EWM24177.1, cds6495 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24177.1 vs. NCBI_GenBank
Match: gi|585105557|gb|EWM24177.1| (Protein of unknown function DUF1275 [Nannochloropsis gaditana]) HSP 1 Score: 654.055 bits (1686), Expect = 0.000e+0 Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0
Query: 1 MLKPVADAFLLLSSSQACRHSLHRRHVPFTAKLSRSDISAKDISAVISICLMPDRVPLVHRHRTPYHFHYEDEDEERRIPPSQGQEGSDPFEHTHIGSSSSSSHSDRPPSRGLSPPLTILRAKHPAAAALQHRPTTTVAHGHRSPSPTPKSAPPSLPPPKSPHGKKPATGNKPSPPPHLTSSWPWVLFGSLTLTINAGYINSITLHNLHGIPSAHVTGIVARASNLFAEADWSRMSLYVVAYCCFVSGACMGGLLISHETFYLGRNYARALFLTAAIQGVALVIESHWDHSVYFIYACCLAMGLQNSLTSKYRGGARSGGR 321
MLKPVADAFLLLSSSQACRHSLHRRHVPFTAKLSRSDISAKDISAVISICLMPDRVPLVHRHRTPYHFHYEDEDEERRIPPSQGQEGSDPFEHTHIGSSSSSSHSDRPPSRGLSPPLTILRAKHPAAAALQHRPTTTVAHGHRSPSPTPKSAPPSLPPPKSPHGKKPATGNKPSPPPHLTSSWPWVLFGSLTLTINAGYINSITLHNLHGIPSAHVTGIVARASNLFAEADWSRMSLYVVAYCCFVSGACMGGLLISHETFYLGRNYARALFLTAAIQGVALVIESHWDHSVYFIYACCLAMGLQNSLTSKYRGGARSGGR
Sbjct: 1 MLKPVADAFLLLSSSQACRHSLHRRHVPFTAKLSRSDISAKDISAVISICLMPDRVPLVHRHRTPYHFHYEDEDEERRIPPSQGQEGSDPFEHTHIGSSSSSSHSDRPPSRGLSPPLTILRAKHPAAAALQHRPTTTVAHGHRSPSPTPKSAPPSLPPPKSPHGKKPATGNKPSPPPHLTSSWPWVLFGSLTLTINAGYINSITLHNLHGIPSAHVTGIVARASNLFAEADWSRMSLYVVAYCCFVSGACMGGLLISHETFYLGRNYARALFLTAAIQGVALVIESHWDHSVYFIYACCLAMGLQNSLTSKYRGGARSGGR 321
BLAST of EWM24177.1 vs. NCBI_GenBank
Match: gi|585105203|gb|EWM23918.1| (Protein of unknown function DUF1275 [Nannochloropsis gaditana]) HSP 1 Score: 145.591 bits (366), Expect = 6.152e-36 Identity = 77/189 (40.74%), Postives = 111/189 (58.73%), Query Frame = 0
Query: 134 PTTTVAHGHRSPSPTPKSAPPSLPPPKS----PHG--KKPATGNKPSPPPHLTSSWPWVLFGSLTLTINAGYINSITLHNLHGIPSAHVTGIVARASNLFAEADWSRMSLYVVAYCCFVSGACMGGLLISHETFYLGRNYARALFLTAAIQGVALVIESHWDHSVYFIYACCLAMGLQNSLTSKYRGGA 316
P+ V ++ P S +P P S P G ++ ++ P P+ + +L S LTINA +IN ITL+ + + SAHVTG+VARAS L A + Y + + FV+G+C G++++ ETFYLGRNY RALFL AA++G+AL+ E + S++FI+ C A GLQN LTSK+ G A
Sbjct: 48 PSPAVVQQKQTEPQNPPSNINDVPCPASKVNPPQGLQRQKSSYKNPGERPY----FKVILTASFVLTINAAFINIITLNTVQAMASAHVTGLVARASYLAATGRMDVLYQYALTWASFVAGSCTSGVIVAQETFYLGRNYGRALFLIAAVEGIALLTEDSYPDSIFFIWLCAYACGLQNGLTSKFSGNA 232
BLAST of EWM24177.1 vs. NCBI_GenBank
Match: gi|585106149|gb|EWM24629.1| (hypothetical protein Naga_100117g18 [Nannochloropsis gaditana]) HSP 1 Score: 135.576 bits (340), Expect = 2.958e-32 Identity = 66/135 (48.89%), Postives = 87/135 (64.44%), Query Frame = 0
Query: 186 VLFGSLTLTINAGYINSITLHNLHGIPSAHVTGIVARASNLFAEADWSRMSLYVVAYCCFVSGACMGGLLISHETFYLGRNYARALFLTAAIQGVALVI------ESHWDHSVYFIYACCLAMGLQNSLTSKYRG 314
+LFGS L NA ++N +T + + +AHVTG+VARAS A+ W + L + + CF+ G+ +GG +SHETFYLGR+Y RAL A +QG ALV+ E H H Y+IY C +AMGLQNSLTSKY G
Sbjct: 65 LLFGSFCLCFNASFVNLVTFSSYLKLATAHVTGLVARASQTIADGAWQLVYLPISVFLCFLVGSVVGGYTVSHETFYLGRSYGRALLTIALLQGSALVVNKVHVDEGHVQH--YYIYVCAVAMGLQNSLTSKYSG 197
BLAST of EWM24177.1 vs. NCBI_GenBank
Match: gi|750445452|ref|WP_040727327.1| (DUF1275 family protein [Thiomicrospira sp. Kp2]) HSP 1 Score: 78.1814 bits (191), Expect = 3.290e-13 Identity = 45/125 (36.00%), Postives = 68/125 (54.40%), Query Frame = 0
Query: 190 SLTLTINAGYINSITLHNLHGIPSAHVTGIVARASNLFAEADWSRMSLYVVAYCCFVSGACMGGLLISHETFYLGRNYARALFLTAAIQGVALVIESHWDHSVYFIYACCLAMGLQNSLTSKYRG 314
S T+T+ AGYINS L GIP + +TG+ +R S+ + DW ++ ++ C F SGA + GLLI + NY AL + +A+ +A + + S I +A GLQN+L + YRG
Sbjct: 26 SFTMTLIAGYINSAILIEF-GIPVSQMTGVSSRISDALIDIDWIELTKNLMILCGFFSGAVLSGLLIGQSKYKTTPNYGYALLINSALLTIATIFS--FIQSEISILLAAIACGLQNALVASYRG 147
BLAST of EWM24177.1 vs. NCBI_GenBank
Match: gi|1032799949|dbj|BAV11731.1| (membrane protein [Moraxella osloensis]) HSP 1 Score: 70.4774 bits (171), Expect = 1.159e-10 Identity = 42/134 (31.34%), Postives = 70/134 (52.24%), Query Frame = 0
Query: 184 PWVLFGSLTLTINAGYINSITLHNLHGIPSAHVTGIVARASNLFAEADWSRMSLYVVAYCCFVSGACMGGLLISHETFYLGRNYARALFLTAAIQGVALVI---ESHWDHSVYFIYACCLAMGLQNSLTSKYRG 314
W+L+G L NAG INS L + ++HVTG V + AE + +M++ + F+SGA + G ++ G+ Y +AL + A++ ++L++ +S W V+ AC GLQNS+ + Y G
Sbjct: 7 KWILWGGCVLAFNAGCINSTALVGFTHLSASHVTGNVTLFATALAEQHYQQMAMVCIVLLSFLSGAVISGFVVGSTALKEGKRYGKALLIEASLLIISLILFSYQSFWGQ-VFAAMAC----GLQNSMVATYSG 135
BLAST of EWM24177.1 vs. NCBI_GenBank
Match: gi|1042197537|ref|WP_065252707.1| (DUF1275 family protein [Moraxella osloensis] >gi|1041969207|gb|OBX58312.1| hypothetical protein A9Z61_02905 [Moraxella osloensis]) HSP 1 Score: 70.4774 bits (171), Expect = 1.329e-10 Identity = 42/134 (31.34%), Postives = 70/134 (52.24%), Query Frame = 0
Query: 184 PWVLFGSLTLTINAGYINSITLHNLHGIPSAHVTGIVARASNLFAEADWSRMSLYVVAYCCFVSGACMGGLLISHETFYLGRNYARALFLTAAIQGVALVI---ESHWDHSVYFIYACCLAMGLQNSLTSKYRG 314
W+L+G L NAG INS L + ++HVTG V + AE + +M++ + F+SGA + G ++ G+ Y +AL + A++ ++L++ +S W V+ AC GLQNS+ + Y G
Sbjct: 7 KWILWGGCVLAFNAGCINSTALVGFTHLSASHVTGNVTLFATALAEQHYQQMAMVCIVLLSFLSGAVISGFVVGSTALKEGKRYGKALLIEASLLIISLILFSYQSFWGQ-VFAAMAC----GLQNSMVATYSG 135
BLAST of EWM24177.1 vs. NCBI_GenBank
Match: gi|257448752|gb|EEV23717.1| (hypothetical protein ENHAE0001_1911 [Enhydrobacter aerosaccus SK60]) HSP 1 Score: 70.4774 bits (171), Expect = 1.410e-10 Identity = 42/134 (31.34%), Postives = 69/134 (51.49%), Query Frame = 0
Query: 184 PWVLFGSLTLTINAGYINSITLHNLHGIPSAHVTGIVARASNLFAEADWSRMSLYVVAYCCFVSGACMGGLLISHETFYLGRNYARALFLTAAIQGVALVI---ESHWDHSVYFIYACCLAMGLQNSLTSKYRG 314
W+L+G L NAG INS L + ++HVTG V + AE + +M++ + F+SGA + G ++ G+ Y AL + A++ ++L++ +S W V+ AC GLQNS+ + Y G
Sbjct: 7 KWILWGGCVLAFNAGCINSTALVGFTHLSASHVTGNVTLFATALAEQHYQQMAMVCIVLLSFLSGAVISGFVVGSTALKEGKRYGNALLIEASLLSISLILFSYQSFWGQ-VFAAMAC----GLQNSMVATYSG 135
BLAST of EWM24177.1 vs. NCBI_GenBank
Match: gi|907660453|gb|KND21641.1| (membrane protein [Enhydrobacter aerosaccus]) HSP 1 Score: 70.4774 bits (171), Expect = 1.480e-10 Identity = 42/134 (31.34%), Postives = 70/134 (52.24%), Query Frame = 0
Query: 184 PWVLFGSLTLTINAGYINSITLHNLHGIPSAHVTGIVARASNLFAEADWSRMSLYVVAYCCFVSGACMGGLLISHETFYLGRNYARALFLTAAIQGVALVI---ESHWDHSVYFIYACCLAMGLQNSLTSKYRG 314
W+L+G L NAG INS L + ++HVTG V + AE + +M++ + F+SGA + G ++ G+ Y +AL + A++ ++L++ +S W V+ AC GLQNS+ + Y G
Sbjct: 7 KWILWGGCVLAFNAGCINSTALVGFTHLSASHVTGNVTLFATALAEQHYQQMAMVCIVLLSFLSGAVISGFVVGSTALKEGKRYGKALLIEASLLIISLILFSYQSFWGQ-VFAAMAC----GLQNSMVATYSG 135
BLAST of EWM24177.1 vs. NCBI_GenBank
Match: gi|1140928390|ref|WP_076776631.1| (DUF1275 domain-containing protein [Enhydrobacter sp. H5] >gi|1139541867|gb|ONG37655.1| hypothetical protein BKE17_10345 [Enhydrobacter sp. H5]) HSP 1 Score: 70.0922 bits (170), Expect = 2.043e-10 Identity = 43/134 (32.09%), Postives = 69/134 (51.49%), Query Frame = 0
Query: 184 PWVLFGSLTLTINAGYINSITLHNLHGIPSAHVTGIVARASNLFAEADWSRMSLYVVAYCCFVSGACMGGLLISHETFYLGRNYARALFLTAAIQGVALVI---ESHWDHSVYFIYACCLAMGLQNSLTSKYRG 314
W+L+G L NAG INS L + ++HVTG V + AE + +M++ + F+SGA + G ++ G+ Y AL + A++ V+L++ +S W V+ AC GLQNS+ + Y G
Sbjct: 7 KWILWGGCVLAFNAGCINSTALVGFTHLSASHVTGNVTLFATALAEQHYQQMAMVCIVLLSFLSGAVISGFVVGSTALKEGKRYGNALLIEASLLIVSLILFSYQSFWGQ-VFAAMAC----GLQNSMVATYSG 135
BLAST of EWM24177.1 vs. NCBI_GenBank
Match: gi|1056604639|ref|WP_068035525.1| (DUF1275 family protein [Psychrobacter sp. P11G5] >gi|1002777304|gb|AMN67372.1| hypothetical protein AK825_06315 [Psychrobacter sp. P11G5]) HSP 1 Score: 70.0922 bits (170), Expect = 2.121e-10 Identity = 46/134 (34.33%), Postives = 71/134 (52.99%), Query Frame = 0
Query: 185 WVLFGSLTLTINAGYINSITLHNLHGIPSAHVTGIVARASNLFAEADWSRMSLYVVAYCC-FVSGACMGGLLISHETFYLGRNYARALFLTAAIQGVALVIESHW---DHSVYFIYACCLAMGLQNSLTSKYRG 314
W+L+G L +AG +N+ L G+ +HVTG V+ + A D +R LY+ A F++GA + G +I + LGR Y RAL++ A AL++ S+W H A +A GLQN++ + Y G
Sbjct: 8 WILWGGAVLAFSAGCVNTSALMGFAGLSVSHVTGNVSLFAAAIAYLD-ARSILYIGALLLSFLAGAILSGFVIGQTSLKLGRRYGRALYIEA-----ALLLLSYWLYQQHDYLGQLAAAMACGLQNAMVATYSG 135 The following BLAST results are available for this feature:
BLAST of EWM24177.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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