EWM24174.1, cds6499 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24174.1 vs. NCBI_GenBank
Match: gi|585105550|gb|EWM24174.1| (hypothetical protein Naga_101672g1 [Nannochloropsis gaditana]) HSP 1 Score: 145.591 bits (366), Expect = 2.904e-44 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
Query: 1 MTAALNAANERANEIFRQEKIGYLDIAKVVEGAMESHKKDWKEAPSLEDIVAVDAWARVRVDELAEKMKYVAA 73
MTAALNAANERANEIFRQEKIGYLDIAKVVEGAMESHKKDWKEAPSLEDIVAVDAWARVRVDELAEKMKYVAA
Sbjct: 1 MTAALNAANERANEIFRQEKIGYLDIAKVVEGAMESHKKDWKEAPSLEDIVAVDAWARVRVDELAEKMKYVAA 73
BLAST of EWM24174.1 vs. NCBI_GenBank
Match: gi|298706797|emb|CBJ29720.1| (1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor [Ectocarpus siliculosus]) HSP 1 Score: 90.8929 bits (224), Expect = 6.985e-20 Identity = 43/69 (62.32%), Postives = 54/69 (78.26%), Query Frame = 0
Query: 1 MTAALNAANERANEIFRQEKIGYLDIAKVVEGAMESHKKDWKEAPSLEDIVAVDAWARVRVDELAEKMK 69
MTAA+NAANERANEIFR+E I ++DI +V+E ME+HK D PS+EDIV VD WAR +VDE A ++K
Sbjct: 357 MTAAMNAANERANEIFRKEVISFVDIPRVIEVVMEAHKADLMATPSIEDIVNVDLWARGKVDEAAAQLK 425
BLAST of EWM24174.1 vs. NCBI_GenBank
Match: gi|115381248|gb|ABI96273.1| (chloroplast 1-deoxy-D-xylulose 5-phosphate reductoisomerase precursor [Hanusia phi]) HSP 1 Score: 87.0409 bits (214), Expect = 2.215e-18 Identity = 42/63 (66.67%), Postives = 48/63 (76.19%), Query Frame = 0
Query: 1 MTAALNAANERANEIFRQEKIGYLDIAKVVEGAMESHKKDWKEAPSLEDIVAVDAWARVRVDE 63
MTA LNAANE+ANE+FR +IGYLDI KV+E AME+HK D PSLEDIV +D WAR V E
Sbjct: 397 MTAVLNAANEQANEMFRNGEIGYLDIFKVIEKAMEAHKADLSLKPSLEDIVEIDGWARKFVKE 459
BLAST of EWM24174.1 vs. NCBI_GenBank
Match: gi|551642935|ref|XP_005824263.1| (1-deoxy-D-xylulose 5-phosphate reductoisomerase [Guillardia theta CCMP2712] >gi|428168337|gb|EKX37283.1| 1-deoxy-D-xylulose 5-phosphate reductoisomerase [Guillardia theta CCMP2712]) HSP 1 Score: 86.2705 bits (212), Expect = 4.204e-18 Identity = 41/63 (65.08%), Postives = 48/63 (76.19%), Query Frame = 0
Query: 1 MTAALNAANERANEIFRQEKIGYLDIAKVVEGAMESHKKDWKEAPSLEDIVAVDAWARVRVDE 63
MTA LNAANE+ANE+FR +IGYLDI KV+E AME+HK D PSL+DIV +D WAR V E
Sbjct: 396 MTAVLNAANEQANEMFRNGEIGYLDIFKVIEKAMEAHKSDLSMKPSLDDIVEIDGWARNFVKE 458
BLAST of EWM24174.1 vs. NCBI_GenBank
Match: gi|115381244|gb|ABI96271.1| (chloroplast 1-deoxy-D-xylulose 5-phosphate reductoisomerase precursor [Prymnesium parvum]) HSP 1 Score: 80.1073 bits (196), Expect = 5.319e-16 Identity = 38/69 (55.07%), Postives = 50/69 (72.46%), Query Frame = 0
Query: 1 MTAALNAANERANEIFRQEKIGYLDIAKVVEGAMESHKKDWKEAPSLEDIVAVDAWARVRVDELAEKMK 69
MT ALNAANE ANE+FR K + I KV+E ME+HK D+K PSLEDI+ +D+WAR +V E A +++
Sbjct: 391 MTCALNAANEMANELFRAGKFDFFGIPKVIEQTMEAHKADFKADPSLEDILEIDSWARRQVVEEAARLE 459
BLAST of EWM24174.1 vs. NCBI_GenBank
Match: gi|676388439|ref|XP_009037498.1| (hypothetical protein AURANDRAFT_2913, partial [Aureococcus anophagefferens] >gi|323451843|gb|EGB07719.1| hypothetical protein AURANDRAFT_2913, partial [Aureococcus anophagefferens]) HSP 1 Score: 78.9518 bits (193), Expect = 1.111e-15 Identity = 36/58 (62.07%), Postives = 44/58 (75.86%), Query Frame = 0
Query: 1 MTAALNAANERANEIFRQEKIGYLDIAKVVEGAMESHKKDWKEAPSLEDIVAVDAWAR 58
MT ALNAANE+ANE+FR+ YLDI K +E AME+HK D+ PSL+DI+ VD WAR
Sbjct: 335 MTGALNAANEQANEMFREGAFDYLDIPKAIEAAMENHKSDFIAKPSLQDIIDVDLWAR 392
BLAST of EWM24174.1 vs. NCBI_GenBank
Match: gi|209402475|gb|ACI45960.1| (putative plastid 1-deoxy-D-xylulose 5-phosphate reductoisomerase precursor [Pyropia yezoensis]) HSP 1 Score: 77.411 bits (189), Expect = 5.137e-15 Identity = 33/70 (47.14%), Postives = 51/70 (72.86%), Query Frame = 0
Query: 2 TAALNAANERANEIFRQEKIGYLDIAKVVEGAMESHKKDWKEAPSLEDIVAVDAWARVRVDELAEKMKYV 71
TA +NAANE A E+FRQ+K+ YL I K++E +++H+ DW PSL+DIVA+D++AR V+ + +Y+
Sbjct: 356 TAVINAANEAAVELFRQDKVHYLAIPKLIEATLDAHRSDWLANPSLDDIVALDSYARTVVNGFVDAGRYL 425
BLAST of EWM24174.1 vs. NCBI_GenBank
Match: gi|115381252|gb|ABI96275.1| (chloroplast 1-deoxy-D-xylulose 5-phosphate reductoisomerase precursor [Pyropia yezoensis]) HSP 1 Score: 77.411 bits (189), Expect = 5.344e-15 Identity = 33/70 (47.14%), Postives = 51/70 (72.86%), Query Frame = 0
Query: 2 TAALNAANERANEIFRQEKIGYLDIAKVVEGAMESHKKDWKEAPSLEDIVAVDAWARVRVDELAEKMKYV 71
TA +NAANE A E+FRQ+K+ YL I K++E +++H+ DW PSL+DIVA+D++AR V+ + +Y+
Sbjct: 356 TAVINAANEAAVELFRQDKVHYLAIPKLIEATLDAHRSDWLANPSLDDIVALDSYARTVVNGFVDAGRYL 425
BLAST of EWM24174.1 vs. NCBI_GenBank
Match: gi|922856925|gb|KOO25229.1| (1-deoxy-d-xylulose 5-phosphate reductoisomerase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 77.411 bits (189), Expect = 5.475e-15 Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 0
Query: 1 MTAALNAANERANEIFRQEKIGYLDIAKVVEGAMESHKKDWKEAPSLEDIVAVDAWARVRVDELAEKM 68
MT ALNAANE ANE+FR + I KV+E ME+H+ D+ + P+LEDIV VDAWAR +V A+++
Sbjct: 394 MTGALNAANEMANELFRAGSFDFFGIPKVIEKTMEAHQPDFLQNPTLEDIVRVDAWAREQVKAEAKRL 461
BLAST of EWM24174.1 vs. NCBI_GenBank
Match: gi|938303699|gb|KPQ37196.1| (1-deoxy-D-xylulose-5-phosphate reductoisomerase Dxr [Phormidesmis priestleyi Ana]) HSP 1 Score: 76.6406 bits (187), Expect = 8.453e-15 Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 0
Query: 1 MTAALNAANERANEIFRQEKIGYLDIAKVVEGAMESHKKDWKEAPSLEDIVAVDAWARVRVDELAEKMKYVAA 73
MTA LNAANE+A +F +EKI YL+I KV+E + H+ D AP+L+DI+AVD+WAR V E A + V A
Sbjct: 321 MTAVLNAANEQAVALFLEEKIHYLEIPKVIEKVCDRHRSDLNTAPNLDDILAVDSWARTAVSEAAANLTAVIA 393 The following BLAST results are available for this feature:
BLAST of EWM24174.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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