EWM24146.1, cds6525 (CDS) Nannochloropsis gaditana

Overview
NameEWM24146.1
Unique Namecds6525
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:753919..754383 +
Alignment locationCM002468.1:754523..755212 +

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Properties
Property NameValue
Protein idEWM24146.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100426g2.9608.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:753919..754383 +
CM002468.1supercontigCM002468.1:754523..755212 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM24146.1 vs. NCBI_GenBank
Match: gi|585105508|gb|EWM24146.1| (hypothetical protein Naga_100426g2 [Nannochloropsis gaditana])

HSP 1 Score: 771.155 bits (1990), Expect = 0.000e+0
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0 
Query:    1 MSFRWDSLRAHTGCLKLFDLNDLAVRASRLQLRHEQRQEQLQHAASDHPRAYHFKRVTPSMLTARRNAVQAATAAAAAPPGAPPPPVALRPSVVTESAMAAGYDTVSMEGSRRERAWFPGQGRTLVGENGLVVFVQEDAKVSVMRDRRQKEDLQQAFPTADLTLVDTVWAQARSNFAAACTIMTSLRNNGHHTRKEGEGKGGGEGGESGGLRTEDPRVWPSVEEVWGEGGKEGGAEKGWEHVHLSTRGEQWVLLGEGEGEEEEGGGEEGEEESMTYRSVLMSNLMEMEGGEEWPAAPPRRTFPSLSSLGTRKKVRRREEDVMGGEEGGFLEEYELQKAVGVRTRRSMGRKRLTETGKRRMAAKLQARRAPRAAGEEGEDGVEVW 384
            MSFRWDSLRAHTGCLKLFDLNDLAVRASRLQLRHEQRQEQLQHAASDHPRAYHFKRVTPSMLTARRNAVQAATAAAAAPPGAPPPPVALRPSVVTESAMAAGYDTVSMEGSRRERAWFPGQGRTLVGENGLVVFVQEDAKVSVMRDRRQKEDLQQAFPTADLTLVDTVWAQARSNFAAACTIMTSLRNNGHHTRKEGEGKGGGEGGESGGLRTEDPRVWPSVEEVWGEGGKEGGAEKGWEHVHLSTRGEQWVLLGEGEGEEEEGGGEEGEEESMTYRSVLMSNLMEMEGGEEWPAAPPRRTFPSLSSLGTRKKVRRREEDVMGGEEGGFLEEYELQKAVGVRTRRSMGRKRLTETGKRRMAAKLQARRAPRAAGEEGEDGVEVW
Sbjct:    1 MSFRWDSLRAHTGCLKLFDLNDLAVRASRLQLRHEQRQEQLQHAASDHPRAYHFKRVTPSMLTARRNAVQAATAAAAAPPGAPPPPVALRPSVVTESAMAAGYDTVSMEGSRRERAWFPGQGRTLVGENGLVVFVQEDAKVSVMRDRRQKEDLQQAFPTADLTLVDTVWAQARSNFAAACTIMTSLRNNGHHTRKEGEGKGGGEGGESGGLRTEDPRVWPSVEEVWGEGGKEGGAEKGWEHVHLSTRGEQWVLLGEGEGEEEEGGGEEGEEESMTYRSVLMSNLMEMEGGEEWPAAPPRRTFPSLSSLGTRKKVRRREEDVMGGEEGGFLEEYELQKAVGVRTRRSMGRKRLTETGKRRMAAKLQARRAPRAAGEEGEDGVEVW 384
[Close]
BLAST of EWM24146.1 vs. NCBI_GenBank
Match: gi|553183719|ref|XP_005853951.1| (hypothetical protein NGA_0436500, partial [Nannochloropsis gaditana CCMP526] >gi|422295112|gb|EKU22411.1| hypothetical protein NGA_0436500, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 461.84 bits (1187), Expect = 6.351e-162
Identity = 224/224 (100.00%), Postives = 224/224 (100.00%), Query Frame = 0 
Query:    1 MSFRWDSLRAHTGCLKLFDLNDLAVRASRLQLRHEQRQEQLQHAASDHPRAYHFKRVTPSMLTARRNAVQAATAAAAAPPGAPPPPVALRPSVVTESAMAAGYDTVSMEGSRRERAWFPGQGRTLVGENGLVVFVQEDAKVSVMRDRRQKEDLQQAFPTADLTLVDTVWAQARSNFAAACTIMTSLRNNGHHTRKEGEGKGGGEGGESGGLRTEDPRVWPSVEE 224
            MSFRWDSLRAHTGCLKLFDLNDLAVRASRLQLRHEQRQEQLQHAASDHPRAYHFKRVTPSMLTARRNAVQAATAAAAAPPGAPPPPVALRPSVVTESAMAAGYDTVSMEGSRRERAWFPGQGRTLVGENGLVVFVQEDAKVSVMRDRRQKEDLQQAFPTADLTLVDTVWAQARSNFAAACTIMTSLRNNGHHTRKEGEGKGGGEGGESGGLRTEDPRVWPSVEE
Sbjct:    1 MSFRWDSLRAHTGCLKLFDLNDLAVRASRLQLRHEQRQEQLQHAASDHPRAYHFKRVTPSMLTARRNAVQAATAAAAAPPGAPPPPVALRPSVVTESAMAAGYDTVSMEGSRRERAWFPGQGRTLVGENGLVVFVQEDAKVSVMRDRRQKEDLQQAFPTADLTLVDTVWAQARSNFAAACTIMTSLRNNGHHTRKEGEGKGGGEGGESGGLRTEDPRVWPSVEE 224
The following BLAST results are available for this feature:
BLAST of EWM24146.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585105508|gb|EWM24146.1|0.000e+0100.00hypothetical protein Naga_100426g2 [Nannochloropsi... [more]
gi|553183719|ref|XP_005853951.1|6.351e-162100.00hypothetical protein NGA_0436500, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6541rna6541Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications