EWM24211.1, cds6466 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24211.1 vs. NCBI_GenBank
Match: gi|585105600|gb|EWM24211.1| (Bud13 [Nannochloropsis gaditana] >gi|585105601|gb|EWM24212.1| Bud13 [Nannochloropsis gaditana]) HSP 1 Score: 736.873 bits (1901), Expect = 0.000e+0 Identity = 371/371 (100.00%), Postives = 371/371 (100.00%), Query Frame = 0 Query: 1 MGRRGSCATQAGAQDLSPPRRPRSAGPQGDVSPPRRTRPERLPGTDASSPRRPRRRSPSVSPFDPSCRSNTTSGEPSRPHQPRPSPSPSRDPGPEGGDISPPRRRRRHDSPSPLRRRRRHDTPSPSPTRDGDPPKRGGQGTRDDRGAVAVAVVSESGKTASTRPKEDGLKTGAEFRAELEAQKDAEAHAWAEGAKDAGVTGQHAETVVRDRRGRKLEMLSEFLNQEAYKEGKAAKEAKEEYEWGRGKVQKEKDEDHRRELEDIKNAPFARYESDLKLERARKEEIRADDPMAAYMLQKQRDALAQEATRSGKVLKPEYKGPPPKPNRFNIRPGYRWDGIDRGNGFEARWFKRQSELVTKHERDRAWGMSDL 371 MGRRGSCATQAGAQDLSPPRRPRSAGPQGDVSPPRRTRPERLPGTDASSPRRPRRRSPSVSPFDPSCRSNTTSGEPSRPHQPRPSPSPSRDPGPEGGDISPPRRRRRHDSPSPLRRRRRHDTPSPSPTRDGDPPKRGGQGTRDDRGAVAVAVVSESGKTASTRPKEDGLKTGAEFRAELEAQKDAEAHAWAEGAKDAGVTGQHAETVVRDRRGRKLEMLSEFLNQEAYKEGKAAKEAKEEYEWGRGKVQKEKDEDHRRELEDIKNAPFARYESDLKLERARKEEIRADDPMAAYMLQKQRDALAQEATRSGKVLKPEYKGPPPKPNRFNIRPGYRWDGIDRGNGFEARWFKRQSELVTKHERDRAWGMSDL Sbjct: 1 MGRRGSCATQAGAQDLSPPRRPRSAGPQGDVSPPRRTRPERLPGTDASSPRRPRRRSPSVSPFDPSCRSNTTSGEPSRPHQPRPSPSPSRDPGPEGGDISPPRRRRRHDSPSPLRRRRRHDTPSPSPTRDGDPPKRGGQGTRDDRGAVAVAVVSESGKTASTRPKEDGLKTGAEFRAELEAQKDAEAHAWAEGAKDAGVTGQHAETVVRDRRGRKLEMLSEFLNQEAYKEGKAAKEAKEEYEWGRGKVQKEKDEDHRRELEDIKNAPFARYESDLKLERARKEEIRADDPMAAYMLQKQRDALAQEATRSGKVLKPEYKGPPPKPNRFNIRPGYRWDGIDRGNGFEARWFKRQSELVTKHERDRAWGMSDL 371
BLAST of EWM24211.1 vs. NCBI_GenBank
Match: gi|698778429|ref|XP_009822258.1| (hypothetical protein H257_00989 [Aphanomyces astaci] >gi|574121919|gb|ETV87395.1| hypothetical protein H257_00989 [Aphanomyces astaci]) HSP 1 Score: 174.866 bits (442), Expect = 8.876e-46 Identity = 136/370 (36.76%), Postives = 189/370 (51.08%), Query Frame = 0 Query: 15 DLSPPRR-------PRSAGPQGDVSPPRRTRPERLP---GTDASSPRRPRRRSPSVSPFD--PSCRSNTTSGEPSRPHQPRPSPSPSRDPGPEGGDISPPRRRRRHDSPSPLRRRRRHDTPSPSPTRDGDPPKRGGQGTRDDRGAVAVAVVSESGKTASTRPKEDGLKTGAEFRAELEAQKDAEAHAWAEGAKDAGVTGQHAETVVRDRRGRKLEMLSEFLNQEAYKEGKAAKEAKEEYEWGRGKVQKEKDEDHRRELEDIKNAPFARYESDLKLERARKEEIRADDPMAAYMLQKQRDALAQEATRSGKVLKPEYKGPPPKPNRFNIRPGYRWDGIDRGNGFEARWFKRQSELVTKHERDR-AWGMSDL 371 D SPPRR P S + D SPPRR+ ++ P G D SSPRR R FD PS R ++S RPH+ +ISPPR R + RRR T S RDG+ + DD+ AV G+ TG EF+A+ + + + A+ +D + G+ AET+ RD+RGRKL+ML E Q+ ++GK +EAKEE+EWG GKV+KE+ H++EL+ ++ PFAR+ D +LE RK + RA DPM + + + D A++ + K KP Y GPP PNRFNI PGYRWDG+ RGN +E + Q H++D W +D+ Sbjct: 283 DSSPPRRSQRENSPPSSRSRRVDASPPRRSHQDKSPRRSGRDTSSPRRRSR-------FDVAPSSRKESSSPPRRRPHE----------------EISPPRPRSSTSTSKFDPRRRDAPTSPKSGRRDGNASSPRRNPSNDDQLAVG------------------GVFTGKEFKAQQDQLRATQQAAF----QDEALMGKQAETIYRDKRGRKLDMLMEMQRQQEIQDGKRKREAKEEFEWGTGKVRKEELRSHQQELDAMRAKPFARHNDDAELESLRKAKPRAFDPMESSLFKDDVDDTAKKGPK--KNQKPTYAGPPAPPNRFNIPPGYRWDGVVRGNNWEEKALL-QVNARKAHKQDMYQWATADM 604
BLAST of EWM24211.1 vs. NCBI_GenBank
Match: gi|298709398|emb|CBJ31331.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 168.703 bits (426), Expect = 2.402e-43 Identity = 129/286 (45.10%), Postives = 164/286 (57.34%), Query Frame = 0 Query: 98 DISPPRRRRRHDSPSPLRRRRR---------HDTPSPSPTRDGDPPKRGGQGTRDDRGAVAVAVVSESGKTASTRPKEDGLKTGAEFRA---ELEAQKDAEAHAWAEGAKDAGVTGQHAETVVRDRRGRKLEMLSEFLNQEAYKEGKAAKEAKEEYEWGRGKVQKEKDEDHRRELEDIKNAPFARYESDLKLERARKEEIRADDPMAAYMLQKQRDALAQEATRSGKVLKPEYKGPPPKPNRFNIRPGYRWDGIDRGNGFEARWFKRQSELVTKHERDRAWGMSDL 371 D SPPRR R DS S HD SP DG K GG G V + SG A GL++G +F+ L+ + DAE D +GQ AETV RD++GRKL+ML+EF+ + + GK +EAK+++ WGRGKVQKE+++ + ELE+I PFAR D +LE ARK EIRADDPMAAYM +K+ A+E +SGK LKPEYKGP PKPNRF IRPGYRWDG DRGNG+E+R + + K E W +D+ Sbjct: 377 DASPPRRGGRRDSSSRAEEEGGGGGGKRRRRHD----SPEEDG---KAGGDGR----------VKTSSGYYA-------GLQSGKDFKVVEQNLKRKHDAEMKG-----ADKSSSGQGAETVYRDKKGRKLDMLNEFMKSQDARAGKKVEEAKDQFAWGRGKVQKEEEKQWKEELENIAAEPFARTVDDTRLEEARKAEIRADDPMAAYMAKKK----AKEGVKSGKPLKPEYKGPQPKPNRFGIRPGYRWDGNDRGNGWESRIVAKGVDNNYKAELAYKWATADM 629
BLAST of EWM24211.1 vs. NCBI_GenBank
Match: gi|673014784|ref|XP_008861353.1| (hypothetical protein H310_00366 [Aphanomyces invadans] >gi|574482951|gb|ETW09942.1| hypothetical protein H310_00366 [Aphanomyces invadans]) HSP 1 Score: 167.162 bits (422), Expect = 1.034e-42 Identity = 111/284 (39.08%), Postives = 155/284 (54.58%), Query Frame = 0 Query: 100 SPPRRRRRHD-SPSPLRR----RRRHDT---PSPSPTRDG-DPPKRGGQGTRDDRGAVAVAVVSESGKTASTRPKEDGLKTGAEFRAE---LEAQKDAEAHAWAEGAKDAGVTGQHAETVVRDRRGRKLEMLSEFLNQEAYKEGKAAKEAKEEYEWGRGKVQKEKDEDHRRELEDIKNAPFARYESDLKLERARKEEIRADDPMAAYMLQKQRDALAQEATRSGKVLKPEYKGPPPKPNRFNIRPGYRWDGIDRGNGFEARWFKRQSELVTKHERDRAWGMSDL 371 +PPRRR R D +PS R+ RR H T SP P+R PP+ R A S +T + G+ TG EF+A+ L A + A H D + G+ AETV RD+RGRKL+ML E Q+ +EGK +EAKEE+EWG GKV+KE+ + + ELE I+ PFAR+ D +LE+ RK++ R DPM + + + + D + + K KP+Y GPP PNRFNI PGYRWDG+ RGN +E + + + + W +D+ Sbjct: 362 TPPRRRSRFDKAPSSSRKESPPRRSHGTKSSTSPPPSRQAASPPRVKSTANTSRRDDDAAQASSPHRQTVPDQSALGGVFTGKEFKAQQDQLRASQQAAFH-------DEELMGKQAETVYRDKRGRKLDMLMEMQRQQEIQEGKRKREAKEEFEWGTGKVRKEELKSQQNELEAIRAKPFARHNDDAELEKLRKDKQRDFDPMQSSLFKDELDEKVKRVPK--KNEKPKYSGPPAPPNRFNIPPGYRWDGVVRGNNWEEKALLKVNARKALKQDMYQWATADM 636
BLAST of EWM24211.1 vs. NCBI_GenBank
Match: gi|971514597|dbj|GAQ83584.1| (hypothetical protein KFL_001540020 [Klebsormidium nitens]) HSP 1 Score: 157.532 bits (397), Expect = 1.133e-39 Identity = 137/381 (35.96%), Postives = 192/381 (50.39%), Query Frame = 0 Query: 12 GAQDLSPPRRPRSAGPQGDVSPPRRTRPERLPGTDASSPRRPRR-RSPSVSPFDPSCRSNTTSGEPSRPHQPRPSPSPSR----DPGPEGGDISPPRRRRRHDSP--SPLRRRRRHDTPSPSPTRDGDPPKRGGQGTRDDRGAVAVAVVSESGKTASTRPKEDGLKTGAEFRAELEAQKDAEAHAWAEGAKDAGVTGQHAETVVRDRRGRKLEMLSEFLNQEAYKEGKAAKEAKEEYEWGRGKVQKEKDEDHRRELEDIKNAPFARYESDLKLERARKEEIRADDPMAAYMLQK---QRDALAQ---EATRSGKVLKPE--------YKGPPPKPNRFNIRPGYRWDGIDRGNGFEARWFKRQSELVTKHERDRAWGMSDL 371 G+ DLSPPR+ R A P D+SPPR+ R + D S PR+ RR +P +SP + +++ S P R Q P SP R P P D+SPPR+R HDSP SP RR+ RHD+P P R+ P G + R G +A GL+TG + + E+EA++ +A ++ A DA VTG+ A TV RD+ GR++ +E L +A E K KE + EWG+G QK ED REL+D++N PFAR D L+ K R DPMA + K + D + Q + ++ + P+ +G P NRF IRPG WDG+DR GFE K + + W ++D+ Sbjct: 197 GSPDLSPPRKGRPASP--DLSPPRKARHD---SPDLSPPRKSRRDVAPDLSPPRKARQASPDSSPPRRRRQDSPDLSPPRRARHAPSPHQQDLSPPRKRH-HDSPDLSPPRRKARHDSPEGPPPRNASNPSGGEKPARMTDGTLA------------------GLRTGKDLQREIEAKRAQDAKKFS--ALDAAVTGRGAGTVYRDKTGRRV--TAEELKAQAEAEAKKRKE-EPPPEWGKGMAQKRAAEDKARELDDMRNKPFARTRDDKDLDNMLKSRSRWGDPMAHLVKNKGPSEADLVGQLDMDDLKAQGFIVPQDIPPHSWLKRGLAPPYNRFGIRPGRHWDGVDRSTGFEKELVKASNAKQARANEAYLWSVADM 548
BLAST of EWM24211.1 vs. NCBI_GenBank
Match: gi|167526062|ref|XP_001747365.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163774200|gb|EDQ87832.1| predicted protein [Monosiga brevicollis MX1]) HSP 1 Score: 156.762 bits (395), Expect = 2.062e-39 Identity = 130/359 (36.21%), Postives = 175/359 (48.75%), Query Frame = 0 Query: 24 SAGPQGDVSPPRRTRPERLPGTDASSPRRPRRRSPSVSPFDPSCRSNTTSGEPSRPHQPRPSPSPSRDPGPEGGDISPPRRRRRHDSP--SPLRRRRRHDTPSPSPTRDGDPPKRGGQGTRDD---------RGAVAVAVVSESGKTASTRPKEDGLKTGAEFRAELEAQKDAEAHAWAEGAKDAGVTGQHAETVVRDRRGRKLEMLSEFLNQEAYKEGKAAKEAKEEYEWGRGKVQKEKDEDHRRELEDIKNAPFARYESDLKLERARKEEIRADDPMAAYMLQKQRDALAQEATRSGKVLKPEYKGPPPKPNRFNIRPGYRWDGIDRGNGFEARWFKRQSELVTKHERDRAWGMSDL 371 SA D SPPRR R + DAS PRR R SP SP P R P SP R + D SPPR R+RHDSP SP RR+R T + P R KR T R A + ++ A GL+ A R +LE + AE + D+ GQ ETV RD+ GR+L+ E L + ++ + E +E+ EWGRG Q +D R E+E + P AR +D L + +++EIRA+DPMAAY+++++ A SGK +P Y+GPP PNRF I PG+RWDG DR NGFE RWF+ ++ + W + D+ Sbjct: 232 SAASTADASPPRRQRHD---SPDASPPRRQRHDSPDASP-------------PRRQRHDSPDASPPRRQRHDSPDASPPR-RQRHDSPDASPPRRQRTGGTDASPPRRSRTASKRSASLTDQSHEDASPPRRRAANTSDIEAQLQNLA-------GLQNAAALRQDLELRAAAEQRML-DALGDSAGHGQ--ETVHRDKSGRRLDPKLERLRKREMEQKREELE-QEQMEWGRGLKQTRDAQDRRAEIEHEMSKPLARSRNDEDLNKMQRDEIRAEDPMAAYIMKQREQA-------SGKPSRPRYRGPPAPPNRFGIEPGHRWDGRDRSNGFEQRWFQTRARGAAVGKDAYKWSVEDM 555
BLAST of EWM24211.1 vs. NCBI_GenBank
Match: gi|813119431|ref|XP_012196263.1| (hypothetical protein SPRG_19382 [Saprolegnia parasitica CBS 223.65] >gi|641539320|gb|KDO33129.1| hypothetical protein SPRG_19382 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 145.976 bits (367), Expect = 1.579e-38 Identity = 86/187 (45.99%), Postives = 117/187 (62.57%), Query Frame = 0 Query: 168 GLKTGAEFRAELEAQKDAEAHAWAEGAKDAGVTGQHAETVVRDRRGRKLEMLSEFLNQEAYKEGKAAKEAKEEYEWGRGKVQKEKDEDHRRELEDIKNAPFARYESDLKLERARKEEIRADDPMAAYMLQKQRDALAQEATRSGKVLKPEYKGPPPKPNRFNIRPGYRWDGIDRGNGFEARWFKRQS 354 G+ TG EFR E E + + + +D + G+ AETV RD+RGRKL+ML E Q +EGK +EA EEYEWG GKV+KE+ ++ R +LE+IK PFARY+ D +L+ A K R DPM + + + L ++A++ K KP Y GP PNRFNI PGYRWDG+ RGN +E + RQ+ Sbjct: 7 GVFTGKEFRQESERARKQQGALF----EDEALMGKQAETVYRDKRGRKLDMLMEMERQREIQEGKRKREALEEYEWGTGKVRKEELKNQREQLEEIKAKPFARYKDDGELDAALKHRPRNFDPMESSLFKDDAKELLEKASKKSKKSKPRYSGPSAPPNRFNIPPGYRWDGVVRGNNWEEKVLLRQN 189
BLAST of EWM24211.1 vs. NCBI_GenBank
Match: gi|302770821|ref|XP_002968829.1| (hypothetical protein SELMODRAFT_146054 [Selaginella moellendorffii] >gi|300163334|gb|EFJ29945.1| hypothetical protein SELMODRAFT_146054 [Selaginella moellendorffii]) HSP 1 Score: 154.066 bits (388), Expect = 2.975e-38 Identity = 145/387 (37.47%), Postives = 194/387 (50.13%), Query Frame = 0 Query: 13 AQDLSPPRRPRSAGPQGDVSPPRRTRPERLPGTDASSPRRPRRRSPSVSPFDPSCRSNTTSGEPSRP-HQPRPSPSPSR---DPGP----EGGDISPPRRRRRHDSPSPLRRRRRHDTPSPSP-----TRDGDPPKRGGQGT----RDDRG---------AVAVAVVSESGKT--ASTRPKEDGLKTGAEFRAELEAQKDAEAHAWAEGAKDAGVTGQHAETVVRDRRGRKLEMLSEFLNQEAYKEGKAAKEAKEEYEWGRGKVQKEKDEDHRRELEDIKNAPFARYESDLKLERARKEEIRADDPMAAYMLQKQRDALAQEATRSGKVLKPEYKGPPPKPNRFNIRPGYRWDGIDRGNGFEARWFKRQSELVTKHERDRAWGMSDL 371 +DLSPPRR ++ G D+SPPRR + TD PRRRS S D S R +G+ S P H+PR SP R D P G D+SPPRR+ SP RRR+R DT SP RD PP+R G G R RG + + G+ AS + K GLKTG+E R E+ ++ +A + + D+ +TG+ AETV RD+ GR+L L E + Q+ AKE ++ EWG G QK + E R E+E K+ PFAR + DL + K +R DPMA L KQ D + +G PNR+NIRPG WDG+DR NGFE + FK+Q+E + W ++D+ Sbjct: 214 TEDLSPPRRSKAGG--DDLSPPRRRQ-----RTDTEDLSPPRRRSGS----DLSPRRKAGAGDLSPPRHRPRTDTSPPRRREDLSPPRRRSGSDLSPPRRKAGGSDLSPPRRRQRTDTEDLSPPRRKSGRDLSPPRRKGGGGDLSPRRSRGEDLSPPHRRSTSDLSPPRRGRVDDASDKAKA-GLKTGSELRHEITEKQSQDARRFKQ--LDSTLTGRGAETVYRDKHGRRLAGLEELMKQQK----GPAKEPEKPLEWGTGLAQKREAEKRREEIEAEKDKPFARSKDDL--DAIYKNRVRWGDPMA--HLVKQTDESGFNVPQGVPAHSWLKRGHAATPNRYNIRPGRHWDGVDRSNGFEEKLFKQQNEKKAMVDTAYLWSVADM 578
BLAST of EWM24211.1 vs. NCBI_GenBank
Match: gi|669153724|ref|XP_008612424.1| (hypothetical protein SDRG_08321 [Saprolegnia diclina VS20] >gi|530735870|gb|EQC34112.1| hypothetical protein SDRG_08321 [Saprolegnia diclina VS20]) HSP 1 Score: 153.68 bits (387), Expect = 4.852e-38 Identity = 85/187 (45.45%), Postives = 115/187 (61.50%), Query Frame = 0 Query: 168 GLKTGAEFRAELEAQKDAEAHAWAEGAKDAGVTGQHAETVVRDRRGRKLEMLSEFLNQEAYKEGKAAKEAKEEYEWGRGKVQKEKDEDHRRELEDIKNAPFARYESDLKLERARKEEIRADDPMAAYMLQKQRDALAQEATRSGKVLKPEYKGPPPKPNRFNIRPGYRWDGIDRGNGFEARWFKRQS 354 G+ TG EFR E E + + + +D + G+ AETV RD+RGRKL+ML E Q EGK +EA EEYEWG GKV+KE+ ++ R +LE+IK PFARY+ D +L+ A K R DPM + + + L ++ ++ K KP Y GP PNRFNI PGYRWDG+ RGN +E + RQ+ Sbjct: 386 GVFTGKEFRQESERARKQQGALF----EDEALMGKQAETVYRDKRGRKLDMLMEMERQREIHEGKRKREALEEYEWGTGKVRKEELKNQREQLEEIKAKPFARYKDDGELDAALKHRPRNFDPMESSLFKDDAKELLEKTSKKSKKSKPRYSGPSAPPNRFNIPPGYRWDGVVRGNNWEEKVLLRQN 568
BLAST of EWM24211.1 vs. NCBI_GenBank
Match: gi|196010169|ref|XP_002114949.1| (hypothetical protein TRIADDRAFT_28663 [Trichoplax adhaerens] >gi|190582332|gb|EDV22405.1| hypothetical protein TRIADDRAFT_28663 [Trichoplax adhaerens]) HSP 1 Score: 152.14 bits (383), Expect = 1.233e-37 Identity = 138/373 (37.00%), Postives = 187/373 (50.13%), Query Frame = 0 Query: 13 AQDLSPPRRPRSAGPQGDVSPPRRTRPERLPGTDASSPRRPRRRSPSVSPFDPSCRSNTTSGEPSRPHQPRPSPS---PSRDPGPEGGDISPPRRRRRHDSP--SPLRRRRRHDTPSPSPTR--------DGDPPKRGGQGTRDDRGAVAVAVVSESGKTASTRPKEDGLKTGAEFRAELEAQKDAEAHAWAEGAKDAGVTGQHAETVVRDRRGRKLEMLSEFLNQEAYKEGKAAKEAKEEYEWGRGKVQKEKDEDHRRELEDIKNAPFARYESDLKLERARKEEIRADDPMAAYMLQKQRDALAQEATRSGKVL-KPEYKGPPPKPNRFNIRPGYRWDGIDRGNGFEARWFKRQSELVTKHERDRAWGMSDL 371 A DLSPPRR R D+SPPRR R D S R+ R SP +SP R ++ P R SP P R + D+SPPRRR RHDSP S RRR RHD+P S R D PP+R + A + +++ K T K+ GL++ + E E ++ E + E DA V+G+ A+T RD+ G+ ++ E L Q + K +E ++ EWG+G QK+ E+ + N PFARY D L++ ++E R DPM Y+ +K+ L GK+ KP+YKGP P PNRFNI PGYRWDG+DR NGFE R FK +E + W D+ Sbjct: 204 APDLSPPRR-RGRHDSPDLSPPRRQ--GRHDSPDLSPRRKGRHDSPDLSPPRRKQRQDSPDLSPPRRKGRHDSPDLTPPRRRGRHDSPDLSPPRRRGRHDSPDLSRPRRRGRHDSPDLSSPRRKAGRDSPDLSPPRR--------KNADRKSKMNQDSKPTIT--KKAGLQSATVLKEENEFRRKLEDKQFDE--MDATVSGKGAKTTYRDKHGKIRDIKKERL-QMREERRKREEEEEKFMEWGKGMTQKKLAEEKLADAAHEINKPFARYADDADLDQQQREAERDGDPMLDYIKKKKNKRLG------GKIKEKPKYKGPLPPPNRFNIMPGYRWDGVDRSNGFEGRRFKIINEKKSLQHEAYKWSTEDM 554 The following BLAST results are available for this feature:
BLAST of EWM24211.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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