EWM24134.1, cds6540 (CDS) Nannochloropsis gaditana

Overview
NameEWM24134.1
Unique Namecds6540
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:787668..787691 +
Alignment locationCM002468.1:787787..788260 +

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Properties
Property NameValue
Protein idEWM24134.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101164g2.9046.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:787668..787691 +
CM002468.1supercontigCM002468.1:787787..788260 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24134.1 vs. NCBI_GenBank
Match: gi|585105490|gb|EWM24134.1| (hypothetical protein Naga_101164g2 [Nannochloropsis gaditana])

HSP 1 Score: 317.39 bits (812), Expect = 2.404e-109
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0 
Query:    1 MWRASLNAMRSLSACHILLQEVPSHTLDARTQTSMSSLPGSPKEGREEVANGTRLTSQKAECTGLVDASSRHAITPYVLCSTIMRVSVWSSFPPPFTSSCPPALTLHPPFIPSSPSSFPLSLPPCLPPSLPSPPSMPTSFPPCSFSPLPYLPPPFLPPDRPRPRD 165
            MWRASLNAMRSLSACHILLQEVPSHTLDARTQTSMSSLPGSPKEGREEVANGTRLTSQKAECTGLVDASSRHAITPYVLCSTIMRVSVWSSFPPPFTSSCPPALTLHPPFIPSSPSSFPLSLPPCLPPSLPSPPSMPTSFPPCSFSPLPYLPPPFLPPDRPRPRD
Sbjct:    1 MWRASLNAMRSLSACHILLQEVPSHTLDARTQTSMSSLPGSPKEGREEVANGTRLTSQKAECTGLVDASSRHAITPYVLCSTIMRVSVWSSFPPPFTSSCPPALTLHPPFIPSSPSSFPLSLPPCLPPSLPSPPSMPTSFPPCSFSPLPYLPPPFLPPDRPRPRD 165
The following BLAST results are available for this feature:
BLAST of EWM24134.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105490|gb|EWM24134.1|2.404e-109100.00hypothetical protein Naga_101164g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6556rna6556Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications