EWM24168.1, cds6506 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24168.1 vs. NCBI_GenBank
Match: gi|585105540|gb|EWM24168.1| (Hly-III-related protein [Nannochloropsis gaditana]) HSP 1 Score: 378.637 bits (971), Expect = 5.051e-133 Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0
Query: 1 MAPNTENMPTSSSADTRPGPARVNNEGMGKNTIDPARTRTDRKEGFYVEAPSRASLVTATLRRGCCGCPPVRHVRNAPSFQHIPHITIGYRVGFSLRHCLASLFTFHNESINIWSHLLGTMYVFSVLVSFLRLERLHPNVDPIEYKAILTFLLSAVACLSFSTCYHTFGCMSVGPRPPPQALL 183
MAPNTENMPTSSSADTRPGPARVNNEGMGKNTIDPARTRTDRKEGFYVEAPSRASLVTATLRRGCCGCPPVRHVRNAPSFQHIPHITIGYRVGFSLRHCLASLFTFHNESINIWSHLLGTMYVFSVLVSFLRLERLHPNVDPIEYKAILTFLLSAVACLSFSTCYHTFGCMSVGPRPPPQALL
Sbjct: 1 MAPNTENMPTSSSADTRPGPARVNNEGMGKNTIDPARTRTDRKEGFYVEAPSRASLVTATLRRGCCGCPPVRHVRNAPSFQHIPHITIGYRVGFSLRHCLASLFTFHNESINIWSHLLGTMYVFSVLVSFLRLERLHPNVDPIEYKAILTFLLSAVACLSFSTCYHTFGCMSVGPRPPPQALL 183
BLAST of EWM24168.1 vs. NCBI_GenBank
Match: gi|213405054|ref|XP_002173299.1| (hemolysin-III family protein [Schizosaccharomyces japonicus yFS275] >gi|212001346|gb|EEB07006.1| hemolysin-III family protein [Schizosaccharomyces japonicus yFS275]) HSP 1 Score: 75.8702 bits (185), Expect = 7.878e-13 Identity = 43/100 (43.00%), Postives = 63/100 (63.00%), Query Frame = 0
Query: 79 SFQHIPHITIGYRVGFSLRHCLASLFTFHNESINIWSHLLGTMYVFSVLVSFLRLERLHPNVD-----PIEYKAI-LTFLLSAVACLSFSTCYHTFGCMS 172
+Q+ P+I GYR S R C+ S+ ++HNE++NIWSH+LG M+VF+ + F LHPN P+ + I L FLL+AV CL+ ST +HTF ++
Sbjct: 182 DWQNNPYILRGYRFYQSKRRCVKSILSWHNETVNIWSHMLG-MFVFAGICLF-----LHPNTQWWTDLPLSNRLIALVFLLAAVKCLACSTIWHTFASLA 275
BLAST of EWM24168.1 vs. NCBI_GenBank
Match: gi|66800759|ref|XP_629305.1| (hypothetical protein DDB_G0293072 [Dictyostelium discoideum AX4] >gi|60462686|gb|EAL60888.1| hypothetical protein DDB_G0293072 [Dictyostelium discoideum AX4]) HSP 1 Score: 74.7146 bits (182), Expect = 2.010e-12 Identity = 37/95 (38.95%), Postives = 54/95 (56.84%), Query Frame = 0
Query: 78 PSFQHIPHITIGYRVGFSLRHCLASLFTFHNESINIWSHLLGTMYVFSVLVSFLRLERLHPNVDPIEYKAILTFLLSAVACLSFSTCYHTFGCMS 172
P Q I GYRV FS + CL S+F HNE++NIW+HLLGT+ +F +L+ + RL + ++ F + A A + FS +HTF +S
Sbjct: 298 PYLQGNEFIATGYRVNFSYKLCLKSIFRLHNETLNIWTHLLGTI-LFLILMIYTLTSRLREDATSVDKFVFCMFFICAQAQMLFSATFHTFCSVS 391
BLAST of EWM24168.1 vs. NCBI_GenBank
Match: gi|805791390|ref|XP_012141995.1| (PREDICTED: progestin and adipoQ receptor family member 3 isoform X2 [Megachile rotundata]) HSP 1 Score: 70.0922 bits (170), Expect = 4.850e-11 Identity = 40/100 (40.00%), Postives = 58/100 (58.00%), Query Frame = 0
Query: 75 RNAPSF-QHIPHITIGYRVGFSLRHCLASLFTFHNESINIWSHLLGTMYVFSVLVSFLRLERLHPNVDPIEYKAILTFLLSAV-ACLSFSTCYHTFGCMS 172
+ AP + QH P+I GYR + + C+ S+F + NE++NIWSH+ G M F + + L L +H P+ K I+T LL AC+ S+ YHTF C S
Sbjct: 80 KEAPEYLQHNPYIRRGYRGYLTTKLCVESIFWWTNETVNIWSHIFGWMLFFGLTLYDLCLLNIHA---PMGDKVIVTLLLICFQACMILSSVYHTFSCRS 176
BLAST of EWM24168.1 vs. NCBI_GenBank
Match: gi|1013937334|gb|KYQ91030.1| (hypothetical protein DLAC_07930 [Dictyostelium lacteum]) HSP 1 Score: 70.0922 bits (170), Expect = 6.643e-11 Identity = 38/99 (38.38%), Postives = 61/99 (61.62%), Query Frame = 0
Query: 75 RNAPSF-QHIPHITIGYRVGFSLRHCLASLFTFHNESINIWSHLLGTMYVFSVLVSFLRLERLHPNVDPIEYKAILTFLLSAVACLSFSTCYHTFGCMS 172
+N PS+ Q +IT GYRV F + CL SLF HNE++NIW+HL+GT+ F +++ + +L L + +P++ F A++ + FST +H F +S
Sbjct: 212 QNLPSYLQGNEYITSGYRVNFPFKLCLMSLFKMHNETLNIWTHLIGTIGFFFLMI-YTQLTIL-VDAEPMDKFIFTIFFFGAISQMLFSTMFHLFCSVS 308
BLAST of EWM24168.1 vs. NCBI_GenBank
Match: gi|805791387|ref|XP_012141994.1| (PREDICTED: progestin and adipoQ receptor family member 3 isoform X1 [Megachile rotundata]) HSP 1 Score: 69.707 bits (169), Expect = 7.446e-11 Identity = 40/100 (40.00%), Postives = 58/100 (58.00%), Query Frame = 0
Query: 75 RNAPSF-QHIPHITIGYRVGFSLRHCLASLFTFHNESINIWSHLLGTMYVFSVLVSFLRLERLHPNVDPIEYKAILTFLLSAV-ACLSFSTCYHTFGCMS 172
+ AP + QH P+I GYR + + C+ S+F + NE++NIWSH+ G M F + + L L +H P+ K I+T LL AC+ S+ YHTF C S
Sbjct: 80 KEAPEYLQHNPYIRRGYRGYLTTKLCVESIFWWTNETVNIWSHIFGWMLFFGLTLYDLCLLNIHA---PMGDKVIVTLLLICFQACMILSSVYHTFSCRS 176
BLAST of EWM24168.1 vs. NCBI_GenBank
Match: gi|955162207|emb|CUG93827.1| (unnamed protein product, partial [Bodo saltans]) HSP 1 Score: 68.9366 bits (167), Expect = 7.674e-11 Identity = 51/176 (28.98%), Postives = 80/176 (45.45%), Query Frame = 0
Query: 8 MPTSSSADTRPGPARVNNEGMGKNTIDPARTRTDRKEGFYVEAPSRASLVTATLRRGCCGCPPVRHVRNAPSFQHI-------------PHITIGYRVGFSLRHCLASLFTFHNESINIWSHLLGTMYVFSVLVSFLRLERLHPNVDPIEYKAILTFLLSAVACLSFSTCYHTFGC 170
MPT R G A N+ M +T D ART T+ + + E P R + R + +R + H+ P I GYR +++ CL S+FT HNE+ N+W+HLLG ++ + V F + + P + + + ++ F + VAC+ S YH F C
Sbjct: 1 MPTVGLKQRRSGSA--NHRRM--DTDDDARTHTEDVQS-WEEDPLRLRSPAPSEPRDSPKNAGIESIRPTDTTLHLYDYQDAPAWARGNPFILRGYRAQYTMSMCLRSIFTIHNETGNVWTHLLGMLFFLTCSVMFFS-QVMKPML--VHFVVLIPFSFACVACMGLSAAYHLFSC 168
BLAST of EWM24168.1 vs. NCBI_GenBank
Match: gi|831787061|ref|XP_012758307.1| (hypothetical protein SAMD00019534_008860 [Acytostelium subglobosum LB1] >gi|735858939|dbj|GAM17711.1| hypothetical protein SAMD00019534_008860 [Acytostelium subglobosum LB1]) HSP 1 Score: 69.707 bits (169), Expect = 8.265e-11 Identity = 39/98 (39.80%), Postives = 57/98 (58.16%), Query Frame = 0
Query: 76 NAPSF-QHIPHITIGYRVGFSLRHCLASLFTFHNESINIWSHLLGTMYVFSVLVSFLRLERLHPNVDPIEYKAILTFLLSAVACLSFSTCYHTFGCMS 172
N P++ Q +I GYRV FS R C+ SLF HNE++NIW+HLL T+ F +++ + LE + + P + F L A A + FS +HTF +S
Sbjct: 146 NLPAYLQGNEYIQTGYRVNFSYRLCIKSLFRIHNETLNIWTHLLATVMFFILMI--VTLEYILVDPSPTDKFIFTVFFLCAQAQMLFSAIFHTFCSVS 241
BLAST of EWM24168.1 vs. NCBI_GenBank
Match: gi|1032652665|gb|OAQ33938.1| (HlyIII-domain-containing protein [Mortierella elongata AG-77]) HSP 1 Score: 68.9366 bits (167), Expect = 1.330e-10 Identity = 48/145 (33.10%), Postives = 71/145 (48.97%), Query Frame = 0
Query: 31 NTIDPARTRTDRKEGFYVEAPSRASLVTATLRRGCCGCPPVRHVRNAPSF-QHIPHITIGYRV-GFSLRHCLASLFTFHNESINIWSHLLGTMYVFSVL-VSFLRLERLHPNVDPIEYKAILTFLLSAVACLSFSTCYHTFGCMS 172
+TI R+ TD K + E A T + G G P+ H + P + Q P I GYR FS + C ASL HNES+N+WSHL+G + V+ +++ ++ + V + F+ A+ CLS S +H F C S
Sbjct: 32 DTIHSIRSVTDMKHN-HEEQDDEADETTPVIGSG--GHGPICHWDDLPVWMQDNPAIFTGYRRPTFSYKKCAASLGFLHNESVNVWSHLIGAIACIVVVPLAYFKIFHILETVHWTDVMHFYIFMAGAILCLSMSALFHLFSCHS 173
BLAST of EWM24168.1 vs. NCBI_GenBank
Match: gi|1160563673|ref|XP_020429884.1| (hypothetical protein PPL_09254 [Polysphondylium pallidum PN500] >gi|281203559|gb|EFA77756.1| hypothetical protein PPL_09254 [Polysphondylium pallidum PN500]) HSP 1 Score: 69.3218 bits (168), Expect = 1.429e-10 Identity = 37/95 (38.95%), Postives = 53/95 (55.79%), Query Frame = 0
Query: 78 PSFQHIPHITIGYRVGFSLRHCLASLFTFHNESINIWSHLLGTMYVFSVLVSFLRLERLHPNVDPIEYKAILTFLLSAVACLSFSTCYHTFGCMS 172
P Q I GYRV FS R C S+F HNE++NIW+HLL T+ F +++ + + N PI+ F + A A ++FST +HTF +S
Sbjct: 139 PYLQGNEFIQTGYRVNFSYRLCFLSIFRLHNETLNIWTHLLATILFFILMI--VTSTSILENPQPIDKFIFTVFFICAQAQMAFSTIFHTFCSVS 231 The following BLAST results are available for this feature:
BLAST of EWM24168.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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