EWM30022.1, cds651 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30022.1 vs. NCBI_GenBank
Match: gi|585112646|gb|EWM30022.1| (SNARE associated Golgi protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 323.168 bits (827), Expect = 1.297e-111 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0 Query: 1 RGRCEAVRACGSCQSNPCRCNLCLCLLSCLRITGALDAVLGEQGLRLNLLLRLCPVVPYSFLNFAMGLTAARSEDFLLGCLVGMLPAVILLAYVGVAEGGGKGAVGEILESFGRRHPMETRAALGSGALLLVIAGWIVWRAARSKARAEEIRKQSVVDSMGWEM 164 RGRCEAVRACGSCQSNPCRCNLCLCLLSCLRITGALDAVLGEQGLRLNLLLRLCPVVPYSFLNFAMGLTAARSEDFLLGCLVGMLPAVILLAYVGVAEGGGKGAVGEILESFGRRHPMETRAALGSGALLLVIAGWIVWRAARSKARAEEIRKQSVVDSMGWEM Sbjct: 1 RGRCEAVRACGSCQSNPCRCNLCLCLLSCLRITGALDAVLGEQGLRLNLLLRLCPVVPYSFLNFAMGLTAARSEDFLLGCLVGMLPAVILLAYVGVAEGGGKGAVGEILESFGRRHPMETRAALGSGALLLVIAGWIVWRAARSKARAEEIRKQSVVDSMGWEM 164
BLAST of EWM30022.1 vs. NCBI_GenBank
Match: gi|873231341|emb|CEM08577.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 72.7886 bits (177), Expect = 3.519e-12 Identity = 34/90 (37.78%), Postives = 54/90 (60.00%), Query Frame = 0 Query: 21 NLCLCLLSCLRITGALDAVLGEQGLRLNLLLRLCPVVPYSFLNFAMGLTAARSEDFLLGCLVGMLPAVILLAYVG-----VAEGGGKGAV 105 + L++ R+ A+D V QGL++N LLRL PVVP+S N+ MG T++R +D+ +G + ++P L Y+G ++GGG G V Sbjct: 203 DFVESLVNKFRVIKAIDNVFETQGLKINFLLRLSPVVPFSAFNYVMGGTSSRYKDYAIGT-IAIIPGTALYVYIGAIPAIFSDGGGSGDV 291
BLAST of EWM30022.1 vs. NCBI_GenBank
Match: gi|1125521936|gb|OLE39612.1| (hypothetical protein AUI36_25700, partial [Cyanobacteria bacterium 13_1_40CM_2_61_4]) HSP 1 Score: 70.8626 bits (172), Expect = 2.306e-11 Identity = 32/61 (52.46%), Postives = 43/61 (70.49%), Query Frame = 0 Query: 35 ALDAVLGEQGLRLNLLLRLCPVVPYSFLNFAMGLTAARSEDFLLGCLVGMLPAVILLAYVG 95 A+D + +QGLR+ LL RL PV P++ LN+A GLT R D++LG LVGMLP I+ Y+G Sbjct: 93 AIDRAVAQQGLRIVLLTRLSPVFPFNVLNYAFGLTRVRLRDYVLGSLVGMLPGTIMYVYLG 153
BLAST of EWM30022.1 vs. NCBI_GenBank
Match: gi|1210260802|dbj|BAZ79797.1| (hypothetical protein NIES73_10430 [Sphaerospermopsis kisseleviana NIES-73]) HSP 1 Score: 66.2402 bits (160), Expect = 4.095e-10 Identity = 29/67 (43.28%), Postives = 44/67 (65.67%), Query Frame = 0 Query: 34 GALDAVLGEQGLRLNLLLRLCPVVPYSFLNFAMGLTAARSEDFLLGCLVGMLPAVILLAYVGVAEGG 100 A+D +G +GL++ LL RL P+ P++ LN+A G+TA +D+ LGC VGM+P I+ Y+G G Sbjct: 129 AAIDNAVGREGLKIVLLTRLSPIFPFNLLNYAFGVTAVSLKDYFLGC-VGMIPGTIMYVYIGSLAGN 194
BLAST of EWM30022.1 vs. NCBI_GenBank
Match: gi|873233189|emb|CEM03564.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 66.2402 bits (160), Expect = 8.660e-10 Identity = 31/70 (44.29%), Postives = 43/70 (61.43%), Query Frame = 0 Query: 26 LLSCLRITGALDAVLGEQGLRLNLLLRLCPVVPYSFLNFAMGLTAARSEDFLLGCLVGMLPAVILLAYVG 95 L ++ A+D V QGL+LN+LLRL PVVP+S N+ MG T R D+ +G L G++P L Y+G Sbjct: 169 LTDKFKVMRAIDKVFETQGLKLNILLRLSPVVPFSAFNYIMGGTRTRYRDYAIGTL-GIIPGTALYVYIG 237
BLAST of EWM30022.1 vs. NCBI_GenBank
Match: gi|1088316809|gb|OHB68508.1| (hypothetical protein A2Y77_08725 [Planctomycetes bacterium RBG_13_62_9]) HSP 1 Score: 63.929 bits (154), Expect = 1.803e-9 Identity = 29/61 (47.54%), Postives = 40/61 (65.57%), Query Frame = 0 Query: 35 ALDAVLGEQGLRLNLLLRLCPVVPYSFLNFAMGLTAARSEDFLLGCLVGMLPAVILLAYVG 95 A+D +GE+G +L LL RL P+ P+ LN+A GLT ++L G L+GMLP IL Y+G Sbjct: 85 AIDDAIGERGFQLVLLSRLSPISPFILLNYAFGLTKVSLREYLWGSLIGMLPGTILFVYLG 145
BLAST of EWM30022.1 vs. NCBI_GenBank
Match: gi|5916171|gb|AAD55929.1|AF148265_1 (hypothetical transmembrane protein [uncultured bacterium AH1]) HSP 1 Score: 64.3142 bits (155), Expect = 1.859e-9 Identity = 33/73 (45.21%), Postives = 43/73 (58.90%), Query Frame = 0 Query: 35 ALDAVLGEQGLRLNLLLRLCPVVPYSFLNFAMGLTAARSEDFLLGCLVGMLPAVILLAYVGVAEGGGKGAVGE 107 ALD V+GE GL+L LLRL P VP+ N+A+ +T R DF +G L G+ P V++ A G A G A G Sbjct: 93 ALDHVIGEDGLKLVFLLRLSPAVPFVLTNYALSITRVRLRDFFIGTL-GLAPIVVMYAAYGSASGATPNADGS 164
BLAST of EWM30022.1 vs. NCBI_GenBank
Match: gi|817699212|ref|WP_046661847.1| (TVP38/TMEM64 family protein [Microcystis aeruginosa] >gi|815965045|gb|AKE64190.1| DedA family protein, putative [Microcystis aeruginosa NIES-2549] >gi|1052160118|gb|AOC52586.1| DedA family protein, putative [Microcystis aeruginosa NIES-2481]) HSP 1 Score: 64.3142 bits (155), Expect = 1.969e-9 Identity = 28/65 (43.08%), Postives = 44/65 (67.69%), Query Frame = 0 Query: 35 ALDAVLGEQGLRLNLLLRLCPVVPYSFLNFAMGLTAARSEDFLLGCLVGMLPAVILLAYVGVAEG 99 A+D +G++GL++ LL RL P+ P++ LN+A G+T +D+LLGC GM+P I+ Y+G G Sbjct: 139 AIDEAVGKEGLKIVLLTRLSPIFPFTLLNYAYGVTGVSLKDYLLGC-AGMIPGTIMYVYIGSLAG 202
BLAST of EWM30022.1 vs. NCBI_GenBank
Match: gi|490388975|ref|WP_004268430.1| (TVP38/TMEM64 family protein [Microcystis aeruginosa] >gi|389883069|emb|CCI36510.1| Genome sequencing data, contig C310 [Microcystis aeruginosa PCC 9701]) HSP 1 Score: 64.3142 bits (155), Expect = 1.989e-9 Identity = 28/65 (43.08%), Postives = 44/65 (67.69%), Query Frame = 0 Query: 35 ALDAVLGEQGLRLNLLLRLCPVVPYSFLNFAMGLTAARSEDFLLGCLVGMLPAVILLAYVGVAEG 99 A+D +G++GL++ LL RL P+ P++ LN+A G+T +D+LLGC GM+P I+ Y+G G Sbjct: 139 AIDEAVGKEGLKIVLLTRLSPIFPFTLLNYAYGVTGVSLKDYLLGC-AGMIPGTIMYVYIGSLAG 202
BLAST of EWM30022.1 vs. NCBI_GenBank
Match: gi|488829068|ref|WP_002741474.1| (TVP38/TMEM64 family protein [Microcystis aeruginosa] >gi|159028470|emb|CAO87277.1| unnamed protein product [Microcystis aeruginosa PCC 7806] >gi|443335060|gb|ELS49543.1| SNARE associated Golgi family protein [Microcystis aeruginosa DIANCHI905] >gi|1181757361|gb|ARI80715.1| hypothetical protein BH695_1434 [Microcystis aeruginosa PCC 7806SL]) HSP 1 Score: 64.3142 bits (155), Expect = 2.246e-9 Identity = 28/65 (43.08%), Postives = 44/65 (67.69%), Query Frame = 0 Query: 35 ALDAVLGEQGLRLNLLLRLCPVVPYSFLNFAMGLTAARSEDFLLGCLVGMLPAVILLAYVGVAEG 99 A+D +G++GL++ LL RL P+ P++ LN+A G+T +D+LLGC GM+P I+ Y+G G Sbjct: 139 AIDEAVGKEGLKIVLLTRLSPIFPFTLLNYAYGVTGVSLKDYLLGC-AGMIPGTIMYVYIGSLAG 202 The following BLAST results are available for this feature:
BLAST of EWM30022.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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