EWM24191.1, cds6482 (CDS) Nannochloropsis gaditana

Overview
NameEWM24191.1
Unique Namecds6482
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:647889..649622 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24191.1
Productmitochondrial rna splicing protein
Orig transcript idgnl|cribi|Naga_100325g4.3133.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:647889..649622 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0015095magnesium ion transmembrane transporter activity
GO:0046873metal ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0015693magnesium ion transport
GO:0055085transmembrane transport
GO:0030001metal ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR026573MRS2/LPE10
IPR002523MgTranspt_CorA/ZnTranspt_ZntB
Homology
BLAST of EWM24191.1 vs. NCBI_GenBank
Match: gi|585105577|gb|EWM24191.1| (mitochondrial rna splicing protein [Nannochloropsis gaditana])

HSP 1 Score: 1178.31 bits (3047), Expect = 0.000e+0
Identity = 577/577 (100.00%), Postives = 577/577 (100.00%), Query Frame = 0
Query:    1 MRRILQEGRRHTRGTFNISSHSQPFHALRLPPTFSRPPLLPASLGLRFIRIGRKGEDGPHFSTQKDETKRAPQRTSLSPYEIVATKLGRFDRQLQALQVDAEGEVSTCTTSIKELLLDTQMHVRDLIALSPEALRKRGGRLTPCILPRKDVIVFVMHPLRLVISKNSCLAFDPGDPTVQSVIADISSAIKIQQLERAHLAKSGNGSVLEPYTISYELVVLEQALRSFCNQFSRIKELLGLIVETSLKALVDSQGSDQEEQLYRLVPLKDGLSVAQHNMQEAVGVLQQLVDCDEDMLAMLLTEKAALQKEKARVSSQAARLDLNLHSDVELLLENYLRELILTGQQIKMLQARVQSAQEVFSINVDLMRNRVLRITLLLTILSTSLASAATIGAFFGMNVRLPESLETHPEAFAWITVGSICLGAGLFALAVAFARGHGKDRVRRDLQSVAAFQSIFKHIRSVSQAIYQTSLDPKEVAMGKTKESRAYFRKMLSAHRNYEVSWEEVDVLMDVLGASADQFRQQQKYSDETSEATIYRKLFESLAAQERQETSGDEDLEAAGREARDRVAEARRERPPV 577
            MRRILQEGRRHTRGTFNISSHSQPFHALRLPPTFSRPPLLPASLGLRFIRIGRKGEDGPHFSTQKDETKRAPQRTSLSPYEIVATKLGRFDRQLQALQVDAEGEVSTCTTSIKELLLDTQMHVRDLIALSPEALRKRGGRLTPCILPRKDVIVFVMHPLRLVISKNSCLAFDPGDPTVQSVIADISSAIKIQQLERAHLAKSGNGSVLEPYTISYELVVLEQALRSFCNQFSRIKELLGLIVETSLKALVDSQGSDQEEQLYRLVPLKDGLSVAQHNMQEAVGVLQQLVDCDEDMLAMLLTEKAALQKEKARVSSQAARLDLNLHSDVELLLENYLRELILTGQQIKMLQARVQSAQEVFSINVDLMRNRVLRITLLLTILSTSLASAATIGAFFGMNVRLPESLETHPEAFAWITVGSICLGAGLFALAVAFARGHGKDRVRRDLQSVAAFQSIFKHIRSVSQAIYQTSLDPKEVAMGKTKESRAYFRKMLSAHRNYEVSWEEVDVLMDVLGASADQFRQQQKYSDETSEATIYRKLFESLAAQERQETSGDEDLEAAGREARDRVAEARRERPPV
Sbjct:    1 MRRILQEGRRHTRGTFNISSHSQPFHALRLPPTFSRPPLLPASLGLRFIRIGRKGEDGPHFSTQKDETKRAPQRTSLSPYEIVATKLGRFDRQLQALQVDAEGEVSTCTTSIKELLLDTQMHVRDLIALSPEALRKRGGRLTPCILPRKDVIVFVMHPLRLVISKNSCLAFDPGDPTVQSVIADISSAIKIQQLERAHLAKSGNGSVLEPYTISYELVVLEQALRSFCNQFSRIKELLGLIVETSLKALVDSQGSDQEEQLYRLVPLKDGLSVAQHNMQEAVGVLQQLVDCDEDMLAMLLTEKAALQKEKARVSSQAARLDLNLHSDVELLLENYLRELILTGQQIKMLQARVQSAQEVFSINVDLMRNRVLRITLLLTILSTSLASAATIGAFFGMNVRLPESLETHPEAFAWITVGSICLGAGLFALAVAFARGHGKDRVRRDLQSVAAFQSIFKHIRSVSQAIYQTSLDPKEVAMGKTKESRAYFRKMLSAHRNYEVSWEEVDVLMDVLGASADQFRQQQKYSDETSEATIYRKLFESLAAQERQETSGDEDLEAAGREARDRVAEARRERPPV 577          
BLAST of EWM24191.1 vs. NCBI_GenBank
Match: gi|553193365|ref|XP_005855761.1| (magnesium ion transporter mrs2 [Nannochloropsis gaditana CCMP526] >gi|422293302|gb|EKU20602.1| magnesium ion transporter mrs2 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 604.749 bits (1558), Expect = 0.000e+0
Identity = 298/300 (99.33%), Postives = 298/300 (99.33%), Query Frame = 0
Query:  278 MQEAVGVLQQLVDCDEDMLAMLLTEKAALQKEKARVSSQAARLDLNLHSDVELLLENYLRELILTGQQIKMLQARVQSAQEVFSINVDLMRNRVLRITLLLTILSTSLASAATIGAFFGMNVRLPESLETHPEAFAWITVGSICLGAGLFALAVAFARGHGKDRVRRDLQSVAAFQSIFKHIRSVSQAIYQTSLDPKEVAMGKTKESRAYFRKMLSAHRNYEVSWEEVDVLMDVLGASADQFRQQQKYSDETSEATIYRKLFESLAAQERQETSGDEDLEAAGREARDRVAEARRERPPV 577
            MQEAVGVLQQLVDCDEDMLAMLLTEKAALQKEKARVSSQAARLDLNLHSDVELLLENYLRELILTGQQIKMLQARVQSAQEVFSINVDLMRNRVLRITLLLTILSTSLASAATIGAFFGMNVRLPESLETHPEAFAWITVGSICLGAGLFALAVAFARGHGKDRVRRDLQSVAAFQSIFKHIRSVSQAIYQTSLDPKEVAMGKTKESRAYFRKMLSAHRNYEVSWEEVDVLMDVLGASADQFRQQQKYSDETSEATIYRKLFESLAAQERQET GDED EAAGREARDRVAEARRERPPV
Sbjct:    1 MQEAVGVLQQLVDCDEDMLAMLLTEKAALQKEKARVSSQAARLDLNLHSDVELLLENYLRELILTGQQIKMLQARVQSAQEVFSINVDLMRNRVLRITLLLTILSTSLASAATIGAFFGMNVRLPESLETHPEAFAWITVGSICLGAGLFALAVAFARGHGKDRVRRDLQSVAAFQSIFKHIRSVSQAIYQTSLDPKEVAMGKTKESRAYFRKMLSAHRNYEVSWEEVDVLMDVLGASADQFRQQQKYSDETSEATIYRKLFESLAAQERQETPGDEDFEAAGREARDRVAEARRERPPV 300          
BLAST of EWM24191.1 vs. NCBI_GenBank
Match: gi|1210517381|dbj|GAX23638.1| (magnesium transporter [Fistulifera solaris])

HSP 1 Score: 135.576 bits (340), Expect = 3.494e-31
Identity = 118/402 (29.35%), Postives = 194/402 (48.26%), Query Frame = 0
Query:  124 RDLIALSPEALRKRGGRLTP-----CILPRKDVIVFVMHPLRLVISKNSCLAFDPGDPTVQSVIADISSAIKIQQLERAHLAKSGNGSVLEPYTISYELVVLEQALRSFCNQFSRIKELLGLIVETSLKALVDSQGSDQEEQLYRLVPLKDGLSVAQHNMQEAVGVLQQLVDCDEDMLAMLLTEKAALQKEKARVSSQAARLDLNLHSDVELLLENYLRELILTGQQIKMLQARVQSAQEVFSINVDLMRNRVLRITLLLTILSTSLASAATIGAFFGMNVRLPESLETHPEAFAWITVGSICLGAGLFAL-AVAFARGHG-KDRVRRDLQSVAAFQSIFKHIRSVSQAIYQTSLDPKEVAMGKTKESRAYFRKMLSAHR-NYEVSWEEVDVLMDVLGASAD 517
            RDL  L+  + ++R  ++ P      I+P++ V++     +R V+  +    FD   P VQS   ++           A   +SGN     P     ELV LEQ L S  + F+R   L   IV++ L  + +   SD    +++LVPLKD L   +  +++++  L  L++ D++ML +LLTE+     E+AR   Q   ++   H  VELLL  Y REL     +I     R+QS QE  ++++   RNR++R+ + + I   +     T+  FFGMN  L   LET P AF ++ + ++  G GL A+ A+ +  G   + R  + L+ +    +    + ++  +I  T      V        R  FRKML   R N EV+  EVD++ +V   + D
Sbjct:   15 RDLFTLNITSRQERRMKMRPERYVSAIVPKESVVLLSFGSIRAVVGLDHVFLFDAHKPMVQSFAREV-----------AAFFRSGNLHGEPP-----ELVFLEQVLNSTVDSFNRRLRLYEPIVDSFLDKVSNEIYSDT--GVHQLVPLKDSLQSFEIQVKQSIDCLTGLLNQDDEMLDLLLTEQ-----EEARF--QGLTVEHTRHEHVELLLGVYARELDNISAEISYALGRLQSKQEFVALSLAGYRNRMIRMNVHIGIAGLTFGFGTTVAGFFGMN--LMNGLETSPIAFDYVILSALG-GGGLIAVGALNYLSGSAMQKRASKRLEEIETLTNALSDLGAIDYSIKTTLRQGLSV-------DRQTFRKMLEKARPNREVTEAEVDLIFNVFDRAED 381          
BLAST of EWM24191.1 vs. NCBI_GenBank
Match: gi|1210526174|dbj|GAX15092.1| (magnesium transporter [Fistulifera solaris])

HSP 1 Score: 135.576 bits (340), Expect = 3.669e-31
Identity = 116/402 (28.86%), Postives = 195/402 (48.51%), Query Frame = 0
Query:  124 RDLIALSPEALRKRGGRLTP-----CILPRKDVIVFVMHPLRLVISKNSCLAFDPGDPTVQSVIADISSAIKIQQLERAHLAKSGNGSVLEPYTISYELVVLEQALRSFCNQFSRIKELLGLIVETSLKALVDSQGSDQEEQLYRLVPLKDGLSVAQHNMQEAVGVLQQLVDCDEDMLAMLLTEKAALQKEKARVSSQAARLDLNLHSDVELLLENYLRELILTGQQIKMLQARVQSAQEVFSINVDLMRNRVLRITLLLTILSTSLASAATIGAFFGMNVRLPESLETHPEAFAWITVGSICLGAGLFAL-AVAFARGHG-KDRVRRDLQSVAAFQSIFKHIRSVSQAIYQTSLDPKEVAMGKTKESRAYFRKMLSAHR-NYEVSWEEVDVLMDVLGASAD 517
            RDL  L+  + ++R  ++ P      I+P++ V++     +R V+  +    FD   P VQ+   ++++  +           SGN     P     ELV LEQ L S  + F+R   L   IV++ L  + +   SD    +++LVPLKD L   +  +++++  L  L++ D++ML +LLTE+     E+AR   Q   ++   H  VELLL  Y REL     +I     R+QS QE  ++++   RNR++R+ + + I   +     T+  FFGMN  L   LET P AF ++ + ++  G GL A+ A+ +  G   + R  + L+ +    +    + ++  +I  T      V        R  FRKML   R N EV+  EVD++ +V   + D
Sbjct:   15 RDLFTLNITSRQERRMKMRPERYVSAIVPKESVVLLSFGSIRAVVGLDHVFLFDAHKPMVQTFAREVAAVFR-----------SGNLHGDPP-----ELVFLEQVLNSTVDSFNRRLRLYEPIVDSFLDKVSNEIYSDT--GVHQLVPLKDSLQSFEIQVKQSIDCLTGLLNQDDEMLDLLLTEQ-----EEARF--QGLTVEHTRHEHVELLLGVYARELDNISAEISYALGRLQSKQEFVALSLAGYRNRMIRMNVHIGIAGLTFGFGTTVAGFFGMN--LMNGLETSPIAFDYVVLSAVG-GGGLIAVGALNYLSGSAMQKRASKRLEEIETLTNALSDLGAIDYSIKTTLRQGLSV-------DRQTFRKMLEKARPNREVTEAEVDLIFNVFDRAED 381          
BLAST of EWM24191.1 vs. NCBI_GenBank
Match: gi|857979066|emb|CEO95304.1| (hypothetical protein PBRA_004070 [Plasmodiophora brassicae])

HSP 1 Score: 136.732 bits (343), Expect = 3.879e-31
Identity = 117/434 (26.96%), Postives = 202/434 (46.54%), Query Frame = 0
Query:   92 RQLQALQVDAEGEVSTCTTSIKELLLDTQMHVRDLIALSPEALRKRGGRLTPCILPRKDVIVFVMHPLRLVISKNSCLAFDPGDPTVQSVIADISSAIKIQQLERAHLAKSGNGSVLEPYTISYELVVLEQALRSFCNQFSRIKELLGLIVETSLKALVDSQGSDQEEQLYRLVPLKDGLSVAQHNMQEAVGVLQQLVDCDEDMLAMLLTEKAALQKEKARVSSQAARLDLNLHSDVELLLENYLRELILTGQQIKMLQARVQSAQEVFSINVDLMRNRVLRITLLLTILSTSLASAATIGAFFGMNVRLPESLETHPEAFAWITVGSICLGAGLFALAVAFARGHGKDRVRRDLQSVAAFQSIFKHIRSVSQAIYQTSLDPKEVAMGKTKESRAYFRKMLSAHRNYEVSWEEVDVLMDVLGASADQFRQQQKY 525
            R+   L+  A+GE +    S+++LL  + ++ RDL+ L         G     ILPR D ++ V   ++ ++ ++  + FD      +S I   +++ K       +L  + +        +++EL  +E  L   C +  R   L G +++  L  L D    + E  L RL+ +K+ LS  + + QE    +  L++ DEDM  M LT ++ L        +    +D + H DVEL++E+YLR++    Q    L+  ++SAQE+ +IN+   RNR++++ L + + S SLA++A I + FGMN  LP   E  P AF  +    I +   ++A    +A   G  R  + +  V +  S+  +I  V Q +   + D   +        R  FR +L       V  EE  +L DV     D+    QKY
Sbjct:   62 REFDVLRFKADGEFTKEKVSVEDLLKVSGIYARDLLLLDTS-----HGNPHSVILPRGDSLL-VNFFVKAIVYRDRAIIFDAN----KSTIVAFANSFK------TYLTSASDKR------LAFELRAVEGILSLGCERHYRRLSLYGPVIQALLNQLTDQL--EGEAILRRLLAVKNSLSSFEVDSQEYKTTMTDLLNNDEDMANMNLTLRSQL--------APGETVDRSEHQDVELMIESYLRQMTEMYQHAYYLRKSIESAQEILNINLSSHRNRMIKMDLQMAMGSVSLAASAVIASTFGMN--LPSGFEASPTAFWAMATSIIVIAPIIYAACHRYA--EGSPRSSQYVMEVKSIDSLLANISEVEQVLVNHACDDVGI-------DREQFRALLQLETGRAVRAEEAQMLFDVFDVPQDEKITFQKY 452          
BLAST of EWM24191.1 vs. NCBI_GenBank
Match: gi|551662959|ref|XP_005834244.1| (hypothetical protein GUITHDRAFT_137462 [Guillardia theta CCMP2712] >gi|428178389|gb|EKX47264.1| hypothetical protein GUITHDRAFT_137462 [Guillardia theta CCMP2712])

HSP 1 Score: 120.939 bits (302), Expect = 2.625e-25
Identity = 122/447 (27.29%), Postives = 208/447 (46.53%), Query Frame = 0
Query:  110 TSIKELLLD--------TQMHVRDLIALSPEALRK-RGGRLTPCILPRKDVIVFVMHPLRLVISKNSCLAFDPGDPTVQSVIADISSAIKIQQLERAHLAKSGNGSVLEPYTISYELVVLEQALRSFC----NQFSRIKELLGLIVETSLKALVDSQGSD-QEEQLYRLVPLKDGLSVAQHNMQEAVGVLQQLVDCDEDMLAMLLTEKAALQKEKARVSSQAARLDLNLHSDVELLLENYLRELILTGQQIKMLQARVQSAQEVFSINVDLMRNRVLRITLLLTILSTSLASAATIGAFFGMNVRLPESLETHPEAFAWITVGSICLGA-GLFALA---VAFARGHGKDRVRRDLQSVAAFQSIFKHIRSVSQAIYQ-TSLDPKEVAMGKTKESRAYFRKMLSAHRNYE---------VSWEEVDVLMDVLGASADQFRQQQKYSDE 528
            T + E+L D        T   + +L  L P  LR     R    I+P ++++VF    L+ ++  +  + FD   P+VQ+    + ++I+  +L +  L +             +ELVVLE  L        + FSR+  L+ L     L  +   QG D +E+ LY+L+PL+  +S  Q  +  A   L QL+  DEDM A  LT +   Q E A             H  VEL++E Y   +     +I  +  +++S + VF++++D  RNR+ R+ L LT+ + SL+ +  I  FFGMN+      E HP    W  +G   +G+  +F L    +A  R    +R+R        F+S+ +++  V   + + T L  + V  GK   ++   +KMLS+  + +         VS EEVD+L ++L  + D   ++  + +E
Sbjct:  137 TPVCEILFDDNVIFYDITHRELVELFGLQPRHLRVFTQKRALTGIIPYENMVVFKFEHLKGLLFWDRIMVFDADMPSVQAFTLTLRASIRRNELIQERLKQP------------FELVVLECLLDELAVYYESSFSRLYYLINL----HLDKITSGQGDDVREDGLYKLLPLEHRMSSLQVRLDRAFKTLDQLLATDEDMAACYLTFRHE-QGEPAPPDE---------HMQVELIMETYRTRMEDLLDRIAEVFRQIESTRTVFALSLDNTRNRIARMDLSLTMGAVSLSFSMAIAGFFGMNI--THGYEHHPPLVFWSVMGLGVVGSMAIFHLCRKQLASMRSTQNNRMR----DFRVFKSVLENLDQVHYLLRRDTDLSHRIVKGGKL--TKDELKKMLSSIPDKQHDAIVGAGAVSKEEVDLLYEILNTNKDGLVERSDFLEE 549          
BLAST of EWM24191.1 vs. NCBI_GenBank
Match: gi|754342447|ref|XP_004365810.2| (hypothetical protein CAOG_00939 [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 120.168 bits (300), Expect = 5.566e-25
Identity = 107/370 (28.92%), Postives = 173/370 (46.76%), Query Frame = 0
Query:   94 LQALQVDAEGEVSTCTTSIKELLLDTQMHVRDLIALSPEALRKRGGRLTPCILPRKDVIVFVMHPLRLVISKNSCLAFDPGDPTVQSVIADISSAIKIQQLERAHLAKSGNGSVLEPYTISYELVVLEQALRSFCNQFSRIKELLGLIVETSLKALVDSQGSDQEE----QLYRLVPLKDGLSVAQHNMQEAVGVLQQLVDCDEDMLAMLLTEKAALQKEKARVSSQAARLDLNLHSDVELLLENYLRELILTGQQIKMLQARVQSAQEVFSINVDLMRNRVLRITLLLTILSTSLASAATIGAFFGMNVRLPESLETHPEAFAWITVGSICLGAGLFALAVAFARGHGKDRVRRDLQSVAAFQSIFKHI 459
            L+ LQ +  GE S   T+  +L    ++  RDL AL    LRK+     P ILPR +  +  M  ++ +I  NS L FD     ++ +   +   +K   L           S++    + +E  VLE+ L + C   S     L  +  + L+ L D   +D+ E    QL  L+     L+  +  + +    L +L+D DEDM +M LT KA         +  A R+D   H +VELLLENYL E+     +++ + A +++ ++V +I +D  RN ++R+ L L + + S+A    + A FGMN++   SLE  P  F WI    IC+G+     ++     H K  +    Q   AF S   H+
Sbjct:  209 LKTLQFNPRGEESLTETTKTDLTAQLRLQTRDLRALD---LRKQ----QPTILPRANATIINMLHVKAIIRSNSALFFDFDHAEMEELRRCLHDRLKTSSL-----------SLMFSDPLPFEFKVLEEILINVCASLS---AKLSALRPSVLQVLADLAETDRAELDKPQLTALLNYSKRLTPFEREVNDVKVALTRLLDSDEDMASMYLTTKAQ--------TGHARRIDQ--HEEVELLLENYLNEVEDVAAEVEQMIAHIRNTEDVITITLDSKRNTIMRMELQLAMGTFSVAVCGLVAASFGMNLQ--SSLEQSPHMF-WIVSTIICMGSWAIWRSL---NSHRKSHIAYLSQVSPAFASSIDHV 541          
BLAST of EWM24191.1 vs. NCBI_GenBank
Match: gi|219121750|ref|XP_002181223.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407209|gb|EEC47146.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 117.857 bits (294), Expect = 9.805e-25
Identity = 111/434 (25.58%), Postives = 196/434 (45.16%), Query Frame = 0
Query:   98 QVDAEGEVSTCTTSIKELLLDTQMHVRDLIALSPEALRKRGGRLT-----PCILPRKDVIVFVMHPLRLVISKNSCLAFDPGDPTVQSVIADISSAIKIQQLERAHLAKSGNGSVLEPYTISYELVVLEQALRSFCNQFSRIKELLGLIVETSLKALVDSQGSDQEEQLYRLVPLKDGLSVAQHNMQEAVGVLQQLVDCDEDMLAMLLTEKAALQKEKARVSSQAARLDLNLHSDVELLLENYLRELILTGQQIKMLQARVQSAQEVFSINVDLMRNRVLRITLLLTILSTSLASAATIGAFFGMNVRLPESLETHPEAFAWITVGSICLGAGLFALAVAFARGHG-KDRVRRDLQSVAAFQSIFKHIRSVSQAIYQTSLDPKEVAMGKTKESRAYFRKMLSAHRNYEVSWEEVDVLMDVLGASADQFRQQQKY 525
            Q+   G +        ELL   +M+ RDL +L+  + ++R          P I+PRK  ++     +R +   +S    D   P V+                  HLAK      +E   +S EL+ LE+ LR     +SR   L   IV++ L  +     SD    +++LVPLKD L   +  +++ V  L +L++ D++ML++LLTE+A+        ++    ++   H DV+LLL  Y R+L     +I+ +  R+QS QE  ++ +   RNR++R+ + L I + SL    T+  FFGMN  L    E    AFA + +GS   G  + + ++ +  G   + R    L  +         + ++   +  T      V  G+  +   + R +  + ++  +S  EVD+L DV     D +   +++
Sbjct:   12 QILYTGTIEIVNLHTSELL--QRMYARDLFSLNITSRQERQRSRRVRRTPPAIVPRKGQVIVSFGNVRAIAGLDSVQLLDAHKPVVRDF--------------AEHLAKVYAKGAVEA-GLSNELIFLEEVLRDTVETYSRRLRLYEPIVDSFLDKVASEVYSDT--GVHQLVPLKDSLQSFEIQVKQCVECLAELLNDDDEMLSLLLTEQAS-------AATTGKEVEFARHEDVDLLLGVYARQLGNILMEIQYMLGRLQSKQEFVALALAGYRNRMVRMNVHLGIATLSLGLGTTVAGFFGMN--LVSGFEESQTAFANVVLGSGLAGLLIASGSMNYLSGRTMQKRASERLDEIETLTGALSDMCAIDYTVKST------VEQGQILDKDTFRRILKKSRQDGHISNAEVDLLFDVFDRVKDGYIHLEEF 411          
BLAST of EWM24191.1 vs. NCBI_GenBank
Match: gi|1072235925|gb|OEU20653.1| (hypothetical protein FRACYDRAFT_180192 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 118.627 bits (296), Expect = 1.103e-24
Identity = 117/448 (26.12%), Postives = 199/448 (44.42%), Query Frame = 0
Query:   99 VDAEGEVSTCTTSIKELLLDTQMHVRDLIALSPEALRKRGG-----------RLTPCILPRKDVIVFVMHPLRLVISKNSCLAFDPGDPTVQSVIADISSAIKIQQLERAHLAKSGNGSVLEPYTISYELVVLEQALRSFCNQFS-RIKELLGLIVETSLKALVDSQGSDQEEQLYRLVPLKDGLSVAQHNMQEAVGVLQQLVDCDEDMLAMLLTEKAALQKEKARVSSQAARLDLNLHSDVELLLENYLRELILTGQQIKMLQARVQSAQEVFSINVDLMRNRVLRITLLLTILSTSLASAATIGAFFGMNVRLPESLETHPEAFAWITVGSICLGAGLFALAVA-FARG--HGKDRVRRDLQSVAAFQSIFKHIRSVSQAIYQTSLDP--KEVAMGKTKESRAYFRKMLSAHRNYE-VSWEEVDVLMDVLGASADQFRQQQKYSDE 528
            + A GE+ T      E++ +T M  RD + L   +  +R             R  P I+ R D I+  + P+R V  K+ C  FD      +S I  +S   +    ER+   KS N  +            LE  L      F+ R++    ++ +   +  VD   SD    L+++ PLK+ L   +  + +A   L Q+++ DE ML +LLTE+           +    +D   H  VE +L  Y R      Q++  L  R++S QE   + +DL RNR++++ + L IL+T+      +   FGMN  +    E    AF  +  GS      + AL+VA + R    G    +R  Q +   Q+++  +  +S      +LD   KE+  GK +  R  F+  L+  R+ +  S +E+D+L +VL    D F  ++ ++D+
Sbjct:  117 ITATGEIETTFLHPSEIMAETTMSPRDFVLLRLTSWNERTENWVGKTLIEQMRHPPTIMARNDFILLTLGPVRAVCEKDVCYFFDVHSEAAKSFIKGLSRVYQ----ERSARIKSKNRDLF-----------LETVLSDTVGSFTGRVRIFEPIVNDLLHRISVDEDFSDAN-LLHQMAPLKEQLQSFEVYVTQAYDCLTQILNDDEVMLQLLLTEQG-------EACTANVPVDFERHQHVEHVLGIYARRFSSVIQEVNYLLGRIESKQEFIELELDLFRNRLIKMNVDLAILATATGITTALTGSFGMN--MVNGFEDSNTAFIAVAAGS-----AISALSVAHYFRKMVSGAAIQKRAEQRIDEIQTMYNALSDMS------ALDCAVKEMMKGK-RMCREEFKNQLATARHSKTCSDKEIDLLFNVLNTHEDDFLDEKDFADK 527          
BLAST of EWM24191.1 vs. NCBI_GenBank
Match: gi|397638807|gb|EJK73224.1| (hypothetical protein THAOC_05163 [Thalassiosira oceanica])

HSP 1 Score: 117.087 bits (292), Expect = 4.616e-24
Identity = 132/473 (27.91%), Postives = 199/473 (42.07%), Query Frame = 0
Query:  124 RDLIALSPEAL-----RKR---------GGRLTPC-ILPRKDVIVFVMHPLRLVISKNSCLAFDPGDPTVQSVIADISSAIKIQQLERAHLAKSGNGSVL--EPYTISYELVVLEQALRSFCNQFSRIKELLGLIVETSLKALVDSQGSDQEEQLYRLVPL---KDGLSVAQHNMQEAVGVLQQ---------------------LVDCDEDMLAMLLTEKAALQKEKARVSSQAARLDLNLHSDVELLLENYLRELILTGQQIKMLQARVQSAQEVFSINVDLMRNRVLRITLLLTI--------LSTSLA-----------SAATIGAFFGMNVRLPESLETHPEAFAWITVGSICLGAGLFALAVAFARGHG-KDRVRRDLQSVAAFQSIFKHIRSVSQA----------------IYQTSLDPK-EVAMGKTKE-SRAYFRKMLSAHRNYEVSWEEVDVLMDVLGASAD 517
            RD ++L P +L     RKR          G + P  ILPR D IV     +R VIS+ S L FD   PT+         A +I +  R       NG++L  +  T  +E+ ++E  +R  C  +SR   L   IV + L  + +   S     L++LVP+       S  + N++ A+  + +                     L+D DEDM+ + LT K        R       L +  H DVELLLE Y R+L     +I  L  RVQS Q++ ++++D  RNR++R+ L L+I        LS+SL            S AT G F+GMNV  P  +E     F  I +GS   G         +  G   + R   +LQ +         + +VS+                 IYQ  LD   E+ + + K  +R  FR+ +   +   V   E+D L D+L  + D
Sbjct:  121 RDFLSLKPTSLQAATTRKRRAATNHYLAKGSIHPWFILPRDDEIVIAFGCVRAVISRTSALIFDAHKPTI------CQQATRISKKLREDTFSLHNGAILFSKAKTNDFEIDMVEGVVREVCTMYSRRLRLYEPIVNSLLDRITNEAFS--PSGLHKLVPVAPVSQSTSFLEMNVKGALNCVSKKQSNKTWCYFSSSSPPCYPADLLDNDEDMINLQLTAKQ-------RAGENNETLPMESHQDVELLLEEYARQLNSILLEIDFLLQRVQSKQDLVALSLDAFRNRMIRMNLYLSIGKIPYVYHLSSSLLNWYQGAISLAFSTATAG-FYGMNV--PNGMEDVKGVFESIILGSAIFGGAFLGGCYHYINGSSQQKRTLENLQQIEVMNRALGDMSAVSEIAFLHRRIVHCTDFILEIYQ--LDHSFELMLSEDKPITREVFRQKVYESKPDGVRDTEIDFLFDLLDYTND 573          
The following BLAST results are available for this feature:
BLAST of EWM24191.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105577|gb|EWM24191.1|0.000e+0100.00mitochondrial rna splicing protein [Nannochloropsi... [more]
gi|553193365|ref|XP_005855761.1|0.000e+099.33magnesium ion transporter mrs2 [Nannochloropsis ga... [more]
gi|1210517381|dbj|GAX23638.1|3.494e-3129.35magnesium transporter [Fistulifera solaris][more]
gi|1210526174|dbj|GAX15092.1|3.669e-3128.86magnesium transporter [Fistulifera solaris][more]
gi|857979066|emb|CEO95304.1|3.879e-3126.96hypothetical protein PBRA_004070 [Plasmodiophora b... [more]
gi|551662959|ref|XP_005834244.1|2.625e-2527.29hypothetical protein GUITHDRAFT_137462 [Guillardia... [more]
gi|754342447|ref|XP_004365810.2|5.566e-2528.92hypothetical protein CAOG_00939 [Capsaspora owczar... [more]
gi|219121750|ref|XP_002181223.1|9.805e-2525.58predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1072235925|gb|OEU20653.1|1.103e-2426.12hypothetical protein FRACYDRAFT_180192 [Fragilario... [more]
gi|397638807|gb|EJK73224.1|4.616e-2427.91hypothetical protein THAOC_05163 [Thalassiosira oc... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6498rna6498Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications