EWM24179.1, cds6494 (CDS) Nannochloropsis gaditana

Overview
NameEWM24179.1
Unique Namecds6494
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:682218..683423 -

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Properties
Property NameValue
Protein idEWM24179.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100552g5.9950.mrna
GbkeyCDS
End range.
End range683423
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:682218..683423 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24179.1 vs. NCBI_GenBank
Match: gi|585105560|gb|EWM24179.1| (hypothetical protein Naga_100552g5, partial [Nannochloropsis gaditana])

HSP 1 Score: 786.563 bits (2030), Expect = 0.000e+0
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 0 
Query:    1 SLPRFLPPSLQSTGRWTGIRASSETLSHALPPSLPPSLPPSGAGARGPPRERVSNDHLCPDPHSLPCLPRALVPALDPGISQGHPPPQAPGGALASTQHPSVSTSTALGEEHAHQPLPPRFRQEWCVAPPSLPAPLFPRPRILVSCPFLSFPLSFFAFLFPFFPTLCGFLPSSSPVVISAAGDYCTCPNPPPHLYPSFMVLSHLPSCLFFLHPSLSPSIPPSLPPSFPPGQSTSGWRTSPREGGRDGAREGGFVRQISFGPANKGRPAGIELLDLSGRGRDGERGREKDMGNTQVSSPVSAPDLEIVVSREGQDRGVKEGGEEEGLGTEEDDNELELAPEDRGEYDLGGYADGDVAKEVQMEEEEVEAALLRHGETGQAGEEGEEEEDGGDEVEEEEEGKR 401
            SLPRFLPPSLQSTGRWTGIRASSETLSHALPPSLPPSLPPSGAGARGPPRERVSNDHLCPDPHSLPCLPRALVPALDPGISQGHPPPQAPGGALASTQHPSVSTSTALGEEHAHQPLPPRFRQEWCVAPPSLPAPLFPRPRILVSCPFLSFPLSFFAFLFPFFPTLCGFLPSSSPVVISAAGDYCTCPNPPPHLYPSFMVLSHLPSCLFFLHPSLSPSIPPSLPPSFPPGQSTSGWRTSPREGGRDGAREGGFVRQISFGPANKGRPAGIELLDLSGRGRDGERGREKDMGNTQVSSPVSAPDLEIVVSREGQDRGVKEGGEEEGLGTEEDDNELELAPEDRGEYDLGGYADGDVAKEVQMEEEEVEAALLRHGETGQAGEEGEEEEDGGDEVEEEEEGKR
Sbjct:    1 SLPRFLPPSLQSTGRWTGIRASSETLSHALPPSLPPSLPPSGAGARGPPRERVSNDHLCPDPHSLPCLPRALVPALDPGISQGHPPPQAPGGALASTQHPSVSTSTALGEEHAHQPLPPRFRQEWCVAPPSLPAPLFPRPRILVSCPFLSFPLSFFAFLFPFFPTLCGFLPSSSPVVISAAGDYCTCPNPPPHLYPSFMVLSHLPSCLFFLHPSLSPSIPPSLPPSFPPGQSTSGWRTSPREGGRDGAREGGFVRQISFGPANKGRPAGIELLDLSGRGRDGERGREKDMGNTQVSSPVSAPDLEIVVSREGQDRGVKEGGEEEGLGTEEDDNELELAPEDRGEYDLGGYADGDVAKEVQMEEEEVEAALLRHGETGQAGEEGEEEEDGGDEVEEEEEGKR 401
The following BLAST results are available for this feature:
BLAST of EWM24179.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105560|gb|EWM24179.1|0.000e+0100.00hypothetical protein Naga_100552g5, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6510rna6510Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications