EWM30021.1, cds652 (CDS) Nannochloropsis gaditana

Overview
NameEWM30021.1
Unique Namecds652
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:86657..87088 -
Alignment locationCM002456.1:86272..86397 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30021.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100391g1.3410.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:86657..87088 -
CM002456.1supercontigCM002456.1:86272..86397 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM30021.1 vs. NCBI_GenBank
Match: gi|585112644|gb|EWM30021.1| (hypothetical protein Naga_100391g1 [Nannochloropsis gaditana])

HSP 1 Score: 377.096 bits (967), Expect = 2.102e-132
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0 
Query:    1 MPSLPLPALSIKGAKAREYKAFDGGEHNSLPSTFSDPTASASTHANVGHGDPASTGGVGEAYPTACASAHRPSWGPQGARHSSFGIGNEGLDRSRRGDQEGRGCCRRMTSFQISYLVVMLASMFYFISDALGSRRVLLWLEGILVSTHPQTAGMTTALLLSLGSVMVALGFPTTFLALLGGHVYR 185
            MPSLPLPALSIKGAKAREYKAFDGGEHNSLPSTFSDPTASASTHANVGHGDPASTGGVGEAYPTACASAHRPSWGPQGARHSSFGIGNEGLDRSRRGDQEGRGCCRRMTSFQISYLVVMLASMFYFISDALGSRRVLLWLEGILVSTHPQTAGMTTALLLSLGSVMVALGFPTTFLALLGGHVYR
Sbjct:    1 MPSLPLPALSIKGAKAREYKAFDGGEHNSLPSTFSDPTASASTHANVGHGDPASTGGVGEAYPTACASAHRPSWGPQGARHSSFGIGNEGLDRSRRGDQEGRGCCRRMTSFQISYLVVMLASMFYFISDALGSRRVLLWLEGILVSTHPQTAGMTTALLLSLGSVMVALGFPTTFLALLGGHVYR 185
The following BLAST results are available for this feature:
BLAST of EWM30021.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112644|gb|EWM30021.1|2.102e-132100.00hypothetical protein Naga_100391g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna652rna652Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications