   +     L   + F  F+   L    +  G +VE      G   +YP++       D G  +Q+ +IA+K
Sbjct:   31 DHWIASWDTKKP---LLDIGCGNCNNAIAAAQQGAKVLAGEMSHQTIASLEQE--------------HGHENNLSFHYVKLPDEVPFMEESISGVLCSEVLHFLTHDEVLGTLSEVHRILKPEGTMVV-CCGSEDAKALQKTGFVEAQEKKREKEPDHLHH--IDDILSLMEKGLRSYKLPADDIQEGIEFYRSLMPHSRFNLFNKHQLAETFEKNGFKVE--HLQSGPAPHYPMW-------DHGDHDQIRIIAKK 258          
BLAST of EWM24131.1 vs. NCBI_GenBank
Match: gi|1113240159|gb|OJV06090.1| (hypothetical protein BGO12_24080 [Verrucomicrobia bacterium 61-8])

HSP 1 Score: 77.7962 bits (190), Expect = 3.183e-13
Identity = 71/241 (29.46%), Postives = 103/241 (42.74%), Query Frame = 0
Query:   56 LPLVDIGSGLGTNVLAALRHGARVIAVDMSDDHLAEIRAKATALDSNAPGVTAGETAEKRLETRWGRLPDQVPLSPRSVSGILCAQVLHFLNPDGVRASFQRFSECLAPGGVLVVL----ACGHYQKLCSLIPGKIAAIDAATLRDPAGSHGCVTREEMKPMTEAIRAVLPEELHPAVLKDTTEFQTFSPQHLETVAQAVGLEVEVAE-FCDGRLSNYPVFLYEEKEEDRGREQVLLIARK 291
            LPL+DIG+  G   L AL++GA V+A+D+S   LA ++  A A +            ++RL     R P +V L   S+SG+L  QVLHFL+   + A+  +    LAPGG L  +    +  +Y+K            D   +R   G             T   R  LP+ +H            F    L    +A G E+E  E FC    +N+P     +K    GRE + L A K
Sbjct:   43 LPLLDIGAAYGNATLPALKNGATVVALDLSPTELAILQQSADAEE------------QRRLVVMPVRFPQEVNLLNSSLSGVLGGQVLHFLDGPTLEAALGKIHRWLAPGGRLYAITITPSLSYYRKFW----------DEYQVRKARGDRWPGVFNPKDVATPEWRDRLPDLIH-----------LFDTDILGRAVRAAGFEIETLEYFC---FTNFP-----DKHRTDGREFLTLTAVK 242          
BLAST of EWM24131.1 vs. NCBI_GenBank
Match: gi|1174899216|ref|WP_081573795.1| (hypothetical protein [Chromobacterium violaceum] >gi|1173977300|gb|OQS20247.1| hypothetical protein B0T41_21875 [Chromobacterium violaceum])

HSP 1 Score: 77.411 bits (189), Expect = 5.354e-13
Identity = 70/240 (29.17%), Postives = 104/240 (43.33%), Query Frame = 0
Query:   56 LPLVDIGSGLGTNVLAALRHGARVIAVDMSDDHLAEIRAKATALDSNAPGVTAGETAEKRLETRWGRLPDQVPLSPRSVSGILCAQVLHFLNPDGVRASFQRFSECLAPGGVLVVLACGHYQKLCSLIPGKIAAIDAATLRDPAGSH---GCVTREEMKPMTEAIRAVLPEELHPAVLKDTTEFQTFSPQHLETVAQAVGLEVEVAEFCDGRLSNYPVFLYEEKEEDRGREQVLLIARKP 292
             PL++IG+G G+N ++AL++G  VI  D+S +HL EI  +      N P         +R+    G  PD++ L+  S++ ILC +VLHF N  G+       S  L PGG +       Y  + +   G   +         A  H   G +    M   + A    +P+ LH   L D   F+     H        G  VE A + + R   +PV    E   D GR+ V +IA KP
Sbjct:   44 FPLLEIGAGFGSNSISALKNGHTVICNDLSKEHL-EIAGR------NVPA-----EMLQRITFLDGSFPDEIDLTENSIASILCCRVLHFFNGQGIDKMLNAMSRLLIPGGRI-------YATVETPFIGNWKSFRPEYEARLAAGHPYPGLIENHRMHD-SIAFSNKIPDVLH---LFDLDSFKKLFTDH--------GFMVEQAAYIN-RQGVFPV----ECLSDDGRDSVGVIAVKP 247          
BLAST of EWM24131.1 vs. NCBI_GenBank
Match: gi|551575554|ref|XP_005773499.1| (hypothetical protein EMIHUDRAFT_208210 [Emiliania huxleyi CCMP1516] >gi|485625111|gb|EOD21070.1| hypothetical protein EMIHUDRAFT_208210 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 77.0258 bits (188), Expect = 8.009e-13
Identity = 51/149 (34.23%), Postives = 65/149 (43.62%), Query Frame = 0
Query:   24 QIQTKNNMGFDMGIPSYRADTWWSSYDPQHPELPLVDIGSGLGTNVLAALRHGARVIAVDMSDDHLAEIRAKATALDSNAPGVTAGETAEKRLETRWGRLPDQVPLSPRSVSGILCAQVLHFLNPDGVRASFQRFSECLAPGGVLVVLA 172
            Q  T+N  G  M   S  A  W  +YD  HP   +VD+G   G  V  A      V+A+D  ++HL  +R     L S                 R+GRLPD + L   S S IL A+VLHFLN      +       L PGG+L V A
Sbjct:   10 QALTQNGCGMQMATASPLAGAWIDAYDGHHP---IVDVGCAYGLAVKEAAARSVPVLAIDCCEEHLEAVRHTCAGLPSFE-------------GARFGRLPDDLSLPAASASSILVAEVLHFLNGPQCDRALAALHATLVPGGLLFVTA 142          
BLAST of EWM24131.1 vs. NCBI_GenBank
Match: gi|1125751341|ref|WP_075079011.1| (class I SAM-dependent methyltransferase [Terrimicrobium sacchariphilum] >gi|1012438473|dbj|GAT33254.1| polyketide synthase PksJ [Terrimicrobium sacchariphilum])

HSP 1 Score: 76.2554 bits (186), Expect = 1.214e-12
Identity = 72/241 (29.88%), Postives = 106/241 (43.98%), Query Frame = 0
Query:   57 PLVDIGSGLGTNVLAALRHGARVIAVDMSDDHLAEIRAKATALDSNAPGVTAGETAEKRLETRWGRLPDQVPLSPRSVSGILCAQVLHFLNPDGVRASFQRFSECLAPGGVLVVL----ACGHYQKLCSLIPGKIAAIDAATLRDPAGSHGCVTREEMKPMTEAIRAVLPEELHPAVLKDTTEFQTFSPQHLETVAQAVGLEVEVAE-FCDGRLSNYPVFLYEEKEEDRGREQVLLIARKP 292
            PL+DIG+  G   L AL++GA V+AVD+S   LA ++             +AG   +KRL     R P+++ L   SV+G+L  QVLHFL+   +  +  R    L PGG L  +    +  +Y+K       + A  D    R P    G +  +E+   +   R  LP+ +H            F    L    +  G E+E  E FC     N+P     +K    GRE + L A KP
Sbjct:   44 PLLDIGAAYGNATLPALKNGATVVAVDLSPTELAILQQ------------SAGAEEQKRLVVMPARFPEELSLLDASVAGVLGGQVLHFLDGPRLEEALGRIYRWLIPGGQLFAITITPSLSYYRKYWDEFHARKARGD----RWP----GVLNPKEVA--SPEWRDRLPDMIH-----------LFDKDILGRAVREAGFEIESLEYFC---FENFP-----DKHRTDGREFLSLTAMKP 243          
BLAST of EWM24131.1 vs. NCBI_GenBank
Match: gi|1179498781|ref|WP_083338839.1| (hypothetical protein [Chromobacterium sp. 37-2])

HSP 1 Score: 75.8702 bits (185), Expect = 1.727e-12
Identity = 70/241 (29.05%), Postives = 104/241 (43.15%), Query Frame = 0
Query:   56 LPLVDIGSGLGTNVLAALRHGARVIAVDMSDDHLAEIRAKATALDSNAPGVTAGETAEKRLETRWGRLPDQVPLSPRSVSGILCAQVLHFLNPDGVRASFQRFSECLAPGGVLVVLACGHYQKLCSLIPGKIAAIDAATLRDPAGSH---GCVTREEMKPMTEAIRAVLPEELHPAVLKDTTEFQTFSPQHLETVAQAVGLEVEVAEFCDGRLSNYPVFLYEEKEEDRGREQVLLIARKPG 293
             PL++IG+G G+N ++AL++G  VI  D+S +HL EI ++      N P         +R+    G  PD++ L+  S+S ILC +VLHF N  G+       S  L P G +       Y  + +   G   +         A  H   G +    M   + A    +P+ LH   L D   F+     H        G  VE A + + R   +PV    E   D GR+ V +IA KP 
Sbjct:   44 FPLLEIGAGFGSNSISALKNGHTVICNDLSKEHL-EIASR------NVPA-----EMLQRITFLDGSFPDEIDLTENSISSILCCRVLHFFNGPGIDKMLNAMSRLLIPNGRI-------YATVETPFIGNWKSFRPEYEARLAAGHPYPGLIENHRMHD-SIAFSNQIPDVLH---LFDLDSFKKLFTDH--------GFMVEQAAYIN-RQGVFPV----ECLSDDGRDSVGVIAIKPA 248          
BLAST of EWM24131.1 vs. NCBI_GenBank
Match: gi|1180716698|ref|WP_084201834.1| (hypothetical protein [Chromobacterium piscinae])

HSP 1 Score: 75.485 bits (184), Expect = 2.137e-12
Identity = 69/239 (28.87%), Postives = 105/239 (43.93%), Query Frame = 0
Query:   56 LPLVDIGSGLGTNVLAALRHGARVIAVDMSDDHLAEIRAKATALDSNAPGVTAGETAEKRLETRWGRLPDQVPLSPRSVSGILCAQVLHFLNPDGVRASFQRFSECLAPGGVLVVLACGHYQKLCSLIPGKIAAIDAATLRDPAGSH---GCVTREEMKPMTEAIRAVLPEELHPAVLKDTTEFQTFSPQHLETVAQAVGLEVEVAEFCDGRLSNYPVFLYEEKEEDRGREQVLLIARK 291
             PL++IG+G G+N ++AL++G  VI  D+S +HL EI ++      N P         +R+    G+ PD++ L+  S+S ILC +VLHF N  GV       S+ L P G +       Y  + +   G   +         A  H   G +    M   + A    +P+ LH   L D   F+     H        G  +E A + + R   +PV    E   D GR+ V +IA K
Sbjct:   44 FPLLEIGAGFGSNSISALKNGHTVICNDLSKEHL-EIASR------NVPA-----EMLQRITFLDGKFPDEIDLTENSISSILCCRVLHFFNGQGVDKMLDAMSKLLIPNGRI-------YATVETPFIGNWKSFRPEYEARLAAGHPYPGLIENHRMHD-SIAFSNQIPDVLH---LFDLDSFKKLFTDH--------GFVIEQASYIN-RQGVFPV----ECLSDDGRDSVGVIAVK 246          
The following BLAST results are available for this feature:
BLAST of EWM24131.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105485|gb|EWM24131.1|0.000e+0100.00methyltransferase type 11 [Nannochloropsis gaditan... [more]
gi|522072801|ref|WP_020584010.1|1.125e-2029.63SAM-dependent methyltransferase [Endozoicomonas el... [more]
gi|1178785735|ref|WP_083232777.1|2.226e-1827.78hypothetical protein [Endozoicomonas atrinae][more]
gi|1199001831|ref|WP_087110941.1|1.003e-1427.24hypothetical protein [Endozoicomonas sp. S-B4-1U] ... [more]
gi|1113240159|gb|OJV06090.1|3.183e-1329.46hypothetical protein BGO12_24080 [Verrucomicrobia ... [more]
gi|1174899216|ref|WP_081573795.1|5.354e-1329.17hypothetical protein [Chromobacterium violaceum] >... [more]
gi|551575554|ref|XP_005773499.1|8.009e-1334.23hypothetical protein EMIHUDRAFT_208210 [Emiliania ... [more]
gi|1125751341|ref|WP_075079011.1|1.214e-1229.88class I SAM-dependent methyltransferase [Terrimicr... [more]
gi|1179498781|ref|WP_083338839.1|1.727e-1229.05hypothetical protein [Chromobacterium sp. 37-2][more]
gi|1180716698|ref|WP_084201834.1|2.137e-1228.87hypothetical protein [Chromobacterium piscinae][more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6557rna6557Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications