EWM24278.1, cds6450 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24278.1 vs. NCBI_GenBank
Match: gi|585105669|gb|EWM24278.1| (Prohibitin [Nannochloropsis gaditana]) HSP 1 Score: 551.977 bits (1421), Expect = 0.000e+0 Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0
Query: 1 MEALLGRVAKLGAGVAGAAFVGNNFLFNVEGGHRAVVFDRFKGVLPKPLAEGTSIVIPVLQSAFLFDVRSKPRVINSVTGTKDLQHVNISLRVLSRPVEQMLPEIFSKIGQDFDERVLPGVGNEVLKAVVAQYNAEELLSKREQISDQIRVNLIKRAREFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYIVQRADQERKAVVIRAEGEAEAAMKISKAVADFGTALIEIRRIDAARDIADILSKSRNITYLPGGQNSGLLLGLTAGQG 276
MEALLGRVAKLGAGVAGAAFVGNNFLFNVEGGHRAVVFDRFKGVLPKPLAEGTSIVIPVLQSAFLFDVRSKPRVINSVTGTKDLQHVNISLRVLSRPVEQMLPEIFSKIGQDFDERVLPGVGNEVLKAVVAQYNAEELLSKREQISDQIRVNLIKRAREFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYIVQRADQERKAVVIRAEGEAEAAMKISKAVADFGTALIEIRRIDAARDIADILSKSRNITYLPGGQNSGLLLGLTAGQG
Sbjct: 1 MEALLGRVAKLGAGVAGAAFVGNNFLFNVEGGHRAVVFDRFKGVLPKPLAEGTSIVIPVLQSAFLFDVRSKPRVINSVTGTKDLQHVNISLRVLSRPVEQMLPEIFSKIGQDFDERVLPGVGNEVLKAVVAQYNAEELLSKREQISDQIRVNLIKRAREFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYIVQRADQERKAVVIRAEGEAEAAMKISKAVADFGTALIEIRRIDAARDIADILSKSRNITYLPGGQNSGLLLGLTAGQG 276
BLAST of EWM24278.1 vs. NCBI_GenBank
Match: gi|676384419|ref|XP_009035488.1| (hypothetical protein AURANDRAFT_59995 [Aureococcus anophagefferens] >gi|323453547|gb|EGB09418.1| hypothetical protein AURANDRAFT_59995 [Aureococcus anophagefferens]) HSP 1 Score: 356.295 bits (913), Expect = 4.728e-121 Identity = 180/276 (65.22%), Postives = 223/276 (80.80%), Query Frame = 0
Query: 1 MEALLGRVAKLGAGVAGAAFVGNNFLFNVEGGHRAVVFDRFKGVLPKPLAEGTSIVIPVLQSAFLFDVRSKPRVINSVTGTKDLQHVNISLRVLSRPVEQMLPEIFSKIGQDFDERVLPGVGNEVLKAVVAQYNAEELLSKREQISDQIRVNLIKRAREFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYIVQRADQERKAVVIRAEGEAEAAMKISKAVADFGTALIEIRRIDAARDIADILSKSRNITYLPGGQNSG---LLLGLTA 273
ME +L VA+LG GVAG +F+G+N L+NVEGGHRAV+FD +GVLPKP++EGT IPVLQ+ + D+RS+PR I SVTGTKDLQ VNI LRVLSRP E+ LP+I+ +G +FD+RVLP +GNEVLK+VVAQYNA++LLS REQIS QIR L KRA F+LILDDVSITHL F KEFT AIEQKQVA+Q+AERQ Y+V +A+QE+KA +IRAEGEAEAA ISKA+ G+ LIE+RRIDAAR++A+ LS++R +TYLP G + G +LLGL
Sbjct: 1 MEKVLTGVARLGMGVAGVSFIGSNCLYNVEGGHRAVMFDNIRGVLPKPISEGTGFKIPVLQTPIIMDIRSRPREIKSVTGTKDLQMVNIYLRVLSRPREEALPKIYMTLGTNFDDRVLPSLGNEVLKSVVAQYNADQLLSMREQISQQIRSTLTKRAEAFNLILDDVSITHLVFGKEFTSAIEQKQVAQQEAERQTYVVAKAEQEKKAAIIRAEGEAEAAATISKALEQCGSGLIEVRRIDAAREVAETLSRARGVTYLPSGGDKGGSNMLLGLNT 276
BLAST of EWM24278.1 vs. NCBI_GenBank
Match: gi|298710412|emb|CBJ25476.1| (Prohibitin complex subunit 1 [Ectocarpus siliculosus]) HSP 1 Score: 323.553 bits (828), Expect = 3.013e-108 Identity = 170/273 (62.27%), Postives = 208/273 (76.19%), Query Frame = 0
Query: 2 EALLGRVAKLGAGVAGAAFVGNNFLFNVEGGHRAVVFDRFKGVLPKPLAEGTSIVIPVLQSAFLFDVRSKPRVINSVTGTKDLQHVNISLRVLSRPVEQMLPEIFSKIGQDFDERVLPGVGNEVLKAVVAQYNAEELLSKREQISDQIRVNLIKRAREFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYIVQRADQERKAVVIRAEGEAEAAMKISKAVADFGTALIEIRRIDAARDIADILSKSRNITYLPGGQNSGLLLGLTAG 274
E LL V++LG GV A LFNV+GG RAV+FDRF+GV + EGT +IP++Q + DVR++PR INS+TGTKDLQ NISLRVLSRP+E LP I+ ++G DFD+RVLP +GNEVLKAVVA+YNAEELLSKRE +S +IR L RA++FHLI+DDVSITHLTF EFTKAIE KQVA+Q+AERQ+Y+V +DQER A +IRAEGEAEAA IS A+ + G LIE+RRID A++IA L+ SRNITYLP G S +LLGL
Sbjct: 3 EKLLQNVSRLG-GVVAIAAATEMCLFNVDGGQRAVIFDRFQGVKEAVVGEGTHFMIPIVQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKRESVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAELISAALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTGGGSNMLLGLNTA 274
BLAST of EWM24278.1 vs. NCBI_GenBank
Match: gi|397617939|gb|EJK64680.1| (hypothetical protein THAOC_14563 [Thalassiosira oceanica]) HSP 1 Score: 321.242 bits (822), Expect = 3.124e-107 Identity = 159/261 (60.92%), Postives = 199/261 (76.25%), Query Frame = 0
Query: 1 MEALLGRVAKLGAGVAGAAFVGNNFLFNVEGGHRAVVFDRFKG-VLPKPLAEGTSIVIPVLQSAFLFDVRSKPRVINSVTGTKDLQHVNISLRVLSRPVEQMLPEIFSKIGQDFDERVLPGVGNEVLKAVVAQYNAEELLSKREQISDQIRVNLIKRAREFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYIVQRADQERKAVVIRAEGEAEAAMKISKAVADFGTALIEIRRIDAARDIADILSKSRNITYLP 260
M+ +L R++ + AF N+ L+NV+GG RAV+FD +G +LP EGT ++IPV+Q + DVR+KPR I SVTGTKDLQ VNI LRVL RPV + LP+++ ++G DFDERVLP +GNEVLK+VVAQYNAEELLSKR ++S +I+ LIKR FHL LDDVSITHLTF +EF KAIE KQVA Q+AERQ Y+V RA+QER A V RAEGEAEAA I+KA+ G A++E+RRIDAA++IA L+K RNITYLP
Sbjct: 1 MDKVLSRISSAAGALTVGAFTVNSCLYNVDGGERAVLFDTLRGGILPDVRDEGTHLMIPVIQRPIIIDVRTKPREIPSVTGTKDLQMVNIKLRVLWRPVIEKLPQLYRELGTDFDERVLPSIGNEVLKSVVAQYNAEELLSKRAEVSARIKAELIKRGAHFHLTLDDVSITHLTFGREFMKAIESKQVASQEAERQQYVVMRAEQERIANVTRAEGEAEAATIITKAMEKTGNAIVEVRRIDAAKEIATKLAKGRNITYLP 261
BLAST of EWM24278.1 vs. NCBI_GenBank
Match: gi|545355904|ref|XP_005643722.1| (prohibitin [Coccomyxa subellipsoidea C-169] >gi|384245685|gb|EIE19178.1| prohibitin [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 320.857 bits (821), Expect = 4.961e-107 Identity = 156/271 (57.56%), Postives = 207/271 (76.38%), Query Frame = 0
Query: 4 LLGRVAKLGAGVAGAAFVGNNFLFNVEGGHRAVVFDRFKGVLPKPLAEGTSIVIPVLQSAFLFDVRSKPRVINSVTGTKDLQHVNISLRVLSRPVEQMLPEIFSKIGQDFDERVLPGVGNEVLKAVVAQYNAEELLSKREQISDQIRVNLIKRAREFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYIVQRADQERKAVVIRAEGEAEAAMKISKAVADFGTALIEIRRIDAARDIADILSKSRNITYLPGGQNSGLLLGLTAG 274
LLGRV + V + + L+ V+GG RAV++DR +GVL +P+ EGT +P LQS + D+R++PR I+SVTGTKDLQ VNISLRVLS+P +L +I+ +G D+DERVLP +GNEVLKAVVAQYNAE+LL++R+++S +R NL+ RA+EF++++DD++ITHL+F EFTKA+E KQVA+QDAER ++V +ADQER A VIRAEGE+E+A IS+A G LIE+RRI+AA+DIA LSKS NI YLPGG S +LLGL G
Sbjct: 15 LLGRVGRFAVVVGIGGGIAQSSLYTVDGGERAVIYDRIRGVLDQPVGEGTHFRVPWLQSPNVMDIRTRPRTISSVTGTKDLQMVNISLRVLSKPDSSVLTQIYRSLGLDWDERVLPSIGNEVLKAVVAQYNAEQLLTQRDRVSRAVRENLMTRAKEFNILVDDIAITHLSFGTEFTKAVESKQVAQQDAERARFVVLKADQERIAAVIRAEGESESARLISEATKSAGPGLIELRRIEAAKDIASTLSKSGNIMYLPGG-GSNMLLGLNPG 284
BLAST of EWM24278.1 vs. NCBI_GenBank
Match: gi|168008126|ref|XP_001756758.1| (predicted protein [Physcomitrella patens] >gi|162691996|gb|EDQ78355.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 320.472 bits (820), Expect = 6.458e-107 Identity = 155/271 (57.20%), Postives = 213/271 (78.60%), Query Frame = 0
Query: 1 MEALLGRVAKLGAGVAGAAFVGNNFLFNVEGGHRAVVFDRFKGVLPKPLAEGTSIVIPVLQSAFLFDVRSKPRVINSVTGTKDLQHVNISLRVLSRPVEQMLPEIFSKIGQDFDERVLPGVGNEVLKAVVAQYNAEELLSKREQISDQIRVNLIKRAREFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYIVQRADQERKAVVIRAEGEAEAAMKISKAVADFGTALIEIRRIDAARDIADILSKSRNITYLPGGQNSGLLLGL 271
+++L G A + GV G+A N L+ V+GGHRAV+FDRF+GVL + EGT +IPVLQ ++FD+R++PR I SVTGTKDLQ VN++LRVLSRP LP IF +G D+D+R+LP +GNEVLKAVVAQ+NA++LL++R +S +R L+KRA++F+LILDDV+ITHL++ EF++A+EQKQVA+Q+AER ++V +ADQER+A ++RAEGE+EAA IS A + G LIE+R+I+AAR+IA L+KSRNI+YLPGG N +LLG+
Sbjct: 10 LQSLAG--AAIAFGVGGSAL--NASLYTVDGGHRAVLFDRFRGVLDETAGEGTHFLIPVLQKPYIFDIRTRPRSITSVTGTKDLQMVNLTLRVLSRPDSGELPTIFKTLGTDYDDRILPSIGNEVLKAVVAQFNADQLLTERPFVSALVRDALLKRAKDFNLILDDVAITHLSYGAEFSRAVEQKQVAQQEAERSKFVVAKADQERRAAIVRAEGESEAAKLISDATSSAGGGLIELRKIEAAREIASTLAKSRNISYLPGGNN--MLLGI 274
BLAST of EWM24278.1 vs. NCBI_GenBank
Match: gi|568831451|ref|XP_006469979.1| (PREDICTED: prohibitin-3, mitochondrial [Citrus sinensis] >gi|641821757|gb|KDO41385.1| hypothetical protein CISIN_1g023231mg [Citrus sinensis]) HSP 1 Score: 320.087 bits (819), Expect = 9.862e-107 Identity = 148/269 (55.02%), Postives = 212/269 (78.81%), Query Frame = 0
Query: 3 ALLGRVAKLGAGVAGAAFVGNNFLFNVEGGHRAVVFDRFKGVLPKPLAEGTSIVIPVLQSAFLFDVRSKPRVINSVTGTKDLQHVNISLRVLSRPVEQMLPEIFSKIGQDFDERVLPGVGNEVLKAVVAQYNAEELLSKREQISDQIRVNLIKRAREFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYIVQRADQERKAVVIRAEGEAEAAMKISKAVADFGTALIEIRRIDAARDIADILSKSRNITYLPGGQNSGLLLGL 271
+ L +A+ G+ AA V N+ L+ V+GG RAV+FDRF+GV+ + + EGT +IP LQ F+FD+R++P +SV+GTKDLQ VN++LRVLSRP LP IF +G ++DE+VLP +GNEVLKAVVAQ+NA++LL++R +S +R +LIKRAR+F+++LDDV+ITHL++ EF++A+EQKQVA+Q+AER ++V +ADQER+A +IRAEGE+EAA IS+A + FG LIE+RRI+A+R+IA L++S ++ YLPGG+NS +LL L
Sbjct: 9 SFLTNIARAAFGLGAAATVLNSSLYTVDGGERAVLFDRFRGVIDETIGEGTHFLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLTLRVLSRPEVSRLPYIFQHLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLIKRARDFNIVLDDVAITHLSYGAEFSRAVEQKQVAQQEAERSKFVVMKADQERRAAIIRAEGESEAAQLISEATSKFGLGLIELRRIEASREIAATLARSPHVAYLPGGKNSNMLLAL 277
BLAST of EWM24278.1 vs. NCBI_GenBank
Match: gi|514713998|ref|XP_004952899.1| (PREDICTED: prohibitin-3, mitochondrial-like [Setaria italica] >gi|944265969|gb|KQL30209.1| hypothetical protein SETIT_018025mg [Setaria italica]) HSP 1 Score: 319.701 bits (818), Expect = 1.183e-106 Identity = 146/273 (53.48%), Postives = 213/273 (78.02%), Query Frame = 0
Query: 3 ALLGRVAKLGAGVAGAAFVGNNFLFNVEGGHRAVVFDRFKGVLPKPLAEGTSIVIPVLQSAFLFDVRSKPRVINSVTGTKDLQHVNISLRVLSRPVEQMLPEIFSKIGQDFDERVLPGVGNEVLKAVVAQYNAEELLSKREQISDQIRVNLIKRAREFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYIVQRADQERKAVVIRAEGEAEAAMKISKAVADFGTALIEIRRIDAARDIADILSKSRNITYLPGGQNSGLLLGLTAGQ 275
+ L R+AK+ AG+ AA + L+ V+GG RAV+FDR +GVLP+ AEGT +++P+LQ F+FD+R++P +S +GTKDLQ V+++LRVLSRP LPEIF+ +G ++DE+VLP +GNEVLKAVVAQ+NA++LL++R +S +R +L +RAREF+++LDDV+ITHL + EF +A+E+KQVA+Q+AER ++V RADQER+A ++RAEGE+EAA IS+A G LIE+RRI+AA++IA +L++S N++Y+P G N +LLGL A +
Sbjct: 10 SFLTRIAKVAAGIGVAASAASTSLYTVDGGERAVIFDRLRGVLPRTEAEGTHLLVPILQKPFIFDIRTRPHSFSSTSGTKDLQMVSLTLRVLSRPDVDRLPEIFNSLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLTQRAREFNIVLDDVAITHLAYGPEFAQAVEKKQVAQQEAERSRFLVARADQERRAAIVRAEGESEAARLISEATTTAGNGLIELRRIEAAKEIAGVLARSPNVSYIPAGDNGQMLLGLNAAR 282
BLAST of EWM24278.1 vs. NCBI_GenBank
Match: gi|168060247|ref|XP_001782109.1| (predicted protein [Physcomitrella patens] >gi|162666449|gb|EDQ53103.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 319.316 bits (817), Expect = 2.026e-106 Identity = 154/269 (57.25%), Postives = 208/269 (77.32%), Query Frame = 0
Query: 3 ALLGRVAKLGAGVAGAAFVGNNFLFNVEGGHRAVVFDRFKGVLPKPLAEGTSIVIPVLQSAFLFDVRSKPRVINSVTGTKDLQHVNISLRVLSRPVEQMLPEIFSKIGQDFDERVLPGVGNEVLKAVVAQYNAEELLSKREQISDQIRVNLIKRAREFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYIVQRADQERKAVVIRAEGEAEAAMKISKAVADFGTALIEIRRIDAARDIADILSKSRNITYLPGGQNSGLLLGL 271
ALL VA+ V + N L+ V+GGHRAV+FDRF+GVL + EGT +IPVLQ ++FDVR++PR I +VTGTKDLQ VN++LRVLS+P MLP IF +G D+D+RVLP +GNEVLKAVVAQ+NA++LL++R +S +R LIKRA++F+L+LDDV+ITHL++ EF++A+EQKQVA+Q+AER ++V +ADQER+A ++RAEGE+EAA IS A A G LIE+RRI+A+R+IA L+KSRN+ YLP G N +LLG+
Sbjct: 10 ALLQSVARTAIAVGVGGSLLNTSLYTVDGGHRAVLFDRFRGVLDETAGEGTHFLIPVLQKPYIFDVRTRPRNITTVTGTKDLQMVNLTLRVLSKPDPSMLPYIFKTLGNDYDDRVLPSIGNEVLKAVVAQFNADQLLTERPFVSALVRDALIKRAKDFNLLLDDVAITHLSYGAEFSRAVEQKQVAQQEAERSKFVVMKADQERRAAIVRAEGESEAAKLISDATASAGGGLIELRRIEASREIAATLAKSRNVVYLPSGNN--MLLGI 276
BLAST of EWM24278.1 vs. NCBI_GenBank
Match: gi|219126214|ref|XP_002183357.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405113|gb|EEC45057.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 318.161 bits (814), Expect = 2.884e-106 Identity = 154/267 (57.68%), Postives = 204/267 (76.40%), Query Frame = 0
Query: 1 MEALLGRVAKLGAGVAGAAFVGNNFLFNVEGGHRAVVFDRFKG-VLPKPLAEGTSIVIPVLQSAFLFDVRSKPRVINSVTGTKDLQHVNISLRVLSRPVEQMLPEIFSKIGQDFDERVLPGVGNEVLKAVVAQYNAEELLSKREQISDQIRVNLIKRAREFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYIVQRADQERKAVVIRAEGEAEAAMKISKAVADFGTALIEIRRIDAARDIADILSKSRNITYLP--GGQN 264
MEA L R+ + +A F + L+ V+GG RAV+FD +G +LP EGT ++P++Q + D+R+KPR + SVTGTKDLQ VNI LRVL RP+E+ LP ++ ++G DFDERVLP +GNEVLK+VVAQYNAEELLSKR ++S++I+ ++KRA+ FHL LDDVSITHLTF +EF KAIE KQVA Q+AERQ ++V++A+QER+A+V RAEGEAE+A I+KA+ G A+IE+RRIDAA++IA L+ SRNI YLP GG N
Sbjct: 1 MEAALNRLGRATGALAVGTFTVSQCLYTVDGGERAVMFDTLRGGILPDVRKEGTHFIVPIIQRPVIMDIRTKPREVPSVTGTKDLQMVNIKLRVLWRPIEEELPTLYRELGTDFDERVLPSIGNEVLKSVVAQYNAEELLSKRAEVSERIKNEMMKRAKHFHLTLDDVSITHLTFGREFMKAIEAKQVASQEAERQQWVVKKAEQERQAMVTRAEGEAESARIITKAMEKTGNAIIEVRRIDAAKEIAGKLANSRNIVYLPNTGGGN 267 The following BLAST results are available for this feature:
BLAST of EWM24278.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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