EWM24206.1, cds6464 (CDS) Nannochloropsis gaditana

Overview
NameEWM24206.1
Unique Namecds6464
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:603275..605143 -

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Properties
Property NameValue
Protein idEWM24206.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100217g7.6975.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:603275..605143 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM24206.1 vs. NCBI_GenBank
Match: gi|585105595|gb|EWM24206.1| (hypothetical protein Naga_100217g7 [Nannochloropsis gaditana])

HSP 1 Score: 1277.31 bits (3304), Expect = 0.000e+0
Identity = 622/622 (100.00%), Postives = 622/622 (100.00%), Query Frame = 0 
Query:    1 MYPPPPRRTLFGQALFQPLDDKRSISRSIRRDIVVHTCIVRCSTCISYPLVCDGITWTHAAFQIHLPHPLPSPSQSRLTRFIPHYSIFHDCSTALGQPTALGRLLAAPPIAARIRMHAVKAVAGAAVDPHTWEPVRQSSTSSLYSSNSGSSSSIASLYGGGENMQGGEKTTLLIESGLDVSMSLDLLRHASGAPAAGPQDSSQPTVLVVLSARPELSETLDVIAGRSGSVFVIGLQKELYGTPLSQFVTGGITLDGLLVSAAEALLWHRRRCRQHLQQRQLQQQQRRQSLSPRADFCPHGPACDYLRGTAAYMSGGASKYNPLDGTIRTCAHWKEVNQSHRSSPAGGSGGGSGQTSPRPFSKSKLDHLTAFQHTCGAGRTCRNGGPYHQMAFPHVSSITSSCSSSSCGHSKGMGVNHGNFREACTKRESPAERQASYTSHDECDRRHVCNHSSERGNRGDFTGQVGGGPFRPAMASAAPCDRSAAITSVTELPEGRGKGATREDDGWLEEAVRKDFYGEEGEASQVTADEEEDEETAAVVGLRGCLPSVSKRSSNWGRAKQGEIGKPVWWQRLRRSHKDDEEEDGGEDGGGRLEEMAELEPGRDHRGEGDEERDAVLFPMSL 622
            MYPPPPRRTLFGQALFQPLDDKRSISRSIRRDIVVHTCIVRCSTCISYPLVCDGITWTHAAFQIHLPHPLPSPSQSRLTRFIPHYSIFHDCSTALGQPTALGRLLAAPPIAARIRMHAVKAVAGAAVDPHTWEPVRQSSTSSLYSSNSGSSSSIASLYGGGENMQGGEKTTLLIESGLDVSMSLDLLRHASGAPAAGPQDSSQPTVLVVLSARPELSETLDVIAGRSGSVFVIGLQKELYGTPLSQFVTGGITLDGLLVSAAEALLWHRRRCRQHLQQRQLQQQQRRQSLSPRADFCPHGPACDYLRGTAAYMSGGASKYNPLDGTIRTCAHWKEVNQSHRSSPAGGSGGGSGQTSPRPFSKSKLDHLTAFQHTCGAGRTCRNGGPYHQMAFPHVSSITSSCSSSSCGHSKGMGVNHGNFREACTKRESPAERQASYTSHDECDRRHVCNHSSERGNRGDFTGQVGGGPFRPAMASAAPCDRSAAITSVTELPEGRGKGATREDDGWLEEAVRKDFYGEEGEASQVTADEEEDEETAAVVGLRGCLPSVSKRSSNWGRAKQGEIGKPVWWQRLRRSHKDDEEEDGGEDGGGRLEEMAELEPGRDHRGEGDEERDAVLFPMSL
Sbjct:    1 MYPPPPRRTLFGQALFQPLDDKRSISRSIRRDIVVHTCIVRCSTCISYPLVCDGITWTHAAFQIHLPHPLPSPSQSRLTRFIPHYSIFHDCSTALGQPTALGRLLAAPPIAARIRMHAVKAVAGAAVDPHTWEPVRQSSTSSLYSSNSGSSSSIASLYGGGENMQGGEKTTLLIESGLDVSMSLDLLRHASGAPAAGPQDSSQPTVLVVLSARPELSETLDVIAGRSGSVFVIGLQKELYGTPLSQFVTGGITLDGLLVSAAEALLWHRRRCRQHLQQRQLQQQQRRQSLSPRADFCPHGPACDYLRGTAAYMSGGASKYNPLDGTIRTCAHWKEVNQSHRSSPAGGSGGGSGQTSPRPFSKSKLDHLTAFQHTCGAGRTCRNGGPYHQMAFPHVSSITSSCSSSSCGHSKGMGVNHGNFREACTKRESPAERQASYTSHDECDRRHVCNHSSERGNRGDFTGQVGGGPFRPAMASAAPCDRSAAITSVTELPEGRGKGATREDDGWLEEAVRKDFYGEEGEASQVTADEEEDEETAAVVGLRGCLPSVSKRSSNWGRAKQGEIGKPVWWQRLRRSHKDDEEEDGGEDGGGRLEEMAELEPGRDHRGEGDEERDAVLFPMSL 622
[Close]
BLAST of EWM24206.1 vs. NCBI_GenBank
Match: gi|585105594|gb|EWM24205.1| (hypothetical protein Naga_100217g7 [Nannochloropsis gaditana])

HSP 1 Score: 1098.58 bits (2840), Expect = 0.000e+0
Identity = 547/583 (93.83%), Postives = 550/583 (94.34%), Query Frame = 0 
Query:   50 LVCDGITWTHAAFQIHLP----HPLPSPSQSRLTRFIPHY------SIFHDCSTALGQPTALGRLLAAPPIAARIRMHAVKAVAGAAVDPHTWEPVRQSSTSSLYSSNSGSSSSIASLYGGGENMQGGEKTTLLIESGLDVSMSLDLLRHASGAPAAGPQDSSQPTVLVVLSARPELSETLDVIAGRSGSVFVIGLQKELYGTPLSQFVTGGITLDGLLVSAAEALLWHRRRCRQHLQQRQLQQQQRRQSLSPRADFCPHGPACDYLRGTAAYMSGGASKYNPLDGTIRTCAHWKEVNQSHRSSPAGGSGGGSGQTSPRPFSKSKLDHLTAFQHTCGAGRTCRNGGPYHQMAFPHVSSITSSCSSSSCGHSKGMGVNHGNFREACTKRESPAERQASYTSHDECDRRHVCNHSSERGNRGDFTGQVGGGPFRPAMASAAPCDRSAAITSVTELPEGRGKGATREDDGWLEEAVRKDFYGEEGEASQVTADEEEDEETAAVVGLRGCLPSVSKRSSNWGRAKQGEIGKPVWWQRLRRSHKDDEEEDGGEDGGGRLEEMAELEPGRDHRGEGDEERDAVLFPMSL 622
            LV DG    H A   + P      LP   Q  +      +      SIFHDCSTALGQPTALGRLLAAPPIAARIRMHAVKAVAGAAVDPHTWEPVRQSSTSSLYSSNSGSSSSIASLYGGGENMQGGEKTTLLIESGLDVSMSLDLLRHASGAPAAGPQDSSQPTVLVVLSARPELSETLDVIAGRSGSVFVIGLQKELYGTPLSQFVTGGITLDGLLVSAAEALLWHRRRCRQHLQQRQLQQQQRRQSLSPRADFCPHGPACDYLRGTAAYMSGGASKYNPLDGTIRTCAHWKEVNQSHRSSPAGGSGGGSGQTSPRPFSKSKLDHLTAFQHTCGAGRTCRNGGPYHQMAFPHVSSITSSCSSSSCGHSKGMGVNHGNFREACTKRESPAERQASYTSHDECDRRHVCNHSSERGNRGDFTGQVGGGPFRPAMASAAPCDRSAAITSVTELPEGRGKGATREDDGWLEEAVRKDFYGEEGEASQVTADEEEDEETAAVVGLRGCLPSVSKRSSNWGRAKQGEIGKPVWWQRLRRSHKDDEEEDGGEDGGGRLEEMAELEPGRDHRGEGDEERDAVLFPMSL
Sbjct:   56 LVMDG-PHLHKALDAYFPGLTQDELPVVVQGLMASLESEFRVTFSKSIFHDCSTALGQPTALGRLLAAPPIAARIRMHAVKAVAGAAVDPHTWEPVRQSSTSSLYSSNSGSSSSIASLYGGGENMQGGEKTTLLIESGLDVSMSLDLLRHASGAPAAGPQDSSQPTVLVVLSARPELSETLDVIAGRSGSVFVIGLQKELYGTPLSQFVTGGITLDGLLVSAAEALLWHRRRCRQHLQQRQLQQQQRRQSLSPRADFCPHGPACDYLRGTAAYMSGGASKYNPLDGTIRTCAHWKEVNQSHRSSPAGGSGGGSGQTSPRPFSKSKLDHLTAFQHTCGAGRTCRNGGPYHQMAFPHVSSITSSCSSSSCGHSKGMGVNHGNFREACTKRESPAERQASYTSHDECDRRHVCNHSSERGNRGDFTGQVGGGPFRPAMASAAPCDRSAAITSVTELPEGRGKGATREDDGWLEEAVRKDFYGEEGEASQVTADEEEDEETAAVVGLRGCLPSVSKRSSNWGRAKQGEIGKPVWWQRLRRSHKDDEEEDGGEDGGGRLEEMAELEPGRDHRGEGDEERDAVLFPMSL 637
The following BLAST results are available for this feature:
BLAST of EWM24206.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585105595|gb|EWM24206.1|0.000e+0100.00hypothetical protein Naga_100217g7 [Nannochloropsi... [more]
gi|585105594|gb|EWM24205.1|0.000e+093.83hypothetical protein Naga_100217g7 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6480rna6480Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications