EWM24149.1, cds6524 (CDS) Nannochloropsis gaditana

Overview
NameEWM24149.1
Unique Namecds6524
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:752310..752396 -
Alignment locationCM002468.1:752126..752215 -
Alignment locationCM002468.1:751852..751922 -
Alignment locationCM002468.1:751420..751572 -
Alignment locationCM002468.1:751119..751216 -
Alignment locationCM002468.1:750880..750956 -

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Properties
Property NameValue
Protein idEWM24149.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100426g1.9611.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:752310..752396 -
CM002468.1supercontigCM002468.1:752126..752215 -
CM002468.1supercontigCM002468.1:751852..751922 -
CM002468.1supercontigCM002468.1:751420..751572 -
CM002468.1supercontigCM002468.1:751119..751216 -
CM002468.1supercontigCM002468.1:750880..750956 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM24149.1 vs. NCBI_GenBank
Match: gi|585105511|gb|EWM24149.1| (hypothetical protein Naga_100426g1 [Nannochloropsis gaditana])

HSP 1 Score: 390.963 bits (1003), Expect = 1.137e-137
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0 
Query:    1 MGALLKWEQIFVPVISFLTIFLVHARYFKLWLTPTAWADPHARVDLQSVHNLRTLFVGIRTRWVLENHGRKNMVVQTLRDMIRTCMSSATAAMAFISIFIGLSKSNLLTLNLLGCRPEDGPECNSFDAHLRMIRFGLCIGNFVVIFFNMLLAARFALNTSFMINTKRGWEATLTNADSSRAGSSLLALRTG 191
            MGALLKWEQIFVPVISFLTIFLVHARYFKLWLTPTAWADPHARVDLQSVHNLRTLFVGIRTRWVLENHGRKNMVVQTLRDMIRTCMSSATAAMAFISIFIGLSKSNLLTLNLLGCRPEDGPECNSFDAHLRMIRFGLCIGNFVVIFFNMLLAARFALNTSFMINTKRGWEATLTNADSSRAGSSLLALRTG
Sbjct:    1 MGALLKWEQIFVPVISFLTIFLVHARYFKLWLTPTAWADPHARVDLQSVHNLRTLFVGIRTRWVLENHGRKNMVVQTLRDMIRTCMSSATAAMAFISIFIGLSKSNLLTLNLLGCRPEDGPECNSFDAHLRMIRFGLCIGNFVVIFFNMLLAARFALNTSFMINTKRGWEATLTNADSSRAGSSLLALRTG 191
The following BLAST results are available for this feature:
BLAST of EWM24149.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105511|gb|EWM24149.1|1.137e-137100.00hypothetical protein Naga_100426g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6540rna6540Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications