EWM24176.1, cds6497 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24176.1 vs. NCBI_GenBank
Match: gi|585105554|gb|EWM24176.1| (hypothetical protein Naga_100955g1 [Nannochloropsis gaditana]) HSP 1 Score: 1049.65 bits (2713), Expect = 0.000e+0 Identity = 540/540 (100.00%), Postives = 540/540 (100.00%), Query Frame = 0 Query: 1 MTIPLPLFYCLLVWAVASLIRCRRQRQNASPCVYRYGRCTVSLTSLAIVGEIKASGSRSASSPALPLPSVLPLARHQAPRSRKAWCQGQNFSVLVFSVGQILVCLFLAWNLGYTLLHSTFTWPRLGPSISLPSHHSPNLPAERPRPRRLSTASSSMSSFPASPSGPTHPPSSTAFHVATRLRPLSLLSPATGHNTLTSSAPSWFILWLASFLSLSIHEWGHARQAVKEGIGYQAIGVYFAFGLFPGAYVILDPFLLRALPPLAQLRILAAGVWQNLLLCLFTGLLLFFNLLPSLLSTPTSGLLFLPPPLPPSSPLASLFRPGHVLASLQDLSTPSLPAWEEAVQIQIEKISQRASAFRNGIPSPHEANATVTLLLHALPPPTPPSTTSPFSSKIEAVERTGLLQADTFCTSLPPFAPHHFQQEGRGRLPTCCTFEALTGQGRDRKRGAGEEEEGRDTTCFAAYDLGVGTSSLPSSSSSLFPHHSSFVTLACLPARDVILHSTLSPPPPPPPPPPPPPPPPLPPPPPPPPPPRIFPSASGQ 540 MTIPLPLFYCLLVWAVASLIRCRRQRQNASPCVYRYGRCTVSLTSLAIVGEIKASGSRSASSPALPLPSVLPLARHQAPRSRKAWCQGQNFSVLVFSVGQILVCLFLAWNLGYTLLHSTFTWPRLGPSISLPSHHSPNLPAERPRPRRLSTASSSMSSFPASPSGPTHPPSSTAFHVATRLRPLSLLSPATGHNTLTSSAPSWFILWLASFLSLSIHEWGHARQAVKEGIGYQAIGVYFAFGLFPGAYVILDPFLLRALPPLAQLRILAAGVWQNLLLCLFTGLLLFFNLLPSLLSTPTSGLLFLPPPLPPSSPLASLFRPGHVLASLQDLSTPSLPAWEEAVQIQIEKISQRASAFRNGIPSPHEANATVTLLLHALPPPTPPSTTSPFSSKIEAVERTGLLQADTFCTSLPPFAPHHFQQEGRGRLPTCCTFEALTGQGRDRKRGAGEEEEGRDTTCFAAYDLGVGTSSLPSSSSSLFPHHSSFVTLACLPARDVILHSTLSPPPPPPPPPPPPPPPPLPPPPPPPPPPRIFPSASGQ Sbjct: 1 MTIPLPLFYCLLVWAVASLIRCRRQRQNASPCVYRYGRCTVSLTSLAIVGEIKASGSRSASSPALPLPSVLPLARHQAPRSRKAWCQGQNFSVLVFSVGQILVCLFLAWNLGYTLLHSTFTWPRLGPSISLPSHHSPNLPAERPRPRRLSTASSSMSSFPASPSGPTHPPSSTAFHVATRLRPLSLLSPATGHNTLTSSAPSWFILWLASFLSLSIHEWGHARQAVKEGIGYQAIGVYFAFGLFPGAYVILDPFLLRALPPLAQLRILAAGVWQNLLLCLFTGLLLFFNLLPSLLSTPTSGLLFLPPPLPPSSPLASLFRPGHVLASLQDLSTPSLPAWEEAVQIQIEKISQRASAFRNGIPSPHEANATVTLLLHALPPPTPPSTTSPFSSKIEAVERTGLLQADTFCTSLPPFAPHHFQQEGRGRLPTCCTFEALTGQGRDRKRGAGEEEEGRDTTCFAAYDLGVGTSSLPSSSSSLFPHHSSFVTLACLPARDVILHSTLSPPPPPPPPPPPPPPPPLPPPPPPPPPPRIFPSASGQ 540
BLAST of EWM24176.1 vs. NCBI_GenBank
Match: gi|1050590962|ref|XP_017616820.1| (PREDICTED: membrane-bound transcription factor site-2 protease homolog [Gossypium arboreum]) HSP 1 Score: 98.2117 bits (243), Expect = 5.024e-18 Identity = 58/153 (37.91%), Postives = 82/153 (53.59%), Query Frame = 0 Query: 206 LWLASFLSLSIHEWGHARQAVKEGIGYQAIGVYFAFGLFPGAYVILDPFLLRALPPLAQLRILAAGVWQNLLLCLFTGLLLFFN---LLPSLLSTPTSGLLFLPPPLPPSSPLASLFRPGHVLASLQDLSTPSLPAWEEAVQIQIEKISQRAS 355 L++++ +S+S+HE+GHA EGI + I V+ A LFPGA V D LL+ALP L LR+ AG+W N + C GLLLF L P + + P L +SPL+ PG +ASL D + S+ W E + +KI +S Sbjct: 119 LFISTLVSVSVHEFGHAIALASEGIQLEYIAVFIAV-LFPGALVAFDYDLLQALPRLTSLRVYCAGIWHNAVFCALCGLLLFLRPVILFPFYMHAES------PLILEVASPLSEFLSPGDAIASLDDAAIHSMQDWIEMTALLDKKILHNSS 264
BLAST of EWM24176.1 vs. NCBI_GenBank
Match: gi|1029086462|ref|XP_016703388.1| (PREDICTED: membrane-bound transcription factor site-2 protease homolog isoform X2 [Gossypium hirsutum]) HSP 1 Score: 97.4413 bits (241), Expect = 5.485e-18 Identity = 59/156 (37.82%), Postives = 83/156 (53.21%), Query Frame = 0 Query: 206 LWLASFLSLSIHEWGHARQAVKEGIGYQAIGVYFAFGLFPGAYVILDPFLLRALPPLAQLRILAAGVWQNLLLCLFTGLLLFFN---LLPSLLSTPTSGLLFLPPPLPPSSPLASLFRPGHVLASLQDLSTPSLPAWEEAVQIQIEKISQRASAFR 358 L++++ +S+S+HE+GHA EGI + I V+ A LFPGA V D LL+ALP L LR+ AG+W N + C GLLLF L P + + P L +SPL+ PG +ASL + S+ W E + +KI Q +S R Sbjct: 62 LFISTLVSVSVHEFGHAIALASEGIQLEYIAVFIAV-LFPGALVAFDYDLLQALPRLTSLRVYCAGIWHNAVFCALCGLLLFLQPVILFPFYMHAES------PLVLEVASPLSEFLSPGDAIASLDGAAIHSVQNWMEMTALLDKKILQNSSDSR 210
BLAST of EWM24176.1 vs. NCBI_GenBank
Match: gi|763814178|gb|KJB81030.1| (hypothetical protein B456_013G126100 [Gossypium raimondii]) HSP 1 Score: 97.4413 bits (241), Expect = 6.337e-18 Identity = 59/156 (37.82%), Postives = 83/156 (53.21%), Query Frame = 0 Query: 206 LWLASFLSLSIHEWGHARQAVKEGIGYQAIGVYFAFGLFPGAYVILDPFLLRALPPLAQLRILAAGVWQNLLLCLFTGLLLFFN---LLPSLLSTPTSGLLFLPPPLPPSSPLASLFRPGHVLASLQDLSTPSLPAWEEAVQIQIEKISQRASAFR 358 L++++ +S+S+HE+GHA EGI + I V+ A LFPGA V D LL+ALP L LR+ AG+W N + C GLLLF L P + + P L +SPL+ PG +ASL + S+ W E + +KI Q +S R Sbjct: 119 LFISTLVSVSVHEFGHAIALASEGIQLEYIAVFIAV-LFPGALVAFDYDLLQALPRLTSLRVYCAGIWHNAVFCALCGLLLFLQPVILFPFYIHAES------PLVLEVASPLSEFLSPGDAIASLDGAAIHSVQNWMEMTALLDKKILQNSSDSR 267
BLAST of EWM24176.1 vs. NCBI_GenBank
Match: gi|1029086460|ref|XP_016703387.1| (PREDICTED: membrane-bound transcription factor site-2 protease homolog isoform X1 [Gossypium hirsutum]) HSP 1 Score: 97.0561 bits (240), Expect = 7.627e-18 Identity = 59/156 (37.82%), Postives = 83/156 (53.21%), Query Frame = 0 Query: 206 LWLASFLSLSIHEWGHARQAVKEGIGYQAIGVYFAFGLFPGAYVILDPFLLRALPPLAQLRILAAGVWQNLLLCLFTGLLLFFN---LLPSLLSTPTSGLLFLPPPLPPSSPLASLFRPGHVLASLQDLSTPSLPAWEEAVQIQIEKISQRASAFR 358 L++++ +S+S+HE+GHA EGI + I V+ A LFPGA V D LL+ALP L LR+ AG+W N + C GLLLF L P + + P L +SPL+ PG +ASL + S+ W E + +KI Q +S R Sbjct: 62 LFISTLVSVSVHEFGHAIALASEGIQLEYIAVFIAV-LFPGALVAFDYDLLQALPRLTSLRVYCAGIWHNAVFCALCGLLLFLQPVILFPFYMHAES------PLVLEVASPLSEFLSPGDAIASLDGAAIHSVQNWMEMTALLDKKILQNSSDSR 210
BLAST of EWM24176.1 vs. NCBI_GenBank
Match: gi|823264695|ref|XP_012465090.1| (PREDICTED: membrane-bound transcription factor site-2 protease homolog [Gossypium raimondii] >gi|763814177|gb|KJB81029.1| hypothetical protein B456_013G126100 [Gossypium raimondii]) HSP 1 Score: 97.0561 bits (240), Expect = 9.390e-18 Identity = 59/156 (37.82%), Postives = 83/156 (53.21%), Query Frame = 0 Query: 206 LWLASFLSLSIHEWGHARQAVKEGIGYQAIGVYFAFGLFPGAYVILDPFLLRALPPLAQLRILAAGVWQNLLLCLFTGLLLFFN---LLPSLLSTPTSGLLFLPPPLPPSSPLASLFRPGHVLASLQDLSTPSLPAWEEAVQIQIEKISQRASAFR 358 L++++ +S+S+HE+GHA EGI + I V+ A LFPGA V D LL+ALP L LR+ AG+W N + C GLLLF L P + + P L +SPL+ PG +ASL + S+ W E + +KI Q +S R Sbjct: 119 LFISTLVSVSVHEFGHAIALASEGIQLEYIAVFIAV-LFPGALVAFDYDLLQALPRLTSLRVYCAGIWHNAVFCALCGLLLFLQPVILFPFYIHAES------PLVLEVASPLSEFLSPGDAIASLDGAAIHSVQNWMEMTALLDKKILQNSSDSR 267
BLAST of EWM24176.1 vs. NCBI_GenBank
Match: gi|1029020621|ref|XP_016674165.1| (PREDICTED: membrane-bound transcription factor site-2 protease homolog [Gossypium hirsutum]) HSP 1 Score: 94.7449 bits (234), Expect = 5.626e-17 Identity = 57/153 (37.25%), Postives = 81/153 (52.94%), Query Frame = 0 Query: 206 LWLASFLSLSIHEWGHARQAVKEGIGYQAIGVYFAFGLFPGAYVILDPFLLRALPPLAQLRILAAGVWQNLLLCLFTGLLLFFN---LLPSLLSTPTSGLLFLPPPLPPSSPLASLFRPGHVLASLQDLSTPSLPAWEEAVQIQIEKISQRAS 355 L++++ +S+S+HE+GHA EGI + I V+ A LFPGA V D LL+ALP L LR+ AG+W N + C GLLLF L P + + P L +SPL+ PG +ASL + S+ W E + +KI +S Sbjct: 119 LFISTLVSVSVHEFGHAIALASEGIQLEYIAVFIAV-LFPGALVAFDYDLLQALPRLTSLRVYCAGIWHNAVFCALCGLLLFLRPVILFPFYMHAES------PLILEVASPLSEFLSPGDAIASLDGAAIHSMQDWIEMTALLDKKILHNSS 264
BLAST of EWM24176.1 vs. NCBI_GenBank
Match: gi|1063500044|ref|XP_007031009.2| (PREDICTED: membrane-bound transcription factor site-2 protease homolog [Theobroma cacao]) HSP 1 Score: 94.3597 bits (233), Expect = 7.514e-17 Identity = 56/153 (36.60%), Postives = 80/153 (52.29%), Query Frame = 0 Query: 206 LWLASFLSLSIHEWGHARQAVKEGIGYQAIGVYFAFGLFPGAYVILDPFLLRALPPLAQLRILAAGVWQNLLLCLFTGLLLFFN---LLPSLLSTPTSGLLFLPPPLPPSSPLASLFRPGHVLASLQDLSTPSLPAWEEAVQIQIEKISQRAS 355 L++++ S+S+HE+GHA EGI + I V+ A LFPGA V D LL+ALP L LR+ AG+W N + C GLLLF L P + + L + P+SPL+ PG + SL + + W E + +KI Q +S Sbjct: 120 LFVSTLFSVSVHEFGHAVALASEGIQLEYIAVFLAV-LFPGALVAFDHDLLQALPRLTALRVYCAGIWHNAVFCAVCGLLLFLKPVILFPFYIHAESP----LVLDVAPASPLSEFLSPGDAIVSLDGVRIHDVQEWVEMTSLLDKKIRQNSS 267
BLAST of EWM24176.1 vs. NCBI_GenBank
Match: gi|508719614|gb|EOY11511.1| (Protease m50 membrane-bound transcription factor site 2 protease, putative [Theobroma cacao]) HSP 1 Score: 94.3597 bits (233), Expect = 7.718e-17 Identity = 56/153 (36.60%), Postives = 80/153 (52.29%), Query Frame = 0 Query: 206 LWLASFLSLSIHEWGHARQAVKEGIGYQAIGVYFAFGLFPGAYVILDPFLLRALPPLAQLRILAAGVWQNLLLCLFTGLLLFFN---LLPSLLSTPTSGLLFLPPPLPPSSPLASLFRPGHVLASLQDLSTPSLPAWEEAVQIQIEKISQRAS 355 L++++ S+S+HE+GHA EGI + I V+ A LFPGA V D LL+ALP L LR+ AG+W N + C GLLLF L P + + L + P+SPL+ PG + SL + + W E + +KI Q +S Sbjct: 120 LFVSTLFSVSVHEFGHAVALASEGIQLEYIAVFLAV-LFPGALVAFDHDLLQALPRLTALRVYCAGIWHNAVFCAVCGLLLFLKPVILFPFYIHAESP----LVLDVAPASPLSEFLSPGDAIVSLDGVRIHDVQEWVEMTSLLDKKIRQNSS 267
BLAST of EWM24176.1 vs. NCBI_GenBank
Match: gi|1204900910|ref|XP_021282585.1| (membrane-bound transcription factor site-2 protease homolog [Herrania umbratica]) HSP 1 Score: 94.3597 bits (233), Expect = 7.858e-17 Identity = 55/153 (35.95%), Postives = 81/153 (52.94%), Query Frame = 0 Query: 206 LWLASFLSLSIHEWGHARQAVKEGIGYQAIGVYFAFGLFPGAYVILDPFLLRALPPLAQLRILAAGVWQNLLLCLFTGLLLFFN---LLPSLLSTPTSGLLFLPPPLPPSSPLASLFRPGHVLASLQDLSTPSLPAWEEAVQIQIEKISQRAS 355 L++++ +S+++HE+GHA EGI + I V+ A LFPGA V D LL+ALP L LR+ AG+W N + C GLLLF L P + + L + P+SPL+ PG + SL + + W E + +KI Q +S Sbjct: 120 LFVSTLVSVAVHEFGHAVALASEGIQLEYIAVFIAV-LFPGALVAFDHDLLQALPRLTALRVYCAGIWHNAVFCAVCGLLLFLKPVILFPFYIHAESP----LVLDVAPASPLSEFLSPGDAIVSLDGVRIHDVQDWVEMTSVLDKKIRQNSS 267 The following BLAST results are available for this feature:
BLAST of EWM24176.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|