EWM24157.1, cds6513 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24157.1 vs. NCBI_GenBank
Match: gi|585105526|gb|EWM24157.1| (ring fyve phd zinc finger-containing protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 347.051 bits (889), Expect = 1.300e-120 Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0
Query: 1 ITGGGREGGKEGGRLEAGFCYGQSRGAFVGVSVEGTLLFSRDRVNEKFYGKRSVTVRELLNGDMAPPTAAEPLYEALQEVMGMEGEGKGGEEPDLLDGGKVRERREEEGEEEGEDEEEEEEGERRWRNMEKNAEMKTFRVSHELRQTDEDKARDHRAAEPKTEGAGGARREEEEEEVVLM 180
ITGGGREGGKEGGRLEAGFCYGQSRGAFVGVSVEGTLLFSRDRVNEKFYGKRSVTVRELLNGDMAPPTAAEPLYEALQEVMGMEGEGKGGEEPDLLDGGKVRERREEEGEEEGEDEEEEEEGERRWRNMEKNAEMKTFRVSHELRQTDEDKARDHRAAEPKTEGAGGARREEEEEEVVLM
Sbjct: 1 ITGGGREGGKEGGRLEAGFCYGQSRGAFVGVSVEGTLLFSRDRVNEKFYGKRSVTVRELLNGDMAPPTAAEPLYEALQEVMGMEGEGKGGEEPDLLDGGKVRERREEEGEEEGEDEEEEEEGERRWRNMEKNAEMKTFRVSHELRQTDEDKARDHRAAEPKTEGAGGARREEEEEEVVLM 180
BLAST of EWM24157.1 vs. NCBI_GenBank
Match: gi|299115365|emb|CBN74194.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 75.8702 bits (185), Expect = 8.193e-13 Identity = 40/81 (49.38%), Postives = 52/81 (64.20%), Query Frame = 0
Query: 19 FCYGQSRGAFVGVSVEGTLLFSRDRVNEKFYGKRSVTVRELLNGDMAPPTAAEPLYEALQEVMGMEGEGKGGEEPDLLDGG 99
+ Y SRG F G+S+EG ++ SR VN KFYG R V+VR+LL+G +APP AA PLYEAL + G G ++ LL G
Sbjct: 471 YSYSHSRGLFAGLSLEGGVIVSRPDVNRKFYG-RQVSVRDLLSGSVAPPPAARPLYEAL------DNRGPGADQQRLLSQG 544
BLAST of EWM24157.1 vs. NCBI_GenBank
Match: gi|1069963680|ref|XP_018285868.1| (hypothetical protein PHYBLDRAFT_136624 [Phycomyces blakesleeanus NRRL 1555(-)] >gi|1026583140|gb|OAD67828.1| hypothetical protein PHYBLDRAFT_136624 [Phycomyces blakesleeanus NRRL 1555(-)]) HSP 1 Score: 73.559 bits (179), Expect = 4.296e-12 Identity = 33/65 (50.77%), Postives = 46/65 (70.77%), Query Frame = 0
Query: 14 RLEAGFCYGQSRGAFVGVSVEGTLLFSRDRVNEKFYGKRSVTVRELLNGDMAPPTAAEPLYEALQ 78
+ A + Y +++G F GVSVEG+++ +R+ NEKFYG R VT +ELLNG + PP AA+ LY AL
Sbjct: 155 HVSAIYSYSKTKGLFAGVSVEGSVILTRNDTNEKFYG-RKVTAKELLNGSVPPPPAADALYRALN 218
BLAST of EWM24157.1 vs. NCBI_GenBank
Match: gi|813186331|ref|XP_012207337.1| (hypothetical protein SPRG_21204 [Saprolegnia parasitica CBS 223.65] >gi|641527705|gb|KDO21977.1| hypothetical protein SPRG_21204 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 69.3218 bits (168), Expect = 6.319e-12 Identity = 37/89 (41.57%), Postives = 53/89 (59.55%), Query Frame = 0
Query: 1 ITGGGREGGKEGGRLEAGFCYGQSRGAFVGVSVEGTLLFSRDRVNEKFYGKRSVTVRELLNGDMAPPTAAEPLYEALQEVMGMEGEGKG 89
+ G E G G + + Y S+G F+G+SVEG+++ +R VN +FYGK VT +LL+G PP AA+PLY+AL M +E G
Sbjct: 15 VAAGAMEAGPGG--IAPCYSYSHSKGLFIGISVEGSVVLARPDVNLEFYGKE-VTAADLLSGRERPPVAAQPLYDALT--MAVESPANG 98
BLAST of EWM24157.1 vs. NCBI_GenBank
Match: gi|671693081|emb|CDS07812.1| (hypothetical protein LRAMOSA01761 [Lichtheimia ramosa]) HSP 1 Score: 72.0182 bits (175), Expect = 8.324e-12 Identity = 34/72 (47.22%), Postives = 45/72 (62.50%), Query Frame = 0
Query: 7 EGGKEGGRLEAGFCYGQSRGAFVGVSVEGTLLFSRDRVNEKFYGKRSVTVRELLNGDMAPPTAAEPLYEALQ 78
G + A + Y +SRG F G+SVEG+++ R N K YG+R VT ELLNG + PP A+PLY+ALQ
Sbjct: 142 SGTASINSVAAVYSYSKSRGLFAGISVEGSVILERSDANAKMYGRR-VTTFELLNGTIPPPPQADPLYKALQ 212
BLAST of EWM24157.1 vs. NCBI_GenBank
Match: gi|511000475|gb|EPB82012.1| (hypothetical protein HMPREF1544_11254 [Mucor circinelloides f. circinelloides 1006PhL]) HSP 1 Score: 72.7886 bits (177), Expect = 8.490e-12 Identity = 33/65 (50.77%), Postives = 47/65 (72.31%), Query Frame = 0
Query: 14 RLEAGFCYGQSRGAFVGVSVEGTLLFSRDRVNEKFYGKRSVTVRELLNGDMAPPTAAEPLYEALQ 78
+ A + Y ++RG F GVS+EG+++F+R+ NEK YG+R VT +ELLNG +APP A+ LY AL
Sbjct: 155 HISAIYSYSKTRGLFAGVSLEGSVIFTRNDANEKLYGER-VTAKELLNGSVAPPREADSLYRALN 218
BLAST of EWM24157.1 vs. NCBI_GenBank
Match: gi|299115198|emb|CBN74029.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 72.7886 bits (177), Expect = 9.204e-12 Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = 0
Query: 13 GRLEAGFCYGQSRGAFVGVSVEGTLLFSRDRVNEKFYGKRSVTVRELLNGDMAPPTAAEPLYEALQEV 80
G + A F Y S+G F+GVS+E + +R N FYG + V+ +ELL GD PP AAEPLY+AL+EV
Sbjct: 259 GGVAAAFSYAHSKGVFIGVSLEAATMVTRKDTNRDFYGTK-VSAQELLLGDFPPPKAAEPLYKALEEV 325
BLAST of EWM24157.1 vs. NCBI_GenBank
Match: gi|1026269902|gb|OAD02973.1| (hypothetical protein MUCCIDRAFT_141954 [Mucor circinelloides f. lusitanicus CBS 277.49]) HSP 1 Score: 72.4034 bits (176), Expect = 9.628e-12 Identity = 33/65 (50.77%), Postives = 47/65 (72.31%), Query Frame = 0
Query: 14 RLEAGFCYGQSRGAFVGVSVEGTLLFSRDRVNEKFYGKRSVTVRELLNGDMAPPTAAEPLYEALQ 78
+ A + Y ++RG F GVS+EG+++F+R+ NEK YG+R VT +ELLNG +APP A+ LY AL
Sbjct: 149 HISAIYSYSKTRGLFAGVSLEGSVIFTRNDANEKLYGER-VTAKELLNGSVAPPREADSLYRALN 212
BLAST of EWM24157.1 vs. NCBI_GenBank
Match: gi|758354128|dbj|GAN03787.1| (DUF500 and SH3 domain protein [Mucor ambiguus]) HSP 1 Score: 72.4034 bits (176), Expect = 1.198e-11 Identity = 33/65 (50.77%), Postives = 47/65 (72.31%), Query Frame = 0
Query: 14 RLEAGFCYGQSRGAFVGVSVEGTLLFSRDRVNEKFYGKRSVTVRELLNGDMAPPTAAEPLYEALQ 78
+ A + Y ++RG F GVS+EG+++F+R+ NEK YG+R VT +ELLNG +APP A+ LY AL
Sbjct: 149 HISAIYSYSKTRGLFAGVSLEGSVIFTRNDANEKLYGER-VTAKELLNGSVAPPREADSLYRALN 212
BLAST of EWM24157.1 vs. NCBI_GenBank
Match: gi|1183479833|gb|ORZ03672.1| (hypothetical protein BCR43DRAFT_483763 [Syncephalastrum racemosum]) HSP 1 Score: 71.633 bits (174), Expect = 1.831e-11 Identity = 42/102 (41.18%), Postives = 59/102 (57.84%), Query Frame = 0
Query: 14 RLEAGFCYGQSRGAFVGVSVEGTLLFSRDRVNEKFYGKRSVTVRELLNGDMAPPTAAEPLYEALQEVMGMEGEGKGGEEPDLLDGGKVRER-REEEGEEEGE 114
+ A + Y ++RG F GVS+EG+++ +R+ NEK YGKR VT +ELLNG +APP A+ LY AL G + L + G + R R E+GEE
Sbjct: 156 HVAAIYSYSKTRGLFAGVSLEGSVIITRNDANEKLYGKR-VTAKELLNGTVAPPPEADALYRAL-----------GAKFHSLGNTGAMYTRNRSEDGEENSS 245 The following BLAST results are available for this feature:
BLAST of EWM24157.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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