EWM24209.1, cds6462 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24209.1 vs. NCBI_GenBank
Match: gi|585105598|gb|EWM24209.1| (elmo domain-containing protein a [Nannochloropsis gaditana]) HSP 1 Score: 900.197 bits (2325), Expect = 0.000e+0 Identity = 446/446 (100.00%), Postives = 446/446 (100.00%), Query Frame = 0 Query: 1 MVAPVLVAYEFIGPADAPETGFSSSFELFASDSPTDVLTVLALREAFPYVGDFHFRAKIPFQETQYAWLDLTEEDTPLPLLTEESDQPVVAIRVLPLAFEDEDEDRQGKNGGELDFSGPDLDQDIVESCVLGEGGGSRGGGGDALGVGGGRDASFSSPGGSYGNWAHQLKGVGESVITSDVARDLTKKGLKVGKQVGKQVNKLWRLVGEGLGGGERGEGGAGDRREGRSLVPEGPSPSSVRYLRRWEDALVTPPDAETLLALWKALFPGAASRDEGARARSRQWRRAGCEEEDPLREFRGTGSMCVRCLTYFARTYPEKTQDILERYEAGKKEGCGNQEMYPLIGVSNSLILIMVDIFKLRDARYVHVQSTMWNLFEGGGYGTMEEVFSAALAYLDRRWMETEASIEGFSTLARETRRALEGVLGQGPLNLPHFQALAQDAGLGWR 446 MVAPVLVAYEFIGPADAPETGFSSSFELFASDSPTDVLTVLALREAFPYVGDFHFRAKIPFQETQYAWLDLTEEDTPLPLLTEESDQPVVAIRVLPLAFEDEDEDRQGKNGGELDFSGPDLDQDIVESCVLGEGGGSRGGGGDALGVGGGRDASFSSPGGSYGNWAHQLKGVGESVITSDVARDLTKKGLKVGKQVGKQVNKLWRLVGEGLGGGERGEGGAGDRREGRSLVPEGPSPSSVRYLRRWEDALVTPPDAETLLALWKALFPGAASRDEGARARSRQWRRAGCEEEDPLREFRGTGSMCVRCLTYFARTYPEKTQDILERYEAGKKEGCGNQEMYPLIGVSNSLILIMVDIFKLRDARYVHVQSTMWNLFEGGGYGTMEEVFSAALAYLDRRWMETEASIEGFSTLARETRRALEGVLGQGPLNLPHFQALAQDAGLGWR Sbjct: 1 MVAPVLVAYEFIGPADAPETGFSSSFELFASDSPTDVLTVLALREAFPYVGDFHFRAKIPFQETQYAWLDLTEEDTPLPLLTEESDQPVVAIRVLPLAFEDEDEDRQGKNGGELDFSGPDLDQDIVESCVLGEGGGSRGGGGDALGVGGGRDASFSSPGGSYGNWAHQLKGVGESVITSDVARDLTKKGLKVGKQVGKQVNKLWRLVGEGLGGGERGEGGAGDRREGRSLVPEGPSPSSVRYLRRWEDALVTPPDAETLLALWKALFPGAASRDEGARARSRQWRRAGCEEEDPLREFRGTGSMCVRCLTYFARTYPEKTQDILERYEAGKKEGCGNQEMYPLIGVSNSLILIMVDIFKLRDARYVHVQSTMWNLFEGGGYGTMEEVFSAALAYLDRRWMETEASIEGFSTLARETRRALEGVLGQGPLNLPHFQALAQDAGLGWR 446
BLAST of EWM24209.1 vs. NCBI_GenBank
Match: gi|299469681|emb|CBN76535.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 104.76 bits (260), Expect = 1.356e-20 Identity = 70/268 (26.12%), Postives = 116/268 (43.28%), Query Frame = 0 Query: 182 ARDLTKKGLKVGKQVGKQVNKLWRLVGEGLGGGERGEGGAGDRREGRSLVPEGPSPSSVRYLRRWEDALVTPPDAET------LLALWKALFPGAASRDEGARARSRQWRRAGCEEEDPLREFRGTGSMCVRCLTYFARTYPEKTQDILERYEAGKKEGCGNQEMYPLIGVSNSLILIMVDIFKLRDARYVHVQSTMWNLFEGGGYGTMEEVFSAALAYLDRRWMETEASIEGFSTLARETRRALEGVLGQGPLNLPHFQALAQDAGL 443 +D KK +V K +G K+W + +G+GG P PS ++ L + L TP A + L +W LFP DE A S +W+ AG +E + +FRGTG + ++ + +F + Y K + + + G YP V+N+L L++ D+ ++R ++ + W +F+ G E+F A LD W E A F + T+ + +L P NLP F A++ G+ Sbjct: 289 VKDFQKKTSQVAKTMGFGAKKMWNAINKGVGG------------------PVVPSEEAMENLHELANFLGTPFSATSREHVNDLGKVWMCLFPD----DEFEGAESPRWQEAGFQESNVSLDFRGTGVLALKSMVFFCQEYDRKALSLC------RAQSAGGSSHYPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFD--RRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAFMGQAEEMGM 526 HSP 2 Score: 65.855 bits (159), Expect = 5.855e-8 Identity = 41/112 (36.61%), Postives = 55/112 (49.11%), Query Frame = 0 Query: 1 MVAPVLVAYEFIGPADAPETGFSSSFELFASDSPTDVLTVLALREAFPYVGDFHFRAKIPFQE--TQYAWLDLTEEDTPLPLLTEE-----------SDQPVVAIRVLPLAF 99 M + VLV Y G D PETG SSF + +P LT+ LRE FP+ G FHFR K+P + Y W+DLT + + L E Q V +++LP+ F Sbjct: 1 MSSSVLVCYVIQGDDDDPETGVQSSFRV-DRPTPPRTLTLFRLREMFPFEGTFHFRLKVPDANGLSDYCWVDLTTDGDDILELAENLGGLEGGNSGGHPQQRVHLKILPIDF 111
BLAST of EWM24209.1 vs. NCBI_GenBank
Match: gi|1026092324|ref|XP_016545344.1| (PREDICTED: ELMO domain-containing protein A isoform X4 [Capsicum annuum]) HSP 1 Score: 83.1889 bits (204), Expect = 2.073e-14 Identity = 61/192 (31.77%), Postives = 95/192 (49.48%), Query Frame = 0 Query: 253 PPDAETLLALWKALFPGAASRDEGARARSRQWRRAGCEEEDPLREFRGTGSMCVRCLTYFARTYPEKTQDILERYEAGKKEGCGNQEMYP--LIGVSNSLILI-MVDIFKLRDARYVHVQSTMWNLFEGGGYGTMEEVFSAALAYLDRRWMETEASIEGFSTLARETRRALEGVLGQGPL----NLPHFQAL 437 P E L ALWKA FP +E S QW+ G + +DP +FRG G + + L YFAR +P QD+L+ K+EG YP + GV+ + +LI M+DI ++ V + F G + ++ +D++W+ AS F+T+ + TRR +E L QG + +LP ++ L Sbjct: 85 PEHREALRALWKAAFPV----EELHGLISEQWKEMGWQGKDPSTDFRGAGFISLENLLYFARNFPRSFQDLLQ-----KQEGDRALWEYPFAVAGVNITFMLIQMLDIGAIKPRNLV---GATFLKFLAGNESAFDLLYCITFKLMDQQWLAMHASYMDFNTVMKSTRRRIERELLQGNIKRLEDLPSYRLL 264
BLAST of EWM24209.1 vs. NCBI_GenBank
Match: gi|1109273668|ref|XP_019160984.1| (PREDICTED: ELMO domain-containing protein A-like isoform X2 [Ipomoea nil] >gi|1109273670|ref|XP_019160985.1| PREDICTED: ELMO domain-containing protein A-like isoform X2 [Ipomoea nil]) HSP 1 Score: 83.1889 bits (204), Expect = 2.657e-14 Identity = 54/209 (25.84%), Postives = 97/209 (46.41%), Query Frame = 0 Query: 221 AGDRREGRSLVPEGPSPSSVRYLRRWEDALVTPPDA------ETLLALWKALFPGAASRDEGARARSRQWRRAGCEEEDPLREFRGTGSMCVRCLTYFARTYPEKTQDILERYEAGKKEGCGNQEM--YPLIGVSNSLILIMVDIFKLRDARYVHVQSTMWNLFEGGGYGTMEEVFSAALAYLDRRWMETEASIEGFSTLARETRRALE 421 RR G + + +P+ L+R + + D+ E L+ LW A FPG +E S QW+ G + +DP +FRG G + + L YFAR++P+ QD+L + E GN+ + YP ++ +++ + L + ++ + F + ++ A +D++W+ AS F+T+ + TRR LE Sbjct: 46 CAQRRVGDARLIFDLTPTQKECLQRLHNRIDIAYDSSIHEHQEALMDLWNAAFPG----EELCGLISEQWKEMGWQGKDPSTDFRGCGLLSLENLLYFARSFPKSFQDLLHKLE-------GNRAIWEYPFAVAGVNITFMLIQMLDLESIKPRNLVGATFLKFLAENESAFDLLYCIAFKLMDQQWLAMRASYMDFNTVIKATRRQLE 243
BLAST of EWM24209.1 vs. NCBI_GenBank
Match: gi|1191673805|gb|OTG25770.1| (putative ELMO/CED-12 family protein [Helianthus annuus]) HSP 1 Score: 82.8037 bits (203), Expect = 3.236e-14 Identity = 68/228 (29.82%), Postives = 106/228 (46.49%), Query Frame = 0 Query: 225 REGRSLVPEGPSPSSVRYLRRWEDAL------VTPPDAETLLALWKALFPGAASRDEGARARSRQWRRAGCEEEDPLREFRGTGSMCVRCLTYFARTYPEKTQDILERYEAGKKEGCGNQEMYP--LIGVSNSLILI-MVDIFKLRDARYVHVQSTMWNLFEGGGYGTMEEVFSAALAYLDRRWMETEASIEGFSTLARETRRALEGVLGQGPLN----LPHFQALAQ 439 REG S +P+ L+R + L P E L ALWKA FP RD S QW+ G + +DP +FRG G + + L YFAR +P+ QD+L K+EG YP + GV+ + +LI M+D+ ++ +V +T L + ++ +D +W++ AS F+ + + TRR LE L Q + LP + L++ Sbjct: 51 REGDSRPSFDLTPAQEHCLQRLQTRLDIAYDGSIPEHQEALRALWKAAFPEEELRD----IISEQWKEMGWQGKDPSTDFRGGGFISLENLLYFARNFPKSFQDLLR-----KQEGVRAMWEYPFAVAGVNITFMLIQMLDLEAVKPQSFVG--ATFLKLL-SENESAFDLLYCITFKLMDHQWLDMHASYMDFNAVMKSTRRQLERELLQEDITRLEELPSYNLLSR 266
BLAST of EWM24209.1 vs. NCBI_GenBank
Match: gi|1026092318|ref|XP_016545341.1| (PREDICTED: ELMO domain-containing protein A isoform X1 [Capsicum annuum]) HSP 1 Score: 83.1889 bits (204), Expect = 3.240e-14 Identity = 61/192 (31.77%), Postives = 95/192 (49.48%), Query Frame = 0 Query: 253 PPDAETLLALWKALFPGAASRDEGARARSRQWRRAGCEEEDPLREFRGTGSMCVRCLTYFARTYPEKTQDILERYEAGKKEGCGNQEMYP--LIGVSNSLILI-MVDIFKLRDARYVHVQSTMWNLFEGGGYGTMEEVFSAALAYLDRRWMETEASIEGFSTLARETRRALEGVLGQGPL----NLPHFQAL 437 P E L ALWKA FP +E S QW+ G + +DP +FRG G + + L YFAR +P QD+L+ K+EG YP + GV+ + +LI M+DI ++ V + F G + ++ +D++W+ AS F+T+ + TRR +E L QG + +LP ++ L Sbjct: 96 PEHREALRALWKAAFPV----EELHGLISEQWKEMGWQGKDPSTDFRGAGFISLENLLYFARNFPRSFQDLLQ-----KQEGDRALWEYPFAVAGVNITFMLIQMLDIGAIKPRNLV---GATFLKFLAGNESAFDLLYCITFKLMDQQWLAMHASYMDFNTVMKSTRRRIERELLQGNIKRLEDLPSYRLL 275
BLAST of EWM24209.1 vs. NCBI_GenBank
Match: gi|661887016|emb|CDP09425.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 82.4185 bits (202), Expect = 5.001e-14 Identity = 59/229 (25.76%), Postives = 103/229 (44.98%), Query Frame = 0 Query: 221 AGDRREGRSLVPEGPSPSSVRYLRRWEDALVTPPDA------ETLLALWKALFPGAASRDEGARARSRQWRRAGCEEEDPLREFRGTGSMCVRCLTYFARTYPEKTQDILERYEAGKKEGCGNQEMYPLIGVSNSLILIMVDIFKLRDARYVHVQSTMWNLFEGGGYGTMEEVFSAALAYLDRRWMETEASIEGFSTLARETRRALEGVLGQGPL----NLPHFQALAQ 439 RRE + +P+ L+R ++ + P D+ E L ALW A FPG ++ S QW+ G + +DP +FRG G + + L YFAR +P+ QD+L K+EG YP ++ +++ + L + + + F + ++ +D +W+ AS F+T+ + TRR LE L Q + +LP ++ L++ Sbjct: 48 CAQRRESDARPSFDLTPAQEECLQRLQNRIDVPYDSSNVEHQEALRALWYAAFPG----EQLHGLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYFARNFPKSFQDLLR-----KQEGDRAMWEYPFAVAGVNITFMLIQMLDLEAVKPRNFVGATFLKFLAENESAFDLLYCITFKLMDNQWLTMHASYMDFNTVMKATRRQLENELLQEDITRLEDLPSYRLLSR 267
BLAST of EWM24209.1 vs. NCBI_GenBank
Match: gi|1026092320|ref|XP_016545342.1| (PREDICTED: ELMO domain-containing protein A isoform X2 [Capsicum annuum]) HSP 1 Score: 82.0333 bits (201), Expect = 6.470e-14 Identity = 59/185 (31.89%), Postives = 90/185 (48.65%), Query Frame = 0 Query: 253 PPDAETLLALWKALFPGAASRDEGARARSRQWRRAGCEEEDPLREFRGTGSMCVRCLTYFARTYPEKTQDILERYEAGKKEGCGNQEMYP--LIGVSNSLILI-MVDIFKLRDARYVHVQSTMWNLFEGGGYGTMEEVFSAALAYLDRRWMETEASIEGFSTLARETRRALEGVLGQGPLNLPHF 434 P E L ALWKA FP +E S QW+ G + +DP +FRG G + + L YFAR +P QD+L+ K+EG YP + GV+ + +LI M+DI ++ V + F G + ++ +D++W+ AS F+T+ + TRR +E L QG + F Sbjct: 96 PEHREALRALWKAAFPV----EELHGLISEQWKEMGWQGKDPSTDFRGAGFISLENLLYFARNFPRSFQDLLQ-----KQEGDRALWEYPFAVAGVNITFMLIQMLDIGAIKPRNLV---GATFLKFLAGNESAFDLLYCITFKLMDQQWLAMHASYMDFNTVMKSTRRRIERELLQGNIKRKIF 268
BLAST of EWM24209.1 vs. NCBI_GenBank
Match: gi|1109273658|ref|XP_019160979.1| (PREDICTED: ELMO domain-containing protein A-like isoform X1 [Ipomoea nil] >gi|1109273660|ref|XP_019160980.1| PREDICTED: ELMO domain-containing protein A-like isoform X1 [Ipomoea nil] >gi|1109273662|ref|XP_019160981.1| PREDICTED: ELMO domain-containing protein A-like isoform X1 [Ipomoea nil] >gi|1109273664|ref|XP_019160982.1| PREDICTED: ELMO domain-containing protein A-like isoform X1 [Ipomoea nil] >gi|1109273666|ref|XP_019160983.1| PREDICTED: ELMO domain-containing protein A-like isoform X1 [Ipomoea nil]) HSP 1 Score: 82.0333 bits (201), Expect = 7.929e-14 Identity = 54/209 (25.84%), Postives = 97/209 (46.41%), Query Frame = 0 Query: 221 AGDRREGRSLVPEGPSPSSVRYLRRWEDALVTPPDA------ETLLALWKALFPGAASRDEGARARSRQWRRAGCEEEDPLREFRGTGSMCVRCLTYFARTYPEKTQDILERYEAGKKEGCGNQEM--YPLIGVSNSLILIMVDIFKLRDARYVHVQSTMWNLFEGGGYGTMEEVFSAALAYLDRRWMETEASIEGFSTLARETRRALE 421 RR G + + +P+ L+R + + D+ E L+ LW A FPG +E S QW+ G + +DP +FRG G + + L YFAR++P+ QD+L + E GN+ + YP ++ +++ + L + ++ + F + ++ A +D++W+ AS F+T+ + TRR LE Sbjct: 67 CAQRRVGDARLIFDLTPTQKECLQRLHNRIDIAYDSSIHEHQEALMDLWNAAFPG----EELCGLISEQWKEMGWQGKDPSTDFRGCGLLSLENLLYFARSFPKSFQDLLHKLE-------GNRAIWEYPFAVAGVNITFMLIQMLDLESIKPRNLVGATFLKFLAENESAFDLLYCIAFKLMDQQWLAMRASYMDFNTVIKATRRQLE 264
BLAST of EWM24209.1 vs. NCBI_GenBank
Match: gi|1191640372|gb|OTF92374.1| (putative ELMO domain-containing protein [Helianthus annuus]) HSP 1 Score: 81.6481 bits (200), Expect = 8.689e-14 Identity = 59/210 (28.10%), Postives = 91/210 (43.33%), Query Frame = 0 Query: 217 GEGGAGDRREGRSLVPEGPSPSSVRYLRRWEDAL--VTPPDAETLLALWKALFPGAASRDEGARARSRQWRRAGCEEEDPLREFRGTGSMCVRCLTYFARTYPEKTQDILERYEAGKKEGCGNQEMYPLIGVSNSLILIMVDIFKLRDARYVHVQSTMWNLFEGGGYGTMEEVFSAALAYLDRRWMETEASIEGFSTLARETRRALEGVL 424 +G D R L PE +R R + A P E+LLALWKA FP +E S QW+ G + +DP +FRG G + + L YFAR +P+ QD+L K+EG + YP ++ +++ + L + + + F ++ A A +D W+ AS F+ + + TR LE L Sbjct: 47 AQGTEDDSRPSFDLTPEQED-CLMRLQNRLDIAYDSSVPEHQESLLALWKAAFP----EEELHGLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYFARNFPKSFQDLLR-----KQEGDRSMWEYPFAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLSDNESAFNLLYCVAFALMDHLWLAMHASYMDFNAVMKLTRHQLEKEL 246 The following BLAST results are available for this feature:
BLAST of EWM24209.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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