EWM30028.1, cds646 (CDS) Nannochloropsis gaditana

Overview
NameEWM30028.1
Unique Namecds646
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:76036..76063 -
Alignment locationCM002456.1:75578..75813 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30028.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100346g5.7656.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:76036..76063 -
CM002456.1supercontigCM002456.1:75578..75813 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM30028.1 vs. NCBI_GenBank
Match: gi|585112654|gb|EWM30028.1| (hypothetical protein Naga_100346g5 [Nannochloropsis gaditana])

HSP 1 Score: 181.415 bits (459), Expect = 5.333e-58
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 
Query:    1 MFEVLKYLDCRPRYYVVKGRSRTNFPCWICKVPCARLDDPTFDATQFLRERDEVYDLYDDIQALYAATEQEKRELKNSVIQAREGSK 87
            MFEVLKYLDCRPRYYVVKGRSRTNFPCWICKVPCARLDDPTFDATQFLRERDEVYDLYDDIQALYAATEQEKRELKNSVIQAREGSK
Sbjct:    1 MFEVLKYLDCRPRYYVVKGRSRTNFPCWICKVPCARLDDPTFDATQFLRERDEVYDLYDDIQALYAATEQEKRELKNSVIQAREGSK 87
The following BLAST results are available for this feature:
BLAST of EWM30028.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112654|gb|EWM30028.1|5.333e-58100.00hypothetical protein Naga_100346g5 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna646rna646Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications