EWM24201.1, cds6475 (CDS) Nannochloropsis gaditana

Overview
NameEWM24201.1
Unique Namecds6475
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:630269..631546 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24201.1
Producthomoserine dehydrogenase
Orig transcript idgnl|cribi|Naga_100253g6.9432.mrna
GeneHSDH
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:630269..631546 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0008152metabolic process
GO:0006520cellular amino acid metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0000166nucleotide binding
GO:0016597amino acid binding
GO:0004412homoserine dehydrogenase activity
GO:0050661NADP binding
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR002912ACT_dom
IPR019811HDH_CS
IPR016204HDH
IPR001342HDH_cat
IPR016040NAD(P)-bd_dom
IPR005106Asp/hSer_DH_NAD-bd
Homology
BLAST of EWM24201.1 vs. NCBI_GenBank
Match: gi|585105589|gb|EWM24201.1| (homoserine dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 862.448 bits (2227), Expect = 0.000e+0
Identity = 425/425 (100.00%), Postives = 425/425 (100.00%), Query Frame = 0
Query:    1 MSSSLIVGLVGGGTVGGGVYDIVEHTHKDFFRSLGAHVQVKRIAVRNLTKQRDFSVAAHTELVGDWRLVLDDPEINTVIEVMGGITEAKEVVFGAIAKGKHVITANKALLAAYLPEIVDLLKKHPQVKLGYEAAVCGGIPIIHTLQNDYLGDQVSQILGIMNGTTNFMLTKMESGADYGQVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGVHVPSDQIPTKGISSVASVDFEYARLLNATIKLLGMAQLSPDGKKLSVAVSPFIVPREHPIAGTNGSTNIVNISSRNLVSSSYIGPGAGRYPTANSIVSDLVRLARGLVGPPFPVDRAMPLEPDYTSRFYIRLRIRDQLGVIRVVGEIAERHGVSIYAILQNPISDPNDIHFVVTTEPARHSQVQAFADDIEKQDFTKGPPLFFAFLL 425
            MSSSLIVGLVGGGTVGGGVYDIVEHTHKDFFRSLGAHVQVKRIAVRNLTKQRDFSVAAHTELVGDWRLVLDDPEINTVIEVMGGITEAKEVVFGAIAKGKHVITANKALLAAYLPEIVDLLKKHPQVKLGYEAAVCGGIPIIHTLQNDYLGDQVSQILGIMNGTTNFMLTKMESGADYGQVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGVHVPSDQIPTKGISSVASVDFEYARLLNATIKLLGMAQLSPDGKKLSVAVSPFIVPREHPIAGTNGSTNIVNISSRNLVSSSYIGPGAGRYPTANSIVSDLVRLARGLVGPPFPVDRAMPLEPDYTSRFYIRLRIRDQLGVIRVVGEIAERHGVSIYAILQNPISDPNDIHFVVTTEPARHSQVQAFADDIEKQDFTKGPPLFFAFLL
Sbjct:    1 MSSSLIVGLVGGGTVGGGVYDIVEHTHKDFFRSLGAHVQVKRIAVRNLTKQRDFSVAAHTELVGDWRLVLDDPEINTVIEVMGGITEAKEVVFGAIAKGKHVITANKALLAAYLPEIVDLLKKHPQVKLGYEAAVCGGIPIIHTLQNDYLGDQVSQILGIMNGTTNFMLTKMESGADYGQVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGVHVPSDQIPTKGISSVASVDFEYARLLNATIKLLGMAQLSPDGKKLSVAVSPFIVPREHPIAGTNGSTNIVNISSRNLVSSSYIGPGAGRYPTANSIVSDLVRLARGLVGPPFPVDRAMPLEPDYTSRFYIRLRIRDQLGVIRVVGEIAERHGVSIYAILQNPISDPNDIHFVVTTEPARHSQVQAFADDIEKQDFTKGPPLFFAFLL 425          
BLAST of EWM24201.1 vs. NCBI_GenBank
Match: gi|298707712|emb|CBJ26029.1| (Homoserine dehydrogenase [Ectocarpus siliculosus])

HSP 1 Score: 513.457 bits (1321), Expect = 1.921e-177
Identity = 246/406 (60.59%), Postives = 310/406 (76.35%), Query Frame = 0
Query:   20 YDIVEHTHKDFFRSLGAHVQVKRIAVRNLTKQRDFSVAAHTELVGDWRLVLDDPEINTVIEVMGGITEAKEVVFGAIAKGKHVITANKALLAAYLPEIVDLLKKHPQVKLGYEAAVCGGIPIIHTLQNDYLGDQVSQILGIMNGTTNFMLTKMES-GADYGQVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGVHVPSDQIPTKGISSVASVDFEYARLLNATIKLLGMAQLSPDGKKLSVAVSPFIVPREHPIAGTNGSTNIVNISSRNLVSSSYIGPGAGRYPTANSIVSDLVRLARGLVGPPFPVDRAMPLEPDYTSRFYIRLRIRDQLGVIRVVGEIAERHGVSIYAILQNPISDPNDIHFVVTTEPARHSQVQAFADDIEKQDFTKGPPLFFAFL 424
            Y+I E   K FF+ LG   ++ ++ VR+  K RD+ +   TE+V D+  +LDD  IN V+E+MGG+T+AK+VVF AI + KHV+TANKAL+AAYL EI +LLK+HP V  GYEAAVCGGIPII TLQNDYLGD++ ++ GIMNGTTNFML+KMES GADYG+VL EAQ LGYAEADPTADVEG DVQAKIALL KLAFG  VPSD I  KGISS+ SVDFEYA+++ +TIKLLG A  SPDG+KLSV VSP +VP  HPIA   G+ NIV++ S+N+ ++S+ GPGAGRYPTANS+V+D+VRL  G VG PFP D+   LE D+TS FY+R+   D LG+I+ VGE+A  +GVSI+AILQNPI D +++ FVVTT+P + SQV   +  I ++ + KG PL    L
Sbjct:   88 YEICEQDKKAFFQGLGCDSEIIKVCVRDSKKPRDYKMDPKTEVVTDYAAILDDDSINCVVELMGGVTDAKDVVFEAIRRNKHVVTANKALVAAYLGEIQELLKEHPGVTFGYEAAVCGGIPIIATLQNDYLGDKILKVCGIMNGTTNFMLSKMESEGADYGEVLKEAQDLGYAEADPTADVEGFDVQAKIALLTKLAFGATVPSDLIQCKGISSLTSVDFEYAKMMKSTIKLLGTAMRSPDGEKLSVFVSPVLVPLSHPIASARGAGNIVSVDSKNMGTASFSGPGAGRYPTANSVVNDIVRLGTGKVGSPFPFDKEWELESDFTSAFYLRITCSDDLGIIQRVGELAAENGVSIHAILQNPIEDVDNVDFVVTTDPCKQSQVDELSSSIGQEKWAKGVPLILTLL 493          
BLAST of EWM24201.1 vs. NCBI_GenBank
Match: gi|325192959|emb|CCA27343.1| (homoserine dehydrogenase putative [Albugo laibachii Nc14])

HSP 1 Score: 452.981 bits (1164), Expect = 2.118e-154
Identity = 235/435 (54.02%), Postives = 312/435 (71.72%), Query Frame = 0
Query:    1 MSSS---LIVGLVGGGTVGGGVYDIVEHTHK-DFFRSLGAHVQVKRIAVRNLTKQRDFS--VAAHTELVGDWRLVLDDPEINTVIEVMGGITEAKEVVFGAIAKGKHVITANKALLAAYLPEIVDLLKKHPQVKLGYEAAVCGGIPIIHTLQNDYLGDQVSQILGIMNGTTNFMLTKM-ESGADYGQVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGVHVPSDQIPTKGISSVASVDFEYARLLNATIKLLGMAQLSPDGK---KLSVAVSPFIVPREHPIAGTNGSTNIVNISSRNLVSSSYIGPGAGRYPTANSIVSDLVRLARG-LVGPPFPVDRAMPLEPDYTSRFYIRLRIRDQLGVIRVVGEIAERHGVSIYAILQNPISDPNDIHFVVTTEPARHSQVQAFADDIEKQDFTKGPPLFFAFL 424
            MSSS   L +G+ G GTVGGGV+DI+ +  K  +F S+G    + RI VR+  K+R+        T++  ++  +L+DP IN VIE+MGGI++AK++VF AI   KHVITANKAL+A ++PEI+ LL +HP V+ GYEA+VCGGIPIIHTLQ  Y GD +++I GIMNGTTN+ML+KM   G  Y  VL EAQ LGYAEA+P+ADV+G DVQ+KIA+LAKL FG  V    IPT GIS +ASVDFEYA++LN+TIKLLG+A+     K   K+SV VSP IV  ++ IA  NG+TNIVNI S NL +S+Y+G GAGR+PTANS+++D+++L+RG +   PF V +A+  E +Y + FY+R+RI D+LGVI+ +G +AE   VSIY+ILQ PI D +++ FVVTT+ A  SQVQ     I +  F K  PLFF  L
Sbjct:    1 MSSSRNVLNIGMFGCGTVGGGVFDILHNPKKIPYFDSIGVKAFISRICVRDAEKERNLRHLTPQSTKITTNYNDILEDPSINCVIELMGGISDAKDIVFRAIECDKHVITANKALVANFMPEILQLLDQHPHVRFGYEASVCGGIPIIHTLQTAYDGDTITEIAGIMNGTTNYMLSKMAREGVAYDAVLKEAQELGYAEANPSADVDGFDVQSKIAILAKLGFGGVVSPSAIPTVGISRIASVDFEYAKMLNSTIKLLGVAKRLKSDKTVSKVSVFVSPVIVSNDNVIASVNGATNIVNIQSENLNTSAYVGDGAGRFPTANSVLNDIIQLSRGEMPSAPFKVSQAIDTENNYAAHFYVRIRITDKLGVIKAIGSLAEAFSVSIYSILQAPIVDRSNVTFVVTTDEAHLSQVQQMCQKIGQLPFVKEEPLFFPIL 435          
BLAST of EWM24201.1 vs. NCBI_GenBank
Match: gi|673033464|ref|XP_008870693.1| (hypothetical protein H310_07143 [Aphanomyces invadans] >gi|574473555|gb|ETW00558.1| hypothetical protein H310_07143 [Aphanomyces invadans])

HSP 1 Score: 447.588 bits (1150), Expect = 2.214e-152
Identity = 229/427 (53.63%), Postives = 308/427 (72.13%), Query Frame = 0
Query:    4 SLIVGLVGGGTVGGGVYDIVEHTHKDFFRSLGAHVQVKRIAVRNLTKQRDFS-VAAH-TELVGDWRLVLDDPEINTVIEVMGGITEAKEVVFGAIAKGKHVITANKALLAAYLPEIVDLLKKHPQVKLGYEAAVCGGIPIIHTLQNDYLGDQVSQILGIMNGTTNFMLTKMES-GADYGQVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGVHVPSDQIPTKGISSVASVDFEYARLLNATIKLLGMAQLS-PDG-KKLSVAVSPFIVPREHPIAGTNGSTNIVNISSRNLVSSSYIGPGAGRYPTANSIVSDLVRLARGLV-GPPFPVDRAMPLEPDYTSRFYIRLRIRDQLGVIRVVGEIAERHGVSIYAILQNPISDPNDIHFVVTTEPARHSQVQAFADDIEKQDFTKGPPLFFAFL 424
            +L +GL G GTVGGGV+ I+E +   F +S+G +  +++I VRN TK    + V  H T +   +  +L+D  IN ++E+MGG+T+AK+VVF AI K KHVITANKAL+A+Y+ E+ DLL+ HP V+ GYEA+VCGGIPIIHTLQ+ Y GD V +I GIMNGTTN+ML+KME+ GA Y  VL EAQ LGYAEA+P+ADV+G DVQAKIA+LAKL FG  +P   IPT GI+ + S+DFEYA+L+N+TIKLLG+A+ S P    ++SV VSP IVPR + I    G++NIVN+ S N V+ +Y+G GAGR+PTANS+ +D+VRLA+GLV   PF   + + ++ D++ +FY+R+RI D LG+IR VG+ AE+ G+SI +ILQ PI D  ++ FVVTT+    S+V   A  IE   F   PPLF   L
Sbjct:    5 ALRIGLFGCGTVGGGVFQILE-SRATFLKSIGVNATIEKICVRNATKPELVALVQGHSTTITTKYDDILEDSSINCIVELMGGVTDAKDVVFKAIQKNKHVITANKALVASYMTELSDLLQAHPTVRFGYEASVCGGIPIIHTLQSSYSGDVVKEIAGIMNGTTNYMLSKMETEGASYEAVLKEAQDLGYAEANPSADVDGFDVQAKIAILAKLGFGCVIPPSTIPTTGITRIKSIDFEYAQLMNSTIKLLGVAKRSNPKAPNEISVFVSPIIVPRSNVIGTCGGASNIVNVVSENCVNGAYVGQGAGRFPTANSVANDIVRLAQGLVPSSPFAATQNVTIQNDFSGKFYVRIRISDGLGIIRRVGDEAEKAGISIDSILQLPIQDSRNVDFVVTTDVTHLSKVHVMAKGIEALPFVLEPPLFLPML 430          
BLAST of EWM24201.1 vs. NCBI_GenBank
Match: gi|698786820|ref|XP_009826442.1| (hypothetical protein H257_03851 [Aphanomyces astaci] >gi|574119270|gb|ETV84750.1| hypothetical protein H257_03851 [Aphanomyces astaci])

HSP 1 Score: 433.335 bits (1113), Expect = 9.042e-147
Identity = 222/426 (52.11%), Postives = 306/426 (71.83%), Query Frame = 0
Query:    5 LIVGLVGGGTVGGGVYDIVEHTHKDFFRSLGAHVQVKRIAVRNLTKQRDFS-VAAH-TELVGDWRLVLDDPEINTVIEVMGGITEAKEVVFGAIAKGKHVITANKALLAAYLPEIVDLLKKHPQVKLGYEAAVCGGIPIIHTLQNDYLGDQVSQILGIMNGTTNFMLTKMES-GADYGQVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGVHVPSDQIPTKGISSVASVDFEYARLLNATIKLLGMAQLS-PDG-KKLSVAVSPFIVPREHPIAGTNGSTNIVNISSRNLVSSSYIGPGAGRYPTANSIVSDLVRLARGLVGP-PFPVDRAMPLEPDYTSRFYIRLRIRDQLGVIRVVGEIAERHGVSIYAILQNPISDPNDIHFVVTTEPARHSQVQAFADDIEKQDFTKGPPLFFAFL 424
            L +GL G GTVGGGV+ I+E +   F +S+G +  +++I VRN TK    + V  H T +   +  +LDD  IN ++E+MGG+T+AK+VVF AI K KHVITANKAL+A ++ E+ +LL+ HP V+ GYEA+VCGGIPIIHTLQ+ Y GD + +I GIMNGTTN+ML+KME+ GA Y  VL EAQ LGYAEA+P+ADV+G DVQAKIA+LAKL FG  +P   IPT GI+ + ++DFEYA+L+++TIKLLG+A+ S P    ++SV VSP +VPR + I    G++NIVN+ S N ++ +Y+G GAGR+PTANS+ +D+VRLA+G+V P  F   + + ++ D+  +FY+R+RI D LG++R VGE AE+ G+SI +ILQ PI D  ++ FVVTT+  + S+V   A  IE   F   PPLF   L
Sbjct:    6 LRIGLFGCGTVGGGVFQILE-SRAAFLKSIGVNATIEKICVRNATKPELVALVKGHSTTITTKYDDILDDSSINCIVELMGGVTDAKDVVFKAIQKNKHVITANKALVANHMTELNELLQAHPTVRFGYEASVCGGIPIIHTLQSSYSGDVIKEIAGIMNGTTNYMLSKMETEGASYEAVLKEAQDLGYAEANPSADVDGFDVQAKIAILAKLGFGCVIPPSSIPTTGITRIKAIDFEYAQLMHSTIKLLGVAKRSNPHAPNEISVFVSPILVPRSNVIGSCGGASNIVNVVSDNCINGAYVGQGAGRFPTANSVANDIVRLAQGVVPPAAFAATQQVTIQNDFAGKFYMRIRISDGLGIVRRVGEEAEKAGISIDSILQLPIQDRRNVDFVVTTDVTQLSKVHVMAKGIEGLPFVLEPPLFLPIL 430          
BLAST of EWM24201.1 vs. NCBI_GenBank
Match: gi|299471294|emb|CBN79120.1| (Homoserine dehydrogenase [Ectocarpus siliculosus])

HSP 1 Score: 431.409 bits (1108), Expect = 5.858e-146
Identity = 215/415 (51.81%), Postives = 284/415 (68.43%), Query Frame = 0
Query:   20 YDIVEHTHKDFFRSLGAHVQVKRIAVRNLTKQRDFSVAAHTELVGDWRLVLDDPEINTVIEVMGGITEAKEVVFGAIAKGKHVITANKALLAAYLPEIVDLLKKHPQVKLGYEAAVCGGIPIIHTLQNDYLGDQVSQILGIMNGTTNFMLTKMES-GADYGQVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGVHVPSDQIPTKGISSVASVDFEYARLLNATIKLLGMAQLSPDGKKLSVAVSPFIVPREHPIAGTNGSTNIVNISSRNLVSSSYIGPGAGRYPTANSIVSDLVRLAR-GLVG--PPFPVDRAMPLEPDYTSRFYIRLRIRDQLGVIRVVGEIAERHGVSIYAILQNPISDPND------IHFVVTTEPARHSQVQAFADDIEKQDFTKGPPLFFAFL 424
            Y+I+E T K+ F++ G  V + +I VR++ K+R F +  HT +V D+  +L+D  IN V+E+MGG+T AK+VVF A+ KGKHV+TANKALLA  LPE+  L+ ++    LGYEAAVCGGIPIIH +Q  Y+GD +  ++GIMNGTTNFMLTKME+ GADY  VL EAQ LG+AEADPTADVEGHDVQAKIALLAKLAFG  V  D++P  GIS+++S DF  A+++  TIKL+G A L     KL+V VSP +VP   P+A T G  N+V + S NL  S Y GPGAGRYPTANS+V+D+VRLAR G  G  PPFP++R + LEPD+ + FY+R+   D LGV+  VG IA   GVS++++L+              +  VV T+    SQV AF D ++ +      P+  + L
Sbjct:   20 YEIMEQTKKELFKAGGVDVTIAKICVRDVNKKRSFELEKHTTMVTDYDEILEDDSINCVVELMGGVTHAKDVVFKALKKGKHVVTANKALLAQLLPEVKSLVAENAGTTLGYEAAVCGGIPIIHNMQGSYVGDSIQSVMGIMNGTTNFMLTKMETEGADYAAVLKEAQDLGFAEADPTADVEGHDVQAKIALLAKLAFGQDVALDKVPCAGISNLSSTDFACAKMMGCTIKLVGTAALGESKDKLAVFVSPVLVPLGGPLASTRGPGNVVVVRSENLTESVYAGPGAGRYPTANSVVNDIVRLARLGAAGTPPPFPLERPLELEPDFEACFYVRVTAADGLGVLSAVGAIASEAGVSVHSVLRGGEGGGGGGEEAGVVSLVVKTDSCLRSQVGAFVDGLKGKKVATADPVVMSIL 434          
BLAST of EWM24201.1 vs. NCBI_GenBank
Match: gi|1173955887|gb|OQS02791.1| (homoserine dehydrogenase [Thraustotheca clavata])

HSP 1 Score: 430.254 bits (1105), Expect = 1.278e-145
Identity = 224/431 (51.97%), Postives = 300/431 (69.61%), Query Frame = 0
Query:    1 MSSSLIVGLVGGGTVGGGVYDIVEHTHKDFFRSLGAHVQVKRIAVRNLTKQRDFSVAA--HTELVGDWRLVLDDPEINTVIEVMGGITEAKEVVFGAIAKGKHVITANKALLAAYLPEIVDLLKKHPQVKLGYEAAVCGGIPIIHTLQNDYLGDQVSQILGIMNGTTNFMLTKMES-GADYGQVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGVHVPSDQIPTKGISSVASVDFEYARLLNATIKLLGMA-QLSPDGKK-LSVAVSPFIVPREHPIAGTNGSTNIVNISSRNLVSSSYIGPGAGRYPTANSIVSDLVRLARGLVG-PPFPVDR-AMPLEPDYTSRFYIRLRIRDQLGVIRVVGEIAERHGVSIYAILQNPISDPNDIHFVVTTEPARHSQVQAFADDIEKQDFTKGPPLFFAFL 424
            MS  L +G+ G GTVGGGV++I+    K +  S+G    V +I VRN        +    +T +   +  +LDDP IN V+E+MGG+T+AK+VVF AIAK KHVITANKAL+A ++P++  LL+ HP V+ GYEA+VCGGIPIIHTLQ+ Y GD + +I GIMNGTTN+ML+KME  GA Y  VL EAQ LG+AEA+P+ADV+G DVQAKIA+LAKL FG HVP   +PT GI+ + ++DFEYA+L+ ATIKLLG+A Q  P+    +SV VSP IVP  + I   +G++NIVNI S N ++ +Y+G GAGR+PTANS+V+D+VRLA+ +V  P F   R  + LE DY  RFY+R+R+ D LG++R +G  AE  G+SI +ILQ PI D N++  VVTT+  + SQV+     + K  F +  PLF   L
Sbjct:    1 MSGPLRIGMFGCGTVGGGVFEILTKRIK-YLESVGVKATVAKICVRNTKNPAVIELVKGHNTTITSKYDDILDDPSINCVVELMGGVTDAKDVVFKAIAKNKHVITANKALIANFMPDLTSLLEAHPNVRFGYEASVCGGIPIIHTLQSSYTGDGIKEIAGIMNGTTNYMLSKMEKEGASYDAVLKEAQDLGFAEANPSADVDGFDVQAKIAILAKLGFGCHVPPSTVPTTGITRIKTIDFEYAKLMGATIKLLGIAKQTKPNSADGISVFVSPVIVPLTNVIGTVHGASNIVNIVSDNCINGAYVGQGAGRFPTANSVVNDIVRLAQTVVPIPAFGSTREGVKLENDYEGRFYVRVRLADGLGIVRSIGAHAEEAGISIDSILQLPIHDRNNVDTVVTTDLTKVSQVERMVQALSKLPFVQETPLFLPIL 430          
BLAST of EWM24201.1 vs. NCBI_GenBank
Match: gi|675202025|ref|XP_008909897.1| (hypothetical protein PPTG_14687 [Phytophthora parasitica INRA-310] >gi|566017349|gb|ETI40260.1| hypothetical protein F443_14302 [Phytophthora parasitica P1569] >gi|567954731|gb|ETK80364.1| hypothetical protein L915_13942 [Phytophthora parasitica] >gi|567983396|gb|ETL33789.1| hypothetical protein L916_13839 [Phytophthora parasitica] >gi|568012893|gb|ETL87070.1| hypothetical protein L917_13640 [Phytophthora parasitica] >gi|568042927|gb|ETM40240.1| hypothetical protein L914_13764 [Phytophthora parasitica] >gi|568090123|gb|ETN04960.1| hypothetical protein PPTG_14687 [Phytophthora parasitica INRA-310] >gi|570321026|gb|ETO68974.1| hypothetical protein F444_14316 [Phytophthora parasitica P1976] >gi|570944831|gb|ETP10088.1| hypothetical protein F441_14195 [Phytophthora parasitica CJ01A1] >gi|570976347|gb|ETP38174.1| hypothetical protein F442_14150 [Phytophthora parasitica P10297] >gi|970654585|gb|KUF92878.1| Homoserine dehydrogenase [Phytophthora nicotianae])

HSP 1 Score: 425.246 bits (1092), Expect = 1.554e-143
Identity = 228/436 (52.29%), Postives = 307/436 (70.41%), Query Frame = 0
Query:    1 MSSSLIVGLVGGGTVGGGVYDIVEH-THKDFFRSLGAHVQVKRIAVRNLTKQRDFS--VAAHTELVGDWRLVLDDPEINTVIEVMGGITEAKEVVFGAIAKGKHVITANKALLAAYLPEIVDLLKKHPQVKLGYEAAVCGGIPIIHTLQNDYLGDQVSQILGIMNGTTNFMLTKMES-GADYGQVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGVHVPSDQIPTKGISSVASVDFEYARLLNATIKLLGMA-QLSPDGKK------LSVAVSPFIVPREHPIAGTNGSTNIVNISSRNLVSSSYIGPGAGRYPTANSIVSDLVRLARGLVG-PPFPVDRAMPLEPDYTSRFYIRLRIRDQLGVIRVVGEIAERHGVSIYAILQNPISDPNDIHFVVTTEPARHSQVQAFADDIEKQDFTKGPPLFFAFL 424
            MS +L VGL G GTVG GV+D++     +  F ++G +  V +I V+NL+K R      A+ T+    +  +L+D  IN ++E+MGG+ +AK+VVF AI  GKHVITANKAL+A ++PEIV LL+ HP V+ GYEAAV GGIPIIHTLQN Y  D +++I GIMNGTTN+ML+KME+ G  Y  VL EAQ LGYAEA+P+ADV+G DVQ+KIA+LAKL FG  V    IPT GIS V+S DFEYA+++++TIKLLG+A QL P  +K      ++V VSP +V R + IA  +G+TN+VN+ S NL SS+Y+GPGAGR+PTANS+++D+++LARG     PF     + L+PDY + FY+RL I D LGVIR VG++AE  GVSIY+ILQ PI D  ++ FVVTTE A  S+V++    +    F +  PL+   +
Sbjct:    1 MSKTLNVGLFGCGTVGAGVFDLLHSPVRRQKFAAMGVNALVSKICVQNLSKDRGLKHFSASETKFTSKYSDILEDKSINCIVELMGGVDDAKDVVFSAIKAGKHVITANKALVANFMPEIVQLLQDHPDVRFGYEAAVAGGIPIIHTLQNAYNSDTITEIAGIMNGTTNYMLSKMEAEGVAYDAVLKEAQDLGYAEANPSADVDGFDVQSKIAILAKLGFGGIVKPSDIPTVGISRVSSADFEYAKMMDSTIKLLGVAKQLKPADEKTGKPQEVTVYVSPVVVKRSNVIASISGATNLVNVRSDNLDSSAYVGPGAGRFPTANSVMNDIIQLARGDAPLDPFKASVPLTLQPDYEAHFYVRLTITDGLGVIRYVGQLAEESGVSIYSILQAPIVDRANVQFVVTTETALLSKVRSMCQKLAALPFVQEEPLYLPIM 436          
BLAST of EWM24201.1 vs. NCBI_GenBank
Match: gi|301118829|ref|XP_002907142.1| (homoserine dehydrogenase, putative [Phytophthora infestans T30-4] >gi|262105654|gb|EEY63706.1| homoserine dehydrogenase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 424.476 bits (1090), Expect = 3.125e-143
Identity = 229/436 (52.52%), Postives = 309/436 (70.87%), Query Frame = 0
Query:    1 MSSSLIVGLVGGGTVGGGVYDIVEH-THKDFFRSLGAHVQVKRIAVRNLTKQRDFS--VAAHTELVGDWRLVLDDPEINTVIEVMGGITEAKEVVFGAIAKGKHVITANKALLAAYLPEIVDLLKKHPQVKLGYEAAVCGGIPIIHTLQNDYLGDQVSQILGIMNGTTNFMLTKMES-GADYGQVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGVHVPSDQIPTKGISSVASVDFEYARLLNATIKLLGMA-QLSP----DGK--KLSVAVSPFIVPREHPIAGTNGSTNIVNISSRNLVSSSYIGPGAGRYPTANSIVSDLVRLARGLVG-PPFPVDRAMPLEPDYTSRFYIRLRIRDQLGVIRVVGEIAERHGVSIYAILQNPISDPNDIHFVVTTEPARHSQVQAFADDIEKQDFTKGPPLFFAFL 424
            MS SL VGL G GTVG GV+D++     +  F ++G +  V +I V+NL+K R      A+ T     +  +L+D  IN ++E+MGG+ +AK+VVFGAI  GKHVITANKAL+A ++PEIV LL+ HP+V+ GYEAAV GGIPIIHTLQN Y  D +++I GIMNGTTN+ML+KME+ G  Y  VL EAQ LGYAEA+P+ADV+G DVQ+KIA+LAKL FG  V    IPT GIS V++ DFEYA+++++TIKLLG+A QL+P     GK  +++V VSP +V R + IA   G+TN+VN+ S NLVSS+Y+GPGAGR+PTANS+++D+++LA G     PF     + L+PDY + FY+RL I D LGVIR VG++AE  GVSIY+ILQ PI D  ++ FVVTTE +  S+V++    +    F +  PL+   +
Sbjct:    1 MSKSLNVGLFGCGTVGAGVFDLLHSPVRRQKFMAMGVNALVSKICVQNLSKDRGLKHFSASETTFTSKYSDILEDKNINCIVELMGGVDDAKDVVFGAIKAGKHVITANKALVANFMPEIVQLLQDHPEVRFGYEAAVAGGIPIIHTLQNAYNSDTITEIAGIMNGTTNYMLSKMEAEGVAYDAVLKEAQDLGYAEANPSADVDGFDVQSKIAILAKLGFGGIVKPSDIPTVGISRVSAADFEYAKMMDSTIKLLGVAKQLTPADEGTGKPQEVTVYVSPVVVKRSNVIASIGGATNLVNVRSDNLVSSAYVGPGAGRFPTANSVMNDIIQLAHGDAPLDPFKASVPLTLQPDYEAHFYVRLTITDGLGVIRHVGQLAEESGVSIYSILQAPIVDRANVQFVVTTETSLLSKVRSMCQKLAALPFVQEEPLYLPIM 436          
BLAST of EWM24201.1 vs. NCBI_GenBank
Match: gi|301104148|ref|XP_002901159.1| (homoserine dehydrogenase, putative [Phytophthora infestans T30-4] >gi|262101093|gb|EEY59145.1| homoserine dehydrogenase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 423.705 bits (1088), Expect = 6.275e-143
Identity = 229/436 (52.52%), Postives = 308/436 (70.64%), Query Frame = 0
Query:    1 MSSSLIVGLVGGGTVGGGVYDIVEH-THKDFFRSLGAHVQVKRIAVRNLTKQRDFS--VAAHTELVGDWRLVLDDPEINTVIEVMGGITEAKEVVFGAIAKGKHVITANKALLAAYLPEIVDLLKKHPQVKLGYEAAVCGGIPIIHTLQNDYLGDQVSQILGIMNGTTNFMLTKMES-GADYGQVLAEAQALGYAEADPTADVEGHDVQAKIALLAKLAFGVHVPSDQIPTKGISSVASVDFEYARLLNATIKLLGMA-QLSP----DGK--KLSVAVSPFIVPREHPIAGTNGSTNIVNISSRNLVSSSYIGPGAGRYPTANSIVSDLVRLARGLVG-PPFPVDRAMPLEPDYTSRFYIRLRIRDQLGVIRVVGEIAERHGVSIYAILQNPISDPNDIHFVVTTEPARHSQVQAFADDIEKQDFTKGPPLFFAFL 424
            MS SL VGL G GTVG GV+D++     +  F ++G +  V +I V+NL+K R      A+ T     +  +L+D  IN ++E+MGG+ +AK+VVFGAI  GKHVITANKAL+A ++PEIV LL+ HP+V+ GYEAAV GGIPIIHTLQN Y  D +++I GIMNGTTN+ML+KME+ G  Y  VL EAQ LGYAEA+P+ADV+G DVQ+KIA+LAKL FG  V    IPT GIS V++ DFEYA+++++TIKLLG+A QL+P     GK  +++V VSP +V R + IA   G+TN+VN+ S NLVSS+Y+GPGAGR+PTANS+++D+++LA G     PF     + L+PDY + FY+RL I D LGVIR VG+ AE  GVSIY+ILQ PI D  ++ FVVTTE +  S+V++    +    F +  PL+   +
Sbjct:    1 MSKSLNVGLFGCGTVGAGVFDLLHSPVRRQKFMAMGVNALVSKICVQNLSKDRGLKHFSASETTFTSKYSDILEDKNINCIVELMGGVDDAKDVVFGAIKAGKHVITANKALVANFMPEIVQLLQDHPEVRFGYEAAVAGGIPIIHTLQNAYNSDTITEIAGIMNGTTNYMLSKMEAEGVAYDAVLKEAQDLGYAEANPSADVDGFDVQSKIAILAKLGFGGIVKPSDIPTVGISRVSAADFEYAKMMDSTIKLLGVAKQLTPADEGTGKPQEVTVYVSPVVVKRSNVIASIGGATNLVNVRSDNLVSSAYVGPGAGRFPTANSVMNDIIQLAHGDAPLDPFKASVPLTLQPDYEAHFYVRLTITDGLGVIRHVGQFAEESGVSIYSILQAPIVDRANVQFVVTTETSLLSKVRSMCQKLAALPFVQEEPLYLPIM 436          
The following BLAST results are available for this feature:
BLAST of EWM24201.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105589|gb|EWM24201.1|0.000e+0100.00homoserine dehydrogenase [Nannochloropsis gaditana... [more]
gi|298707712|emb|CBJ26029.1|1.921e-17760.59Homoserine dehydrogenase [Ectocarpus siliculosus][more]
gi|325192959|emb|CCA27343.1|2.118e-15454.02homoserine dehydrogenase putative [Albugo laibachi... [more]
gi|673033464|ref|XP_008870693.1|2.214e-15253.63hypothetical protein H310_07143 [Aphanomyces invad... [more]
gi|698786820|ref|XP_009826442.1|9.042e-14752.11hypothetical protein H257_03851 [Aphanomyces astac... [more]
gi|299471294|emb|CBN79120.1|5.858e-14651.81Homoserine dehydrogenase [Ectocarpus siliculosus][more]
gi|1173955887|gb|OQS02791.1|1.278e-14551.97homoserine dehydrogenase [Thraustotheca clavata][more]
gi|675202025|ref|XP_008909897.1|1.554e-14352.29hypothetical protein PPTG_14687 [Phytophthora para... [more]
gi|301118829|ref|XP_002907142.1|3.125e-14352.52homoserine dehydrogenase, putative [Phytophthora i... [more]
gi|301104148|ref|XP_002901159.1|6.275e-14352.52homoserine dehydrogenase, putative [Phytophthora i... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6491rna6491Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications