EWM24207.1, cds6468 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24207.1 vs. NCBI_GenBank
Match: gi|585105596|gb|EWM24207.1| (hypothetical protein Naga_100217g3 [Nannochloropsis gaditana]) HSP 1 Score: 746.503 bits (1926), Expect = 0.000e+0 Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0 Query: 1 MPSGTKGYVASTRLWLTIGAGISLVATGALVMVYLFLAQQQGRPSAQSRTKQQGADRSRVPGEEEELELSDIEDEDQISQEQSLVLPIYGRNSRQSRRRRRRGDTAGVPHPRHAKRLLGPHILSYPKDIRLQHMTKIVIQTKEETFSRHRCKSCWLLERHCLCDGLVPVSLPMDFSVLLHYKEFLRISNSGHLLALAHPGSRLLVEGKEDDERKLSALEAAAVREPYSVVVLMPCAGSLSISELKQRREESGTTGRLHVILLDGTWRQARALNRRVSEKVVRVRVEVTEKPSMFRLRTRTRADGISTLEAALSLVEEWGKEGRQEGEAGVAEMLRLLGVHNERVLVASGKPAKVGDRLVKHPYEEKQRE 369 MPSGTKGYVASTRLWLTIGAGISLVATGALVMVYLFLAQQQGRPSAQSRTKQQGADRSRVPGEEEELELSDIEDEDQISQEQSLVLPIYGRNSRQSRRRRRRGDTAGVPHPRHAKRLLGPHILSYPKDIRLQHMTKIVIQTKEETFSRHRCKSCWLLERHCLCDGLVPVSLPMDFSVLLHYKEFLRISNSGHLLALAHPGSRLLVEGKEDDERKLSALEAAAVREPYSVVVLMPCAGSLSISELKQRREESGTTGRLHVILLDGTWRQARALNRRVSEKVVRVRVEVTEKPSMFRLRTRTRADGISTLEAALSLVEEWGKEGRQEGEAGVAEMLRLLGVHNERVLVASGKPAKVGDRLVKHPYEEKQRE Sbjct: 1 MPSGTKGYVASTRLWLTIGAGISLVATGALVMVYLFLAQQQGRPSAQSRTKQQGADRSRVPGEEEELELSDIEDEDQISQEQSLVLPIYGRNSRQSRRRRRRGDTAGVPHPRHAKRLLGPHILSYPKDIRLQHMTKIVIQTKEETFSRHRCKSCWLLERHCLCDGLVPVSLPMDFSVLLHYKEFLRISNSGHLLALAHPGSRLLVEGKEDDERKLSALEAAAVREPYSVVVLMPCAGSLSISELKQRREESGTTGRLHVILLDGTWRQARALNRRVSEKVVRVRVEVTEKPSMFRLRTRTRADGISTLEAALSLVEEWGKEGRQEGEAGVAEMLRLLGVHNERVLVASGKPAKVGDRLVKHPYEEKQRE 369
BLAST of EWM24207.1 vs. NCBI_GenBank
Match: gi|528265813|gb|EPY39919.1| (hypothetical protein AGDE_04009 [Angomonas deanei]) HSP 1 Score: 92.0485 bits (227), Expect = 8.738e-17 Identity = 66/193 (34.20%), Postives = 97/193 (50.26%), Query Frame = 0 Query: 151 CKSCWLLERHCLCDGL------VPVSL---PMDFSVLLHYKEFLRISNSGHLLALAHPGSRLLVEGKEDDERKLSALEAAAVREPYSV--VVLMPCAGSLSISELKQRREESGTTGRLHVILLDGTWRQARALNRRVSEKVVRVRVEVTEK-PSMF-RLRTRTRADGISTLEAALSLVEEWGKEGRQEGEAGV 330 C CW + C+C+ L +P ++ ++L H E +R +NSGH+ A S + V G E+D+ ++ L E ++V V L P GS IS E+G R+H+IL D TW QA +LNR + +V RV +++ E S+F LR RTR G+STLEA V + E EA + Sbjct: 139 CLFCWFSTQMCMCEELERYKKELPNTVLQGKTPVTMLFHSDELMRSTNSGHIAAYL-LDSPVRVWGLEEDDDLITHLPGVEEGEGHAVYNVSLYPEKGSPDISHFISNVTETGADARIHLILSDSTWGQALSLNRHIPREVTRVSLDIDETYESLFAHLRKRTRETGVSTLEATTMAVHQCLTAFGHEAEANL 330
BLAST of EWM24207.1 vs. NCBI_GenBank
Match: gi|294948148|ref|XP_002785640.1| (conserved hypothetical protein [Perkinsus marinus ATCC 50983] >gi|239899619|gb|EER17436.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]) HSP 1 Score: 91.2781 bits (225), Expect = 2.439e-16 Identity = 72/245 (29.39%), Postives = 117/245 (47.76%), Query Frame = 0 Query: 92 NSRQSRRRRRRGDTAGVPH----PRHAKRLLGPHILSYPKDIRLQHMTKIVIQTKEETFSRHRCKSCWLLERHCLCDGLVPV--------SLPMDFSVLLHYKEFLRISNSGHLLALAHPGSRLLVEGKEDDERKLSALEAAAVREPYSVVVLMPCAGSLSISELKQRREESGT-----TGRLHVILLDGTWRQARALNRRVSEKVVRVRVEVTEKPSMFRLRTRTRADGISTLEAALSLVEEWG 319 N +Q + +R + A + H PR + +G I + + ++H HRC C + ++ C+CD L + +L + +V +H KE R SN+G +L + +R+ V+ +D + AL+ A VL P S ++ EL+ E S +L +IL+DGTW+QA+ L +R+ V RVR+ T S F RT+++AD + T+EAA LV E G Sbjct: 47 NKKQWKETKRPINCARIEHLSSLPREERERVGVAITTATSKLMIEH--------------SHRCAECAMKKKLCVCDELRSMRPMEDERLNLNFEIAVYMHAKERYRASNTGKVLEKLY-DARIYVDSVVED---MQALQEAIDAHKSRCCVLFPSTESKTVEELRSEGEASQAAHCEGNEKLLIILVDGTWKQAKRLQKRIDHSVPRVRLMPTTL-SRFLCRTQSQADRVCTVEAAALLVSELG 272
BLAST of EWM24207.1 vs. NCBI_GenBank
Match: gi|1134876375|gb|OMJ74278.1| (hypothetical protein SteCoe_26832 [Stentor coeruleus]) HSP 1 Score: 85.8853 bits (211), Expect = 8.145e-16 Identity = 57/182 (31.32%), Postives = 91/182 (50.00%), Query Frame = 0 Query: 147 SRHRCKSCWLLERHCLCDGLVPVSLPMD--FSVLLHYKEFLRISNSGHLLALAHPGSRLLVEGKEDDERKLSALEAAAVREPYSVVVLMPCAGSLSISELKQRREESGTTGRLHVILLDGTWRQARALNRRVSEKVVRVRVEVTEKPSMFRLRTRTRADGISTLEAALSLVEEWGKEGRQEG 326 S C+ CWLL+ C+C L +S P + F + LHYKE++R SN+G L+ GS + + G E++ +KL L+ +E ++ VL P S+ + + R+ ILLD TW Q R L + E RV++ V S+ + + + +STLE A +++ G EG Sbjct: 22 SERWCEDCWLLKHLCICSNLASLSNPTNSTFHLFLHYKEYMRTSNTGILIKKLIQGSDVHIWGIEEERQKL--LKKLETQE--NICVLYPGDKSIPLETWIENRKGLAKD----FILLDSTWNQGRKLLNCLPENFTRVKI-VNPGDSLIKCKKQANKGYLSTLECAAYILKALGDAAGFEG 194
BLAST of EWM24207.1 vs. NCBI_GenBank
Match: gi|857972777|emb|CEP00986.1| (hypothetical protein PBRA_008298 [Plasmodiophora brassicae]) HSP 1 Score: 85.1149 bits (209), Expect = 1.647e-15 Identity = 59/182 (32.42%), Postives = 91/182 (50.00%), Query Frame = 0 Query: 148 RHRCKSCWLLERHCLCDGLVPVS----LPMDFSVLLHYKEFLRISNSGHLLALAHPGSRLLVEGKEDDERKL-SALEAAAVREPYSVVVLMPCAGSLSISELKQRREESGTTGRLHVILLDGTWRQARALNRRVSEKVVRVRVEVTEKPSMFRLRTRTRADGISTLEAALSLVEEWGKEGRQ 324 +H+C+ CW L ++C C+ + VS P +L+H++E R SNSG +L LA P +R V G + E L + A R V+L P GS++ EL R E G +L +I+LDGTW +RA++R + + RVR+ + + R + + T A L + E G Q Sbjct: 30 KHKCQRCWFLAQNCACEAMERVSGSVFAPHRVLLLMHFRELCRASNSGRIL-LAPPSNRGFVFGMQAQESALIGEINAFKGRS----VILWPGPGSITFEEL---RCEPGE--QLQIIVLDGTWNNSRAMDRVLPRDIPRVRLSGSTRTEFGGTRKHKDKERVCTAGACLHALRELGAPPEQ 201
BLAST of EWM24207.1 vs. NCBI_GenBank
Match: gi|955162684|emb|CUG93466.1| (Hypothetical protein, putative [Bodo saltans]) HSP 1 Score: 86.6557 bits (213), Expect = 6.059e-15 Identity = 76/239 (31.80%), Postives = 111/239 (46.44%), Query Frame = 0 Query: 145 TFSRHRCKSCWLLERHCLCDGLV-----------PVSLPMDFSVLLHYKEFLRISNSGHLLALAHPGSRLLVEGKEDDERKLSALE-----AAAVREPYSVVV-----LMPCAGSLSISEL------KQRREES-------------------GTTGRLHVILLDGTWRQARALNRRVSEKVVRVRVEVTEK-PSMF-RLRTRTRADGISTLEA-ALSLVEEWGKEGRQEGEAGVAEML 334 T R RC CWL C+C L P+S ++LLH +E +R +N+GH+ A S + V G DD+ L+ +E A P SVV+ L P G+ IS++ KQ+ +E+ G RLH+IL DGTW QA +NR V + RV +++ + S+F LR +TR+ G+STLEA AL++ + G E V + L Sbjct: 123 TMKRLRCVYCWLPNPSCVCGDLEKMRQMRQELLHPLSQVAIVTMLLHSEELMRTTNTGHIAAFIL-DSEIRVWGIADDDAWLAQVERHVQDTTATAMPASVVITHPALLYPEDGAQLISDVAFVEPEKQQGDETKSVAYSGAPSSPLAPLAATGMIHRLHIILSDGTWTQAHRVNRHVPRSIPRVALKIDDSYESLFASLRKQTRSTGVSTLEATALAVAQRMQAVGHAEDALLVEQHL 360
BLAST of EWM24207.1 vs. NCBI_GenBank
Match: gi|342180379|emb|CCC89856.1| (conserved hypothetical protein [Trypanosoma congolense IL3000]) HSP 1 Score: 83.5741 bits (205), Expect = 4.038e-14 Identity = 61/211 (28.91%), Postives = 100/211 (47.39%), Query Frame = 0 Query: 151 CKSCWLLERHCLCDGLVPV---------SLPMDFSVLLHYKEFLRISNSGHLLALAHPGSRLLVEGKEDDERKLSALEA---------AAVREPYSVVVLMPCAGSLSISELKQRREESGTTGRLHVILLDGTWRQARALNRRVSEKVVRVRVEVTEK-PSMFR-LRTRTRADGISTLEAALSLVEEWGKEGRQEGEAGVAEMLRLLGVHN 341 C CW + C CD L P + +V++H +E +R +NSGH++A G+ L + G +D+ L+ L+A A+ P L P +G+ + + + + + ++H++LLD TW QA ALNR + + RV + + E S+F+ LR +TR G+ST EA +++ G AG VHN Sbjct: 82 CLWCWFSKGLCFCDRLEEYRQRLLEAQRGTPPEITVVMHPEEIMRGTNSGHIIAFI-LGAPLRIWGVAEDDSYLNTLQAVDLVGNGYSASGETPLHTASLYPESGAPLLEDFVKGID---SAHKIHLLLLDATWSQANALNRHIPRHIPRVGLRIDESYSSLFKALRKQTRQSGVSTFEATSMALQQCCNSQHIGGNAGAV-------VHN 281
BLAST of EWM24207.1 vs. NCBI_GenBank
Match: gi|686628121|ref|XP_009307135.1| (hypothetical protein DQ04_00371030 [Trypanosoma grayi] >gi|657145227|gb|KEG14617.1| hypothetical protein DQ04_00371030 [Trypanosoma grayi]) HSP 1 Score: 82.4185 bits (202), Expect = 1.118e-13 Identity = 68/206 (33.01%), Postives = 102/206 (49.51%), Query Frame = 0 Query: 151 CKSCWLLERHCLCDGLVP-----VSLPMDFSV----LLHYKEFLRISNSGHLLALAHPGSRLLVEGKEDDERKLSALEAAAVREPYSVVV-LMPCAGSLSISELKQRREESGTTGRLHVILLDGTWRQARALNRRVSEKVVRVRVEVTEK-PSMFR-LRTRTRADGISTLEAALSLVEEWGKEGRQEGEAGVAEMLRLLGVHNERV 344 C CW + C C L +S +D +V +LH E +R +NSGH+ A G+ + V G E+D+ L+ L A A + S V L P ++ + Q E+ GT ++H++L DGTW QA ALNR + + RV + + S+F+ LR +TR G+STLEA +E+ + EA V+ L E V Sbjct: 85 CLWCWFSKDMCFCAKLEEYREQMLSAELDSAVKVTMVLHAAEVMRTTNSGHIAAFIL-GAPIRVWGVEEDDAYLAELPAVAADDDGSYAVSLYPEPDAVLLENFVQNLEK-GT--KVHLVLSDGTWGQATALNRHIPHHIPRVALFIDRSYKSLFKALRKQTRETGVSTLEATNMAMEQCLRGLYGANEAAVSSSSTLTAAMKEFV 286
BLAST of EWM24207.1 vs. NCBI_GenBank
Match: gi|1098427531|gb|OII75592.1| (hypothetical protein cubi_02113 [Cryptosporidium ubiquitum]) HSP 1 Score: 80.4925 bits (197), Expect = 2.616e-13 Identity = 54/197 (27.41%), Postives = 99/197 (50.25%), Query Frame = 0 Query: 150 RCKSCWLLER-HCLCDGL---------VPVSLPMDFSVLLHYKEFLRISNSGHLLALAHPGSRLLVEGKEDDERKLSALEAAAVREPYSVVVLMPCAGSLSI----SELKQRR---------EESGTTG------RLHVILLDGTWRQARALNRRVSEKVVRVRVEVTEKPSMFRLRTRTRADGISTLEAALSLVEE 317 +C+SC+L+++ HC+C L V + F + ++ +E+ R SN+G L+ PGS +L+ G +L + + + V+L P S S+ S+LK+ + E S + +L VIL+DGTW QA+++N+ + +++ R+ + LR + +A IST+EA+ L++E Sbjct: 67 KCRSCFLVKKDHCICTNLSRLADQIKKVQTYPEIKFIIFMNDREYFRSSNTGKLVKHLIPGSEILIHGIPGSSERLEEILSQDLEIYNETVILYPSKDSKSVLDYFSDLKENKYFELLGKEPENSLFSTEFYRKLKLKVILIDGTWSQAKSINKSLPKQIKRIVINSKLISDFGPLRKQNKAGNISTVEASSLLIKE 263
BLAST of EWM24207.1 vs. NCBI_GenBank
Match: gi|72387273|ref|XP_844061.1| (hypothetical protein [Trypanosoma brucei brucei TREU927] >gi|62360220|gb|AAX80638.1| hypothetical protein, conserved [Trypanosoma brucei] >gi|70800593|gb|AAZ10502.1| hypothetical protein, conserved [Trypanosoma brucei brucei TREU927]) HSP 1 Score: 81.6481 bits (200), Expect = 2.682e-13 Identity = 57/190 (30.00%), Postives = 95/190 (50.00%), Query Frame = 0 Query: 151 CKSCWLLERHCLCDGL---------VPVSLPMDFSVLLHYKEFLRISNSGHLLALAHPGSRLLVEGKEDDERKLSALEAAAVRE---------PYSVVVLMPCAGSLSISELKQRREESGTTGRLHVILLDGTWRQARALNRRVSEKVVRVRVEVTEK-PSMFR-LRTRTRADGISTLEA-ALSLVEEWG 319 C CW + C C+ L + ++ +++LH +EF+R +NSGH+ A G+ + + G +D+ L+ L A E V L P + + + + G+T R+H++L+D TW QA ALNR + + RV + + E S+F+ LR RTR G+ST EA ++L + +G Sbjct: 170 CLWCWFSKSLCFCNRLEQYRQRMLEIGQHSAVEVTIVLHPEEFMRGTNSGHIAAFI-LGAPIRIWGVPEDDAYLNDLPAVRTEEGNYDFPSDDAIHTVSLYPEKDAFLLEDFVK---NIGSTHRVHLLLMDATWSQANALNRHIPRHIPRVALRIDESYASLFKALRKRTRQSGVSTFEATTMALQQCYG 355 The following BLAST results are available for this feature:
BLAST of EWM24207.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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