EWM24151.1, cds6522 (CDS) Nannochloropsis gaditana

Overview
NameEWM24151.1
Unique Namecds6522
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:748151..748557 -
Alignment locationCM002468.1:747857..747990 -

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Properties
Property NameValue
Start range747857
Start range.
Protein idEWM24151.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101795g1.4209.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:748151..748557 -
CM002468.1supercontigCM002468.1:747857..747990 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24151.1 vs. NCBI_GenBank
Match: gi|585105516|gb|EWM24151.1| (hypothetical protein Naga_101795g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 372.859 bits (956), Expect = 6.979e-131
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0 
Query:    1 MSQWNNPQSSQEEVTREERKRLAHGWDGGQAKEEREENKEERKEKGLDKEGTIEDRDQEQQFLVSVPWSHKTRCITLSVPDKKGGMAAVTAAEIVEAVLGMDNLMTEAPRIKSGTQGVDVAPMPTSAMLIECGGKCYRHHETLPLCFPSLSTSSSSSSSCSSFLMAPVLRLHSPSWGLMG 180
            MSQWNNPQSSQEEVTREERKRLAHGWDGGQAKEEREENKEERKEKGLDKEGTIEDRDQEQQFLVSVPWSHKTRCITLSVPDKKGGMAAVTAAEIVEAVLGMDNLMTEAPRIKSGTQGVDVAPMPTSAMLIECGGKCYRHHETLPLCFPSLSTSSSSSSSCSSFLMAPVLRLHSPSWGLMG
Sbjct:    1 MSQWNNPQSSQEEVTREERKRLAHGWDGGQAKEEREENKEERKEKGLDKEGTIEDRDQEQQFLVSVPWSHKTRCITLSVPDKKGGMAAVTAAEIVEAVLGMDNLMTEAPRIKSGTQGVDVAPMPTSAMLIECGGKCYRHHETLPLCFPSLSTSSSSSSSCSSFLMAPVLRLHSPSWGLMG 180
The following BLAST results are available for this feature:
BLAST of EWM24151.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105516|gb|EWM24151.1|6.979e-131100.00hypothetical protein Naga_101795g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6538rna6538Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications