EWM24189.1, cds6484 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24189.1 vs. NCBI_GenBank
Match: gi|585105575|gb|EWM24189.1| (septum site-determining protein [Nannochloropsis gaditana]) HSP 1 Score: 973.385 bits (2515), Expect = 0.000e+0 Identity = 495/495 (100.00%), Postives = 495/495 (100.00%), Query Frame = 0 Query: 1 MRARLLSTARVGCGLSFPFSQVNARAIRSQSSNVSAPSPPPAPSEDEKPQVHLRQYLDAWMGSTGTVSTPRHQNQESPAASRDAQQPFSPPHAPPIAMTVAGKSYLVPTLRLPRGLSPSELKAGLRATTSLSAGYFQSAPMVVDLGEWLISQPLPRGGVRTASAGVGGEVLDGTLLATFVAAMKEAGLHPVGIANATATDVRAAALELGLPCFMARHAPPSPSTPAPALASVKASAPVPPQRRTEKEGTRASASRPAPTTPPSPPPSPPPSSSTRPPPSTSTVRASPTASPPLSPPPSSLPAMVVQGSVRTGQQVVAEGTSLVVLGHVHSGAEVSADGDIHIYGKLTGRALAGLSGDVRANIFVGRFNAELVAIGEVFTTCDVGEGGGRGRREGCRAWSGGLRVSLWRKRRASSCFVPSRYSSLPSPLQEDGGQGGREGGREGVPDFPPVLGSLTGAKNGFGSLRSLMGVDLWKMRSGGGRSSMAGRRGTGVPKA 495 MRARLLSTARVGCGLSFPFSQVNARAIRSQSSNVSAPSPPPAPSEDEKPQVHLRQYLDAWMGSTGTVSTPRHQNQESPAASRDAQQPFSPPHAPPIAMTVAGKSYLVPTLRLPRGLSPSELKAGLRATTSLSAGYFQSAPMVVDLGEWLISQPLPRGGVRTASAGVGGEVLDGTLLATFVAAMKEAGLHPVGIANATATDVRAAALELGLPCFMARHAPPSPSTPAPALASVKASAPVPPQRRTEKEGTRASASRPAPTTPPSPPPSPPPSSSTRPPPSTSTVRASPTASPPLSPPPSSLPAMVVQGSVRTGQQVVAEGTSLVVLGHVHSGAEVSADGDIHIYGKLTGRALAGLSGDVRANIFVGRFNAELVAIGEVFTTCDVGEGGGRGRREGCRAWSGGLRVSLWRKRRASSCFVPSRYSSLPSPLQEDGGQGGREGGREGVPDFPPVLGSLTGAKNGFGSLRSLMGVDLWKMRSGGGRSSMAGRRGTGVPKA Sbjct: 1 MRARLLSTARVGCGLSFPFSQVNARAIRSQSSNVSAPSPPPAPSEDEKPQVHLRQYLDAWMGSTGTVSTPRHQNQESPAASRDAQQPFSPPHAPPIAMTVAGKSYLVPTLRLPRGLSPSELKAGLRATTSLSAGYFQSAPMVVDLGEWLISQPLPRGGVRTASAGVGGEVLDGTLLATFVAAMKEAGLHPVGIANATATDVRAAALELGLPCFMARHAPPSPSTPAPALASVKASAPVPPQRRTEKEGTRASASRPAPTTPPSPPPSPPPSSSTRPPPSTSTVRASPTASPPLSPPPSSLPAMVVQGSVRTGQQVVAEGTSLVVLGHVHSGAEVSADGDIHIYGKLTGRALAGLSGDVRANIFVGRFNAELVAIGEVFTTCDVGEGGGRGRREGCRAWSGGLRVSLWRKRRASSCFVPSRYSSLPSPLQEDGGQGGREGGREGVPDFPPVLGSLTGAKNGFGSLRSLMGVDLWKMRSGGGRSSMAGRRGTGVPKA 495
BLAST of EWM24189.1 vs. NCBI_GenBank
Match: gi|1173931326|gb|OQR83782.1| (hypothetical protein ACHHYP_14282 [Achlya hypogyna]) HSP 1 Score: 136.346 bits (342), Expect = 1.203e-32 Identity = 99/300 (33.00%), Postives = 147/300 (49.00%), Query Frame = 0 Query: 98 MTVAGKSYLVPTLRLPRGLSPSELKAGLRATTSLS-AGYFQSAPMVVDLGEWLISQPLPRGGVRTASAGVGGEVLDGTLLATFVAAMKEAGLHPVGIANATATDVRAAALE-LGLPCFMARHAPPS----------PSTPAPALASVKASAPVPPQRRTEKEGTRASASRPAPTTPPSPPPSPPPSSSTRPPPSTSTVRASPTASPPLSPPPSSLPAMVVQGSVRTGQQVVAEGTSLVVLGHVHSGAEVSADGDIHIYGKLTGRALAGLSGDVRANIFVGRFNAELVAIGEVFTTCDVGE 385 + V G +YL+PTLRL GL+ ++ + +R S + P+V+DLG + S P AS L + + A++ LHP+GI NA+ D++A A + L +P + A+ +V+A+ + +R E P S SS+ P + PS + M+V+GSVRTGQQV A+ L+V+G V+SGAEV ADGDIH+YG L GRALAG+ G+VRA ++ +F+AEL++I + FTTCD E Sbjct: 26 IQVLGGAYLIPTLRL-NGLTRTDGEYDMRRLVEQSRMNWNLRGPVVLDLGS-VSSNGSPHNTPIRASE-----------LRSLIYALRGENLHPIGITNASE-DIKAMAWKNLQVPSIIGTRMDDEGEGEMTRVAMNQLMEDAIGNVEAAQAIIDERLDE------------------APQSVSESSTV-----------------PATKEPSVMSMMLVEGSVRTGQQVYAKEQGLIVMGSVNSGAEVLADGDIHVYGTLKGRALAGIGGNVRAKVYAHKFDAELISIADTFTTCDALE 276
BLAST of EWM24189.1 vs. NCBI_GenBank
Match: gi|298711693|emb|CBJ32744.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 132.88 bits (333), Expect = 2.197e-31 Identity = 96/230 (41.74%), Postives = 118/230 (51.30%), Query Frame = 0 Query: 182 AMKEAGLHPVGIANATATDVRAAALELGLPCFMARHAPPSPSTPAPALA----SVKASAPVPPQRRTEKEGTRASASRPAPTTPPSPPPSPPPSSSTRPPPSTSTVRASPTASPPLSPPPSSL-------------------------PAMVVQGSVRTGQQVVAEGTSLVVLGHVHSGAEVSADGDIHIYGKLTGRALAGLSGDVRANIFVGRFNAELVAIGEVFTTCD 382 A++ AGL PVG+ NA+ DV A E GLP M HA P S P A + + A PVP + E S + P+ PS +P P+ ++ R + + P P++ MV QGSVR+GQQV AEGTSLVVLG V SG EV ADGDIH+YG L GRALAGLSG+ A IF RF+AELV +GE FTT D Sbjct: 53 AVRAAGLVPVGVCNAS-HDVLKTASEQGLPEVMMVHARPRSSPPQVAASRSTRNHGAEQPVPVRASDAAE----SVVKTPPSAAPSGTSAPAPTRTSALGEGEEGRRRGGGSCSVVEPAPATTGEQEEDRNSHSERSGSSLSEEESGRETMVYQGSVRSGQQVFAEGTSLVVLGAVSSGGEVMADGDIHVYGTLRGRALAGLSGNKSAKIFATRFDAELVGVGETFTTLD 277
BLAST of EWM24189.1 vs. NCBI_GenBank
Match: gi|669141120|ref|XP_008606122.1| (septum site-determining protein MinC [Saprolegnia diclina VS20] >gi|530742181|gb|EQC40423.1| septum site-determining protein MinC [Saprolegnia diclina VS20]) HSP 1 Score: 128.257 bits (321), Expect = 1.086e-29 Identity = 96/290 (33.10%), Postives = 140/290 (48.28%), Query Frame = 0 Query: 98 MTVAGKSYLVPTLRLPRGLSPSELKAGLRATTSLSAGYFQSAPMVVDLGEWLISQPLPRGG-VRTASAGVGGEVLDGTLLATFVAAMKEAGLHPVGIANATATDVRAAALE-LGLPCFMARHAPPSPSTPAPALASVKASAPVPPQRRTEKEGTRASASRPAPTTPPSPPPSPPPSSSTRPPPSTSTVRASPTASPPLSPPPSSLPAMVVQGSVRTGQQVVAEGTSLVVLGHVHSGAEVSADGDIHIYGKLTGRALAGLSGDVRANIFVGRFNAELVAIGEVFTTCDVGE 385 + V G +YL+PTLRL + + R + P+++DL + S P +R++ L + + A++ LHP+GI NA+ D++A A + L +P ++ A + A + + +E +A T PS P P ++ ST R MVV+GSVRTGQQV A+ LVVLG V+SGAEV ADGDIHIYG L GRALAG+ G+ A ++V +F+AEL++I + FTTCD E Sbjct: 26 IHVLGGAYLIPTLRLHAPVRVNGEYDMRRLVEQSRTNWNLRGPVILDLAN-VSSNGSPHNSPIRSSE------------LRSLIYALRSENLHPIGITNAS-EDIKAMAWKSLQVPSIISTRLEDDGDYEASDAMNRVAMHQLMEEAMGHEEAAQAIIGERLDT--PSAPAETPVVAAI-----ASTQRG----------------MMVVEGSVRTGQQVYAKDQGLVVLGSVNSGAEVLADGDIHIYGTLKGRALAGIGGNTDAKVYVQKFDAELISIADTFTTCDALE 278
BLAST of EWM24189.1 vs. NCBI_GenBank
Match: gi|698780685|ref|XP_009823386.1| (septum site-determining protein MinC [Aphanomyces astaci] >gi|574121110|gb|ETV86587.1| septum site-determining protein MinC [Aphanomyces astaci]) HSP 1 Score: 126.716 bits (317), Expect = 3.238e-29 Identity = 98/293 (33.45%), Postives = 143/293 (48.81%), Query Frame = 0 Query: 98 MTVAGKSYLVPTLRL---PRGLSPSELKAGLRATTSLSAGYFQSAPMVVDLGEWLISQPLPRGGVRTASAGVGGEVLDGTLLATFVAAMKEAGLHPVGIANATATDVRAAALE-LGLPCFMARHAPPSPSTPAPALASVKASAPVPPQRRTEKEGTRASASRPAPT-TPPSPPPSPPPSSSTRPPPSTSTVRASPTASPPLSPPPSSLPAMVVQGSVRTGQQVVAEGTSLVVLGHVHSGAEVSADGDIHIYGKLTGRALAGLSGDVRANIFVGRFNAELVAIGEVFTTCDVGE 385 + V G +YLVPTLRL R ++KA + A S + P+V+DL + G T+ + T ++K+A L P+ I NA+ DV+A A L +P M + +V + + ++ A+ + A + PS P +++T P + S + MVV+GSVRTGQQ+ A+G LVV+G V+SGAEV ADGDIHIYG L GRALAG+ G+ A ++ RF+AEL++I + FTTCD E Sbjct: 25 LQVLGGAYLVPTLRLNSPTRVNGEYDMKAIVAAAKS---NWTLRGPVVIDL-----ANVSSNGSPHTSP-------IKPTEFKALFRSLKDANLVPIAITNASE-DVKAMAWRTLQVPSIMGTRLSDDDNIDGERWIAVSTVS------QGDETAEYAAVTEEAYSKVIPSADQDLPHNATTTPTHALSGM-------------------MVVEGSVRTGQQIYAKGQGLVVMGSVNSGAEVLADGDIHIYGMLKGRALAGIGGNSHAKVYAQRFDAELISIADTFTTCDALE 276
BLAST of EWM24189.1 vs. NCBI_GenBank
Match: gi|698780689|ref|XP_009823388.1| (septum site-determining protein MinC, variant 1 [Aphanomyces astaci] >gi|574121111|gb|ETV86588.1| septum site-determining protein MinC, variant 1 [Aphanomyces astaci]) HSP 1 Score: 126.716 bits (317), Expect = 3.312e-29 Identity = 98/293 (33.45%), Postives = 143/293 (48.81%), Query Frame = 0 Query: 98 MTVAGKSYLVPTLRL---PRGLSPSELKAGLRATTSLSAGYFQSAPMVVDLGEWLISQPLPRGGVRTASAGVGGEVLDGTLLATFVAAMKEAGLHPVGIANATATDVRAAALE-LGLPCFMARHAPPSPSTPAPALASVKASAPVPPQRRTEKEGTRASASRPAPT-TPPSPPPSPPPSSSTRPPPSTSTVRASPTASPPLSPPPSSLPAMVVQGSVRTGQQVVAEGTSLVVLGHVHSGAEVSADGDIHIYGKLTGRALAGLSGDVRANIFVGRFNAELVAIGEVFTTCDVGE 385 + V G +YLVPTLRL R ++KA + A S + P+V+DL + G T+ + T ++K+A L P+ I NA+ DV+A A L +P M + +V + + ++ A+ + A + PS P +++T P + S + MVV+GSVRTGQQ+ A+G LVV+G V+SGAEV ADGDIHIYG L GRALAG+ G+ A ++ RF+AEL++I + FTTCD E Sbjct: 25 LQVLGGAYLVPTLRLNSPTRVNGEYDMKAIVAAAKS---NWTLRGPVVIDL-----ANVSSNGSPHTSP-------IKPTEFKALFRSLKDANLVPIAITNASE-DVKAMAWRTLQVPSIMGTRLSDDDNIDGERWIAVSTVS------QGDETAEYAAVTEEAYSKVIPSADQDLPHNATTTPTHALSGM-------------------MVVEGSVRTGQQIYAKGQGLVVMGSVNSGAEVLADGDIHIYGMLKGRALAGIGGNSHAKVYAQRFDAELISIADTFTTCDALE 276
BLAST of EWM24189.1 vs. NCBI_GenBank
Match: gi|1173947034|gb|OQR95463.1| (hypothetical protein THRCLA_07850 [Thraustotheca clavata]) HSP 1 Score: 125.176 bits (313), Expect = 1.021e-28 Identity = 93/289 (32.18%), Postives = 139/289 (48.10%), Query Frame = 0 Query: 98 MTVAGKSYLVPTLRLPRGLSPSELKAGLRATTSLSAGYFQSAPMVVDLGEWLISQPLPRGG-VRTASAGVGGEVLDGTLLATFVAAMKEAGLHPVGIANATATDVRAAALELGLPCFMARHAPPSPSTPAPALASVKASAPVPPQRRTEKEGTRASASRPAPTTPPSPPPSPPPSSSTRPPPSTSTVRASPTASPPLSPPPSSLP---AMVVQGSVRTGQQVVAEGTSLVVLGHVHSGAEVSADGDIHIYGKLTGRALAGLSGDVRANIFVGRFNAELVAIGEVFTTCD 382 + V G +YLVPTLRL + R + P+++DL E + S P +R++ L + + A+K L+P+GI NA+ DV+ A S P+L + + +++ E TR + ++ S R P+T+ +P ++LP M+V+GSVRTGQQV A+ L+V+G VHSGAEV ADGDIH+YG L GRALAG+ G+ A +F +F+AEL++I + FTTCD Sbjct: 11 LQVLGGAYLVPTLRLNAPVRVDGQYDMHRLVQDSHTSWNLRGPVILDL-ENVSSNGSPHNSPIRSSE------------LRSLLHALKGIHLYPIGITNASQ-DVKTMAWN---------------SHQLPSLIGTRMD-----EEQSDGELTRMAMNQLLE-EAIEKEDSTANIIEERIEPATTNAE-----TPLKDEKTNTLPNAGMMLVEGSVRTGQQVYAKDQGLIVMGSVHSGAEVLADGDIHVYGTLKGRALAGIGGNNNAKVFAQKFDAELISIADTFTTCD 259
BLAST of EWM24189.1 vs. NCBI_GenBank
Match: gi|813141441|ref|XP_012198959.1| (hypothetical protein SPRG_05060 [Saprolegnia parasitica CBS 223.65] >gi|641536460|gb|KDO30349.1| hypothetical protein SPRG_05060 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 123.25 bits (308), Expect = 6.622e-28 Identity = 93/290 (32.07%), Postives = 138/290 (47.59%), Query Frame = 0 Query: 98 MTVAGKSYLVPTLRLPRGLSPSELKAGLRATTSLSAGYFQSAPMVVDLGEWLISQPLPRGG-VRTASAGVGGEVLDGTLLATFVAAMKEAGLHPVGIANATATDVRAAALE-LGLPCFMARHAPPSPSTPAPALASVKASAPVPPQRRTEKEGTRASASRPAPTTPPSPPPSPPPSSSTRPPPSTSTVRASPTASPPLSPPPSSLPAMVVQGSVRTGQQVVAEGTSLVVLGHVHSGAEVSADGDIHIYGKLTGRALAGLSGDVRANIFVGRFNAELVAIGEVFTTCDVGE 385 + V G +YL+PTLRL + + R + P+++DL + S P +R++ L + + A++ LHP+GI NA+ D++A A + L +P ++ A + A + + +E +A S T S A+ + P+ MVV+GSVRTGQQV A+ LVVLG V+SGAEV ADGDIHIYG L GRALAG+ G+ A ++V +F+AEL++I + FTTCD E Sbjct: 26 IHVLGGAYLIPTLRLHAPVRVNGEYDMRRLVEQSRVNWNLRGPVILDLAN-VSSNGSPHNSPIRSSE------------LRSLIYALRSENLHPIGITNAS-EDIKAMAWKSLQVPSIISTRLEDDGDYEASDAMNRVAMHQLMEEAMGHEEAAQAIISERLDT--------------------------SSAAAEAPAAAPAQRGMMVVEGSVRTGQQVYAKDQGLVVLGSVNSGAEVLADGDIHIYGTLKGRALAGIGGNTDAKVYVQKFDAELISIADTFTTCDALE 275
BLAST of EWM24189.1 vs. NCBI_GenBank
Match: gi|673024668|ref|XP_008866295.1| (septum site-determining protein MinC, variant [Aphanomyces invadans] >gi|574477862|gb|ETW04858.1| septum site-determining protein MinC, variant [Aphanomyces invadans]) HSP 1 Score: 121.324 bits (303), Expect = 1.788e-27 Identity = 96/288 (33.33%), Postives = 140/288 (48.61%), Query Frame = 0 Query: 100 VAGKSYLVPTLRL---PRGLSPSELKAGLRATTSLSAGYFQSAPMVVDLGEWLISQPLPRGG-VRTASAGVGGEVLDGTLLATFVAAMKEAGLHPVGIANATATDVRAAALE-LGLPCFMARHAPPSPSTPAPALASVKASAPVPPQRRTEKEGTRASASRPAPTTPPSPPPSPPPSSSTRPPPSTSTVRASPTASPPLSPPPSSLPAMVVQGSVRTGQQVVAEGTSLVVLGHVHSGAEVSADGDIHIYGKLTGRALAGLSGDVRANIFVGRFNAELVAIGEVFTTCD 382 V G +YL+PTLRL R +++A + A A + P+VVDL + S P +R A L +++K+A L P+ I NA+ DV+ A L +P M ++ + S P ++ E A+ + + P +S+T P + SP + MVV+GSVRTGQQ+ A+G LVV+G V+SGAEV ADGDIH+YG L GRALAG+ G A ++ +F+AEL++I + FTTCD Sbjct: 22 VLGGAYLIPTLRLVPPTRVNGEYDMEATVAAA---KANWSLRGPVVVDLAN-VSSNGSPHMSPIRPAE------------LKALFSSLKDANLVPIAITNAS-EDVKTIAWRTLQVPSIMGTRMGDEDTS-----SDRWQSVPAFDDTTSKDEAEYAAVTEE---SYAKDPLVEHETSNTEPLTT--------------SPTHGTKGMMVVEGSVRTGQQIYAKGQGLVVMGSVNSGAEVLADGDIHVYGVLKGRALAGIGGYSHAKVYAQKFDAELISIADTFTTCD 270
BLAST of EWM24189.1 vs. NCBI_GenBank
Match: gi|673024670|ref|XP_008866296.1| (septum site-determining protein MinC [Aphanomyces invadans] >gi|574477861|gb|ETW04857.1| septum site-determining protein MinC [Aphanomyces invadans]) HSP 1 Score: 121.324 bits (303), Expect = 2.835e-27 Identity = 96/288 (33.33%), Postives = 140/288 (48.61%), Query Frame = 0 Query: 100 VAGKSYLVPTLRL---PRGLSPSELKAGLRATTSLSAGYFQSAPMVVDLGEWLISQPLPRGG-VRTASAGVGGEVLDGTLLATFVAAMKEAGLHPVGIANATATDVRAAALE-LGLPCFMARHAPPSPSTPAPALASVKASAPVPPQRRTEKEGTRASASRPAPTTPPSPPPSPPPSSSTRPPPSTSTVRASPTASPPLSPPPSSLPAMVVQGSVRTGQQVVAEGTSLVVLGHVHSGAEVSADGDIHIYGKLTGRALAGLSGDVRANIFVGRFNAELVAIGEVFTTCD 382 V G +YL+PTLRL R +++A + A A + P+VVDL + S P +R A L +++K+A L P+ I NA+ DV+ A L +P M ++ + S P ++ E A+ + + P +S+T P + SP + MVV+GSVRTGQQ+ A+G LVV+G V+SGAEV ADGDIH+YG L GRALAG+ G A ++ +F+AEL++I + FTTCD Sbjct: 22 VLGGAYLIPTLRLVPPTRVNGEYDMEATVAAA---KANWSLRGPVVVDLAN-VSSNGSPHMSPIRPAE------------LKALFSSLKDANLVPIAITNAS-EDVKTIAWRTLQVPSIMGTRMGDEDTS-----SDRWQSVPAFDDTTSKDEAEYAAVTEE---SYAKDPLVEHETSNTEPLTT--------------SPTHGTKGMMVVEGSVRTGQQIYAKGQGLVVMGSVNSGAEVLADGDIHVYGVLKGRALAGIGGYSHAKVYAQKFDAELISIADTFTTCD 270 The following BLAST results are available for this feature:
BLAST of EWM24189.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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