EWM24160.1, cds6515 (CDS) Nannochloropsis gaditana

Overview
NameEWM24160.1
Unique Namecds6515
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:730948..732327 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24160.1
Productqueuine trna-ribosyltransferase
Orig transcript idgnl|cribi|Naga_100741g2.7090.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:730948..732327 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0008033tRNA processing
GO:0008616queuosine biosynthetic process
GO:0006400tRNA modification
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005488binding
GO:0008479queuine tRNA-ribosyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR004803Queuine_tRNA-ribosylTrfase
IPR002616tRNA_ribo_trans-like
Homology
BLAST of EWM24160.1 vs. NCBI_GenBank
Match: gi|585105529|gb|EWM24160.1| (queuine trna-ribosyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 949.118 bits (2452), Expect = 0.000e+0
Identity = 459/459 (100.00%), Postives = 459/459 (100.00%), Query Frame = 0
Query:    1 MGDNDSTGAPSEPILPPLVPEGTSPSFTPASPALCFHIHARWRRARAATVHLPHGPLATPVFMPVGTKGTIKGIPTEQLLHEDLSPQIILGNTYHLALQPGTELLEEMGGLHEFMQWPRNLLTDSGGFQMVSLLALAEITEEGVRFQSPVDGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVTVDHARFVEATARSIRWLDRCRKAHSRPREQNLFGIIQGGLDTSPGGLRDECLTAMVARDCPGYAIGGLAGGESKEAFWKVVAQCTAALPEGKPRYLMGVGYPLDLVVCTALGVDMYDCVYPTRTARFGVALRDAGVLKLKNKACAGEEKQAIDPLCGCMVCRHYSQAALHRLLKSGALGCQLVTYHNLAYMLGLMRRMRSAIMQGGQAFPHFVVGFLTTHYAWKNREEGVECRRKGECGMVPEWVREALAVAGIDVPDQSQEGNGHDRGGKDPV 459
            MGDNDSTGAPSEPILPPLVPEGTSPSFTPASPALCFHIHARWRRARAATVHLPHGPLATPVFMPVGTKGTIKGIPTEQLLHEDLSPQIILGNTYHLALQPGTELLEEMGGLHEFMQWPRNLLTDSGGFQMVSLLALAEITEEGVRFQSPVDGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVTVDHARFVEATARSIRWLDRCRKAHSRPREQNLFGIIQGGLDTSPGGLRDECLTAMVARDCPGYAIGGLAGGESKEAFWKVVAQCTAALPEGKPRYLMGVGYPLDLVVCTALGVDMYDCVYPTRTARFGVALRDAGVLKLKNKACAGEEKQAIDPLCGCMVCRHYSQAALHRLLKSGALGCQLVTYHNLAYMLGLMRRMRSAIMQGGQAFPHFVVGFLTTHYAWKNREEGVECRRKGECGMVPEWVREALAVAGIDVPDQSQEGNGHDRGGKDPV
Sbjct:    1 MGDNDSTGAPSEPILPPLVPEGTSPSFTPASPALCFHIHARWRRARAATVHLPHGPLATPVFMPVGTKGTIKGIPTEQLLHEDLSPQIILGNTYHLALQPGTELLEEMGGLHEFMQWPRNLLTDSGGFQMVSLLALAEITEEGVRFQSPVDGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVTVDHARFVEATARSIRWLDRCRKAHSRPREQNLFGIIQGGLDTSPGGLRDECLTAMVARDCPGYAIGGLAGGESKEAFWKVVAQCTAALPEGKPRYLMGVGYPLDLVVCTALGVDMYDCVYPTRTARFGVALRDAGVLKLKNKACAGEEKQAIDPLCGCMVCRHYSQAALHRLLKSGALGCQLVTYHNLAYMLGLMRRMRSAIMQGGQAFPHFVVGFLTTHYAWKNREEGVECRRKGECGMVPEWVREALAVAGIDVPDQSQEGNGHDRGGKDPV 459          
BLAST of EWM24160.1 vs. NCBI_GenBank
Match: gi|1214687256|gb|OWZ03610.1| (Queuine tRNA-ribosyltransferase [Phytophthora megakarya])

HSP 1 Score: 502.671 bits (1293), Expect = 6.245e-174
Identity = 249/419 (59.43%), Postives = 305/419 (72.79%), Query Frame = 0
Query:   33 ALCFHIHARWRRARAATVHLPHGPLATPVFMPVGTKGTIKGIPTEQLLHEDLSPQIILGNTYHLALQPGTELLEEM-GGLHEFMQWPRNLLTDSGGFQMVSLLALAEITEEGVRFQSPVDGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVTVDHARFVEATARSIRWLDRCRKAHSRPREQNLFGIIQGGLDTSPGGLRDECLTAMVARDCPGYAIGGLAGGESKEAFWKVVAQCTAALPEGKPRYLMGVGYPLDLVVCTALGVDMYDCVYPTRTARFGVALRDAGVLKLKNKACAGEEKQAIDPLCGCMVCRHYSQAALHRLLK-----------SGALGCQLVTYHNLAYMLGLMRRMRSAIMQGGQAFPHFVVGFLTTHYAWKNREEGVECRRKGECGMVPEWVREALAVAGI 439
            AL F +  R+ RARAAT+ LPHG + TPVFMPVGT+G IKG+ T+Q+  E +  QI L NTYHLAL+PGTE+L ++ G LHEFMQWPRNLLTDSGGFQMVSL  L E++E GV+F+S VDG+ M+LTPE SIAHQNRIG+DI+M LDDVVSSV  D  RF EA  R++RWLDRC +AH+ P +QNLFGI+QGGLD S GGLRD+CL  ++ RD PGYAIGGLAGGESKEAFWKVVA+CTA LPE KPRYLMGVGYPLDLVVC+ALGVDM+DCVYPTRTARFG A+  +G+LKLK+  C  +E+  ID  C C VC+ Y++A L  LLK           +G++G  L+TYHN+ YML LMRR+R +I+     F  FV  F+   +  ++                P+W  +AL  A I
Sbjct:    6 ALSFDVLGRYHRARAATLTLPHGEVRTPVFMPVGTQGAIKGLTTQQMQDEPVDCQIFLANTYHLALRPGTEVLAQLPGKLHEFMQWPRNLLTDSGGFQMVSLSRLCEVSEHGVQFESFVDGSTMILTPEASIAHQNRIGADIIMALDDVVSSVADDDERFKEACGRTVRWLDRCMQAHAHPDKQNLFGIVQGGLDVSEGGLRDQCLDELIKRDLPGYAIGGLAGGESKEAFWKVVAKCTAQLPENKPRYLMGVGYPLDLVVCSALGVDMFDCVYPTRTARFGTAIVPSGLLKLKSAKCEHDER-PIDDTCECFVCKKYTRAYLRVLLKKEETFGDQEETTGSIGAHLITYHNVTYMLNLMRRLRQSIIDN--KFQEFVQNFMLQQFPERD---------------YPQWAVDALTEAKI 406          
BLAST of EWM24160.1 vs. NCBI_GenBank
Match: gi|1079207936|ref|XP_018506678.1| (PREDICTED: queuine tRNA-ribosyltransferase-like [Pyrus x bretschneideri])

HSP 1 Score: 501.516 bits (1290), Expect = 1.621e-173
Identity = 257/409 (62.84%), Postives = 310/409 (75.79%), Query Frame = 0
Query:   33 ALCFHIHARWRRARAATVHLPHGPLATPVFMPVGTKGTIKGIPTEQLLHEDLSPQIILGNTYHLALQPGTELLEEMGGLHEFMQWPRNLLTDSGGFQMVSLLALAEITEEGVRFQSPVDGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVTVDHARFVEATARSIRWLDRCRKAHSRPREQNLFGIIQGGLDTSPGGLRDECLTAMVARDCPGYAIGGLAGGESKEAFWKVVAQCTAALPEGKPRYLMGVGYPLDLVVCTALGVDMYDCVYPTRTARFGVALRDAGVLKLKNKACAGEEKQAIDPLCGCMVCRHYSQAALHRLLKSGALGCQLVTYHNLAYMLGLMRRMRSAIMQGGQAFPHFVVGFLTTHYAWKNREEGVECRRKGECGMVPEWVREALAVAGIDV 441
            AL F +  R+ RARAA + LPH    TP+FMPVGT+GTIKG+ TEQL  ED+  QIILGNTYHLAL+P +ELL+E+GGLH+FM WPR LLTDSGGFQMVSLL LA+ITEEGV FQSPVDG +MLLTPE SI  QNRIG+DI+M LDDVV + T    R  EA  R+IRW+DRC +AH RP EQNLFGI+QGGLD     LRD C+  +V R+ PGYAIGGLAGGESK++FW+VVAQCTAALPE KPRY+MGVGYPLD+VVC+ALG DMYDCVYPTRTARFG AL   GVLKLK+KA A E+ + +DP C CMVC++Y++A +H L+   A+G QL++YHNL YM+ L R + S+I++G   FP FV  FL   +             KG+   VPEWV +A+ VAGID+
Sbjct:    2 ALRFEVLGRFNRARAARLTLPHFVCQTPLFMPVGTQGTIKGLTTEQL--EDIGAQIILGNTYHLALRPTSELLDELGGLHKFMNWPRALLTDSGGFQMVSLLHLADITEEGVTFQSPVDGKRMLLTPEESIQIQNRIGADIIMALDDVVKTTTTG-PRVEEAMYRTIRWIDRCIEAHKRPTEQNLFGIVQGGLDPV---LRDICVRGLVNRNLPGYAIGGLAGGESKDSFWRVVAQCTAALPEEKPRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALVPEGVLKLKHKAMA-EDTRPVDPTCDCMVCKNYTRAYIHCLVTKDAMGSQLLSYHNLYYMMKLSRNLHSSIIEG--RFPEFVCNFLQQMFP------------KGD---VPEWVCDAMEVAGIDI 386          
BLAST of EWM24160.1 vs. NCBI_GenBank
Match: gi|695450395|ref|XP_009535468.1| (hypothetical protein PHYSODRAFT_355889 [Phytophthora sojae] >gi|348669012|gb|EGZ08835.1| hypothetical protein PHYSODRAFT_355889 [Phytophthora sojae])

HSP 1 Score: 501.13 bits (1289), Expect = 3.176e-173
Identity = 249/423 (58.87%), Postives = 309/423 (73.05%), Query Frame = 0
Query:   33 ALCFHIHARWRRARAATVHLPHGPLATPVFMPVGTKGTIKGIPTEQLLHEDLSPQIILGNTYHLALQPGTELLEEM-GGLHEFMQWPRNLLTDSGGFQMVSLLALAEITEEGVRFQSPVDGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVTVDHARFVEATARSIRWLDRCRKAHSRPREQNLFGIIQGGLDTSPGGLRDECLTAMVARDCPGYAIGGLAGGESKEAFWKVVAQCTAALPEGKPRYLMGVGYPLDLVVCTALGVDMYDCVYPTRTARFGVALRDAGVLKLKNKACAGEEKQAIDPLCGCMVCRHYSQAALHRLLK-----------SGALGCQLVTYHNLAYMLGLMRRMRSAIMQGGQAFPHFVVGFLTTHYAWKNREEGVECRRKGECGMVPEWVREALAVAGIDVPD 443
            AL F +  R+ RARAAT+ LPHGP+ TPVFMPVGT+G IKG+ T Q+  + +  QI L NTYHLAL+PGT++L ++ G LHEFMQWPRNLLTDSGGFQMVSL  L E++E GV+F+S VDG+ M+LTPE SIAHQN IG+DI+M LDDVVSS+  D  RF EA  R++RWLDRC +AH+ P +QNLFGI+QGGLD S GGLRD+CL+ ++ RD PGYAIGGLAGGESKEAFWKVVA+CTA LPE KPRYLMGVGYPLDLVVC+ALGVDM+DCVYPTRTARFG A+  +G+LKLK+  C  +E+  ID  C C VC+ YS+A L  LLK           +G++G  L+TYHN+ YML LMRR+R +I+   + F  FV  F+   +   NR+              P+W  +AL  A I + +
Sbjct:    6 ALTFEVLGRYHRARAATLTLPHGPVRTPVFMPVGTQGAIKGLTTPQMQEKPVDCQIFLANTYHLALRPGTDVLAQLPGKLHEFMQWPRNLLTDSGGFQMVSLSRLCEVSEHGVQFESFVDGSTMILTPEASIAHQNNIGADIIMALDDVVSSLADDDERFKEACERTVRWLDRCIQAHANPDKQNLFGIVQGGLDVSEGGLRDQCLSELIKRDLPGYAIGGLAGGESKEAFWKVVAKCTAQLPENKPRYLMGVGYPLDLVVCSALGVDMFDCVYPTRTARFGTAIVPSGLLKLKSAKCEHDER-PIDDTCECFVCKKYSRAYLRVLLKKEETFGDPEETTGSIGAHLITYHNVTYMLNLMRRLRQSIID--EKFEEFVRNFMLQQFP--NRD-------------YPQWAVDALTEAKISLDE 410          
BLAST of EWM24160.1 vs. NCBI_GenBank
Match: gi|669152222|ref|XP_008611673.1| (queuine tRNA-ribosyltransferase [Saprolegnia diclina VS20] >gi|530736559|gb|EQC34801.1| queuine tRNA-ribosyltransferase [Saprolegnia diclina VS20])

HSP 1 Score: 500.745 bits (1288), Expect = 5.378e-173
Identity = 250/427 (58.55%), Postives = 306/427 (71.66%), Query Frame = 0
Query:   18 LVPEGTSPSFTPASPALCFHIHARWRRARAATVHLPHGPLATPVFMPVGTKGTIKGIPTEQLLHEDLSPQIILGNTYHLALQPGTELLEEMGGLHEFMQWPRNLLTDSGGFQMVSLLALAEITEEGVRFQSPVDGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVTVDHARFVEATARSIRWLDRCRKAHSRPREQNLFGIIQGGLDTSPGGLRDECLTAMVARDCPGYAIGGLAGGESKEAFWKVVAQCTAALPEGKPRYLMGVGYPLDLVVCTALGVDMYDCVYPTRTARFGVALRDAGVLKLKNKACAGEEKQAIDPLCGCMVCRHYSQAALHRLLKS-GALGCQLVTYHNLAYMLGLMRRMRSAIMQGGQAFPHFVVGFLTTHYAWKNREEGVECRRKGECGMVPEWVREALAVAGIDVPD 443
            +V +G    FT  SPAL   +   + RARA  +HLPHG + TPVFMPVGT+GTIKGI TEQ+    +  +I+L NTYHLAL+PGT+L+++MGGLH++M W RN+LTDSGGFQMVSLL LA+ITE GV FQSPVDGT+MLLTPEMSIAHQN IG+DI+M LDDV  S   D ARF+EAT R++RW+DRC  AH +P  QNLFGI+QGGLDTS GGLRD C+  M+ R+ PGYAIGGLAGGE K +FW VVA     LP  KPRYLMGVGYP+DLVVC+ALGVDM+DCVYPTRT RFG  +   G+L+LK    A  +   +D  C C VC  Y++A LH+++K+ G++G QLVTYHN+ YML LM  +R+AI+   + FP FV  F+    AW   E             VP WV EAL VAGI + D
Sbjct:    5 VVHDGGPVEFTKESPALKLDVLKTFNRARACNLHLPHGTVHTPVFMPVGTQGTIKGITTEQMAMPPIDCKILLANTYHLALRPGTDLIDDMGGLHQYMNWNRNILTDSGGFQMVSLLELAQITEVGVEFQSPVDGTKMLLTPEMSIAHQNNIGADIIMALDDVAPSTIEDDARFLEATDRTMRWIDRCIAAHKKPHCQNLFGIVQGGLDTSEGGLRDRCIQGMIERNLPGYAIGGLAGGEDKTSFWNVVAMSAERLPANKPRYLMGVGYPVDLVVCSALGVDMFDCVYPTRTGRFGTGITSKGLLRLKLAEFA-NDTAPLDADCACYVCTKYTRAYLHQVMKTEGSIGPQLVTYHNITYMLYLMSNVRAAILN--ETFPAFVRAFMK---AWFPTEP------------VPTWVVEALTVAGISLDD 413          
BLAST of EWM24160.1 vs. NCBI_GenBank
Match: gi|675170591|ref|XP_008894180.1| (queuine tRNA-ribosyltransferase [Phytophthora parasitica INRA-310] >gi|566018636|gb|ETI41547.1| queuine tRNA-ribosyltransferase [Phytophthora parasitica P1569] >gi|567955962|gb|ETK81591.1| queuine tRNA-ribosyltransferase [Phytophthora parasitica] >gi|567984634|gb|ETL34997.1| queuine tRNA-ribosyltransferase [Phytophthora parasitica] >gi|568105567|gb|ETN20203.1| queuine tRNA-ribosyltransferase [Phytophthora parasitica INRA-310] >gi|570322244|gb|ETO70192.1| queuine tRNA-ribosyltransferase [Phytophthora parasitica P1976] >gi|570946037|gb|ETP11294.1| queuine tRNA-ribosyltransferase [Phytophthora parasitica CJ01A1])

HSP 1 Score: 499.975 bits (1286), Expect = 7.699e-173
Identity = 247/421 (58.67%), Postives = 307/421 (72.92%), Query Frame = 0
Query:   33 ALCFHIHARWRRARAATVHLPHGPLATPVFMPVGTKGTIKGIPTEQLLHEDLSPQIILGNTYHLALQPGTELLEEM-GGLHEFMQWPRNLLTDSGGFQMVSLLALAEITEEGVRFQSPVDGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVTVDHARFVEATARSIRWLDRCRKAHSRPREQNLFGIIQGGLDTSPGGLRDECLTAMVARDCPGYAIGGLAGGESKEAFWKVVAQCTAALPEGKPRYLMGVGYPLDLVVCTALGVDMYDCVYPTRTARFGVALRDAGVLKLKNKACAGEEKQAIDPLCGCMVCRHYSQAALHRLLK-----------SGALGCQLVTYHNLAYMLGLMRRMRSAIMQGGQAFPHFVVGFLTTHYAWKNREEGVECRRKGECGMVPEWVREALAVAGIDV 441
            AL F +  R+ RARAAT+ LPHG + TPVFMPVGT+G IKG+ T Q+  + +  QI L NTYHLAL+PGTE+L ++ G LHEFMQWPRNLLTDSGGFQMVSL  L E++E GV+F+S VDG+ M+LTPE SIAHQNRIG+DI+M LDDVVSS+  D  RF EA  R++RWLDRC +AH+ P +QNLFGI+QGGLD S GGLRD+CL+ ++ RD PGYAIGGLAGGESKEAFWKVVA+CTA LPE KPRYLMGVGYPLDLVVC+ALGVDM+DCVYPTRTARFG A+  +G+LKLK+  C  +++  ID  C C VC+ Y++A L  LLK           +G++G  L+TYHN+ YML LMRR+R +I+   + F  FV  F+   +  +N                P+W  +AL  A I +
Sbjct:    6 ALSFEVLGRYHRARAATLTLPHGEVRTPVFMPVGTQGAIKGLTTPQMQEKPVDCQIFLANTYHLALRPGTEVLAQLPGKLHEFMQWPRNLLTDSGGFQMVSLSRLCEVSEHGVQFESFVDGSTMILTPEASIAHQNRIGADIIMALDDVVSSLADDDERFKEACGRTVRWLDRCIQAHAHPDKQNLFGIVQGGLDVSEGGLRDQCLSELIQRDLPGYAIGGLAGGESKEAFWKVVAKCTAQLPENKPRYLMGVGYPLDLVVCSALGVDMFDCVYPTRTARFGTAIVPSGLLKLKSAKCEHDDR-PIDDTCECFVCKKYTRAYLRVLLKKEETFGDAEETTGSIGAHLITYHNVTYMLNLMRRLRQSIID--EKFEQFVQNFMLQQFPDRN---------------YPQWAVDALTEAKISL 408          
BLAST of EWM24160.1 vs. NCBI_GenBank
Match: gi|970664917|gb|KUG01710.1| (Queuine tRNA-ribosyltransferase [Phytophthora nicotianae])

HSP 1 Score: 499.59 bits (1285), Expect = 1.173e-172
Identity = 247/421 (58.67%), Postives = 307/421 (72.92%), Query Frame = 0
Query:   33 ALCFHIHARWRRARAATVHLPHGPLATPVFMPVGTKGTIKGIPTEQLLHEDLSPQIILGNTYHLALQPGTELLEEM-GGLHEFMQWPRNLLTDSGGFQMVSLLALAEITEEGVRFQSPVDGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVTVDHARFVEATARSIRWLDRCRKAHSRPREQNLFGIIQGGLDTSPGGLRDECLTAMVARDCPGYAIGGLAGGESKEAFWKVVAQCTAALPEGKPRYLMGVGYPLDLVVCTALGVDMYDCVYPTRTARFGVALRDAGVLKLKNKACAGEEKQAIDPLCGCMVCRHYSQAALHRLLK-----------SGALGCQLVTYHNLAYMLGLMRRMRSAIMQGGQAFPHFVVGFLTTHYAWKNREEGVECRRKGECGMVPEWVREALAVAGIDV 441
            AL F +  R+ RARAAT+ LPHG + TPVFMPVGT+G IKG+ T Q+  + +  QI L NTYHLAL+PGTE+L ++ G LHEFMQWPRNLLTDSGGFQMVSL  L E++E GV+F+S VDG+ M+LTPE SIAHQNRIG+DI+M LDDVVSS+  D  RF EA  R++RWLDRC +AH+ P +QNLFGI+QGGLD S GGLRD+CL+ ++ RD PGYAIGGLAGGESKEAFWKVVA+CTA LPE KPRYLMGVGYPLDLVVC+ALGVDM+DCVYPTRTARFG A+  +G+LKLK+  C  +++  ID  C C VC+ Y++A L  LLK           +G++G  L+TYHN+ YML LMRR+R +I+   + F  FV  F+   +  +N                P+W  +AL  A I +
Sbjct:    4 ALFFEVLGRYHRARAATLTLPHGEVRTPVFMPVGTQGAIKGLTTPQMQEKPVDCQIFLANTYHLALRPGTEVLAQLPGKLHEFMQWPRNLLTDSGGFQMVSLSRLCEVSEHGVQFESFVDGSTMILTPEASIAHQNRIGADIIMALDDVVSSLADDDERFKEACGRTVRWLDRCIQAHAHPDKQNLFGIVQGGLDVSEGGLRDQCLSELIQRDLPGYAIGGLAGGESKEAFWKVVAKCTAQLPENKPRYLMGVGYPLDLVVCSALGVDMFDCVYPTRTARFGTAIVPSGLLKLKSAKCEHDDR-PIDDTCECFVCKKYTRAYLRVLLKKEETFGDAEETTGSIGAHLITYHNVTYMLNLMRRLRQSIID--EKFEQFVQNFMLQQFPDRN---------------YPQWAVDALTEAKISL 406          
BLAST of EWM24160.1 vs. NCBI_GenBank
Match: gi|568014061|gb|ETL88238.1| (queuine tRNA-ribosyltransferase [Phytophthora parasitica])

HSP 1 Score: 499.59 bits (1285), Expect = 1.344e-172
Identity = 247/421 (58.67%), Postives = 307/421 (72.92%), Query Frame = 0
Query:   33 ALCFHIHARWRRARAATVHLPHGPLATPVFMPVGTKGTIKGIPTEQLLHEDLSPQIILGNTYHLALQPGTELLEEM-GGLHEFMQWPRNLLTDSGGFQMVSLLALAEITEEGVRFQSPVDGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVTVDHARFVEATARSIRWLDRCRKAHSRPREQNLFGIIQGGLDTSPGGLRDECLTAMVARDCPGYAIGGLAGGESKEAFWKVVAQCTAALPEGKPRYLMGVGYPLDLVVCTALGVDMYDCVYPTRTARFGVALRDAGVLKLKNKACAGEEKQAIDPLCGCMVCRHYSQAALHRLLK-----------SGALGCQLVTYHNLAYMLGLMRRMRSAIMQGGQAFPHFVVGFLTTHYAWKNREEGVECRRKGECGMVPEWVREALAVAGIDV 441
            AL F +  R+ RARAAT+ LPHG + TPVFMPVGT+G IKG+ T Q+  + +  QI L NTYHLAL+PGTE+L ++ G LHEFMQWPRNLLTDSGGFQMVSL  L E++E GV+F+S VDG+ M+LTPE SIAHQNRIG+DI+M LDDVVSS+  D  RF EA  R++RWLDRC +AH+ P +QNLFGI+QGGLD S GGLRD+CL+ ++ RD PGYAIGGLAGGESKEAFWKVVA+CTA LPE KPRYLMGVGYPLDLVVC+ALGVDM+DCVYPTRTARFG A+  +G+LKLK+  C  +++  ID  C C VC+ Y++A L  LLK           +G++G  L+TYHN+ YML LMRR+R +I+   + F  FV  F+   +  +N                P+W  +AL  A I +
Sbjct:    6 ALSFDVLGRYHRARAATLTLPHGEVRTPVFMPVGTQGAIKGLTTPQMQEKPVDCQIFLANTYHLALRPGTEVLAQLPGKLHEFMQWPRNLLTDSGGFQMVSLSRLCEVSEHGVQFESFVDGSTMILTPEASIAHQNRIGADIIMALDDVVSSLADDDERFKEACGRTVRWLDRCIQAHAHPDKQNLFGIVQGGLDVSEGGLRDQCLSELIQRDLPGYAIGGLAGGESKEAFWKVVAKCTAQLPENKPRYLMGVGYPLDLVVCSALGVDMFDCVYPTRTARFGTAIVPSGLLKLKSAKCEHDDR-PIDDTCECFVCKKYTRAYLRVLLKKEETFGDAEETTGSIGAHLITYHNVTYMLNLMRRLRQSIID--EKFEQFVQNFMLQQFPDRN---------------YPQWAVDALTEAKISL 408          
BLAST of EWM24160.1 vs. NCBI_GenBank
Match: gi|470127440|ref|XP_004299677.1| (PREDICTED: queuine tRNA-ribosyltransferase-like isoform X2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 498.819 bits (1283), Expect = 1.615e-172
Identity = 255/409 (62.35%), Postives = 310/409 (75.79%), Query Frame = 0
Query:   33 ALCFHIHARWRRARAATVHLPHGPLATPVFMPVGTKGTIKGIPTEQLLHEDLSPQIILGNTYHLALQPGTELLEEMGGLHEFMQWPRNLLTDSGGFQMVSLLALAEITEEGVRFQSPVDGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVTVDHARFVEATARSIRWLDRCRKAHSRPREQNLFGIIQGGLDTSPGGLRDECLTAMVARDCPGYAIGGLAGGESKEAFWKVVAQCTAALPEGKPRYLMGVGYPLDLVVCTALGVDMYDCVYPTRTARFGVALRDAGVLKLKNKACAGEEKQAIDPLCGCMVCRHYSQAALHRLLKSGALGCQLVTYHNLAYMLGLMRRMRSAIMQGGQAFPHFVVGFLTTHYAWKNREEGVECRRKGECGMVPEWVREALAVAGIDV 441
            AL F + AR+ RARAA + LPH    TP+FMPVGT+GTIKG+ T+QL  E++  QIILGNTYHLAL+P +EL+++MGGLH+FM WPR +LTDSGGFQMVSLL LA+ITE+GV FQSPVDG  MLLTPE SI  QNRIG+DI+M LDDVV + T+   R  EA  R++RW+DRC  AH+RP EQNLFGI+QGGLD     LRD C+  +V R+ PGYAIGGLAGGESK++FW+VVAQCTAALPE KPRY+MGVGYPLD+VVC+ALG DMYDCVYPTRTARFG AL   GVLKLK+KA A ++ + IDP C CMVC+ Y++A +H L+   A+G QL++YHNL YML L R + S+I+QG   FP FV  FL T +             KG+   VPEWV  A+ VAGID+
Sbjct:    2 ALRFEVLARFNRARAAQLTLPHFVCQTPLFMPVGTQGTIKGLATDQL--EEIGCQIILGNTYHLALRPTSELIDDMGGLHKFMNWPRAMLTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESIQIQNRIGADIIMALDDVVKT-TITGPRIEEAMYRTLRWIDRCIAAHTRPNEQNLFGIVQGGLDPV---LRDICVRGLVERNLPGYAIGGLAGGESKDSFWRVVAQCTAALPEDKPRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALIPEGVLKLKHKAMA-KDTRPIDPTCACMVCKKYTRAYIHCLVTKDAMGSQLLSYHNLYYMLKLSRDLHSSIIQG--TFPEFVCNFLQTMFP------------KGD---VPEWVCNAMEVAGIDI 386          
BLAST of EWM24160.1 vs. NCBI_GenBank
Match: gi|301104791|ref|XP_002901480.1| (queuine tRNA-ribosyltransferase [Phytophthora infestans T30-4] >gi|262100955|gb|EEY59007.1| queuine tRNA-ribosyltransferase [Phytophthora infestans T30-4])

HSP 1 Score: 498.819 bits (1283), Expect = 2.371e-172
Identity = 248/421 (58.91%), Postives = 306/421 (72.68%), Query Frame = 0
Query:   33 ALCFHIHARWRRARAATVHLPHGPLATPVFMPVGTKGTIKGIPTEQLLHEDLSPQIILGNTYHLALQPGTELLEEM-GGLHEFMQWPRNLLTDSGGFQMVSLLALAEITEEGVRFQSPVDGTQMLLTPEMSIAHQNRIGSDIMMQLDDVVSSVTVDHARFVEATARSIRWLDRCRKAHSRPREQNLFGIIQGGLDTSPGGLRDECLTAMVARDCPGYAIGGLAGGESKEAFWKVVAQCTAALPEGKPRYLMGVGYPLDLVVCTALGVDMYDCVYPTRTARFGVALRDAGVLKLKNKACAGEEKQAIDPLCGCMVCRHYSQAALHRLLK-----------SGALGCQLVTYHNLAYMLGLMRRMRSAIMQGGQAFPHFVVGFLTTHYAWKNREEGVECRRKGECGMVPEWVREALAVAGIDV 441
            AL F +  R  RARAAT+ LPHG + TPV+M VGT+G IKG+ T+Q+  + +  QI L NTYHLAL+PGTE+L ++ G LHEFMQWPRNLLTDSGGFQMVSL  L +++E GV+F+S VDG+ MLLTPE SIAHQNRIG+DI+M LDDVVSS+T D  RF EA  R++RWLDRC +AH+ P +QNLFGI+QGGLD S GGLRD+CLT ++ RD PGYAIGGLAGGESKEAFWKVVA+CTA LPE KPRYLMGVGYPLDLVVC+ALGVDM+DCVYPTRTARFG A+  +G+LKLK+  C  + +  ID  C C VC+ Y++A L  LLK           +G++G  LVTYHN+ YML LMRR+R +I+   + F  FV  F+   +  +N                P+W  +AL  A I +
Sbjct:    6 ALSFEVLGRHHRARAATLTLPHGEVRTPVYMAVGTQGAIKGLTTQQMQEQPVDCQIFLANTYHLALRPGTEVLAQLPGKLHEFMQWPRNLLTDSGGFQMVSLSRLCQVSEHGVQFESFVDGSTMLLTPEASIAHQNRIGADIIMALDDVVSSLTDDDERFKEACGRTVRWLDRCIQAHAHPDKQNLFGIVQGGLDVSEGGLRDQCLTELIKRDLPGYAIGGLAGGESKEAFWKVVAKCTAQLPENKPRYLMGVGYPLDLVVCSALGVDMFDCVYPTRTARFGTAIVPSGLLKLKSAKCELDSR-PIDDTCECFVCKKYTRAYLRVLLKKEETFGDAEATTGSIGAHLVTYHNVTYMLNLMRRLRQSIID--RKFEQFVQNFMLQQFPERN---------------YPQWAVDALTEAKISL 408          
The following BLAST results are available for this feature:
BLAST of EWM24160.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105529|gb|EWM24160.1|0.000e+0100.00queuine trna-ribosyltransferase [Nannochloropsis g... [more]
gi|1214687256|gb|OWZ03610.1|6.245e-17459.43Queuine tRNA-ribosyltransferase [Phytophthora mega... [more]
gi|1079207936|ref|XP_018506678.1|1.621e-17362.84PREDICTED: queuine tRNA-ribosyltransferase-like [P... [more]
gi|695450395|ref|XP_009535468.1|3.176e-17358.87hypothetical protein PHYSODRAFT_355889 [Phytophtho... [more]
gi|669152222|ref|XP_008611673.1|5.378e-17358.55queuine tRNA-ribosyltransferase [Saprolegnia dicli... [more]
gi|675170591|ref|XP_008894180.1|7.699e-17358.67queuine tRNA-ribosyltransferase [Phytophthora para... [more]
gi|970664917|gb|KUG01710.1|1.173e-17258.67Queuine tRNA-ribosyltransferase [Phytophthora nico... [more]
gi|568014061|gb|ETL88238.1|1.344e-17258.67queuine tRNA-ribosyltransferase [Phytophthora para... [more]
gi|470127440|ref|XP_004299677.1|1.615e-17262.35PREDICTED: queuine tRNA-ribosyltransferase-like is... [more]
gi|301104791|ref|XP_002901480.1|2.371e-17258.91queuine tRNA-ribosyltransferase [Phytophthora infe... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6531rna6531Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications