EWM24234.1, cds6441 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24234.1 vs. NCBI_GenBank
Match: gi|585105625|gb|EWM24234.1| (pentatricopeptide repeat-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 1973.75 bits (5112), Expect = 0.000e+0 Identity = 964/964 (100.00%), Postives = 964/964 (100.00%), Query Frame = 0
Query: 1 METPPQTLPPSPPGNRHSPEPSRPQATSRIRRRSHSISGCGGAVIAEWWRLMLLSSSAATAAAAATAAFIGSGGATPTSVGGAVPTAWWVSTQQQQQLNRQSQLHNSWCAVSSTSRLATATGGWDSSAAPLRGRRGWDGMMGAPDKEEVLLRAASPVRGMSEKPQARWQGEGPDARDEEGQDRAGNAGSSWMEALRLEKGALRRNHRFEVTIQKPLGIFMSEGEADVGAPTISEVRLGSNADKAGLRVGDRIVAASATVGNKLWTKTTLVGVESAINSRFRFSDDITFCVERTLAQDAGDDSIASRQVEVFEVELERPVPLEWMQENAEGGVFVRRVLKADCEALRRIQPYDRVVAVSASLGDRMWRTNSLDGVLSALCTRIGSKVRLQFERSPEVARLIARGAGNPGVGVADLVPPLPPRPSMAAASLLSPPSTADLVAKGEMLLMGEPRVHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSGIHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRLLPNLETHQCLLEMPTPSTGGAVSGLAHGDGVESQMEEAREQLVMFYHAALKLLAEQKVRARVNLYVACLHACLRTDRLDLAAEVMALRRANTLQIFQLFKKHEEKVHRWERKIDRELDARFYSNKNLV 964
METPPQTLPPSPPGNRHSPEPSRPQATSRIRRRSHSISGCGGAVIAEWWRLMLLSSSAATAAAAATAAFIGSGGATPTSVGGAVPTAWWVSTQQQQQLNRQSQLHNSWCAVSSTSRLATATGGWDSSAAPLRGRRGWDGMMGAPDKEEVLLRAASPVRGMSEKPQARWQGEGPDARDEEGQDRAGNAGSSWMEALRLEKGALRRNHRFEVTIQKPLGIFMSEGEADVGAPTISEVRLGSNADKAGLRVGDRIVAASATVGNKLWTKTTLVGVESAINSRFRFSDDITFCVERTLAQDAGDDSIASRQVEVFEVELERPVPLEWMQENAEGGVFVRRVLKADCEALRRIQPYDRVVAVSASLGDRMWRTNSLDGVLSALCTRIGSKVRLQFERSPEVARLIARGAGNPGVGVADLVPPLPPRPSMAAASLLSPPSTADLVAKGEMLLMGEPRVHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSGIHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRLLPNLETHQCLLEMPTPSTGGAVSGLAHGDGVESQMEEAREQLVMFYHAALKLLAEQKVRARVNLYVACLHACLRTDRLDLAAEVMALRRANTLQIFQLFKKHEEKVHRWERKIDRELDARFYSNKNLV
Sbjct: 1 METPPQTLPPSPPGNRHSPEPSRPQATSRIRRRSHSISGCGGAVIAEWWRLMLLSSSAATAAAAATAAFIGSGGATPTSVGGAVPTAWWVSTQQQQQLNRQSQLHNSWCAVSSTSRLATATGGWDSSAAPLRGRRGWDGMMGAPDKEEVLLRAASPVRGMSEKPQARWQGEGPDARDEEGQDRAGNAGSSWMEALRLEKGALRRNHRFEVTIQKPLGIFMSEGEADVGAPTISEVRLGSNADKAGLRVGDRIVAASATVGNKLWTKTTLVGVESAINSRFRFSDDITFCVERTLAQDAGDDSIASRQVEVFEVELERPVPLEWMQENAEGGVFVRRVLKADCEALRRIQPYDRVVAVSASLGDRMWRTNSLDGVLSALCTRIGSKVRLQFERSPEVARLIARGAGNPGVGVADLVPPLPPRPSMAAASLLSPPSTADLVAKGEMLLMGEPRVHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSGIHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRLLPNLETHQCLLEMPTPSTGGAVSGLAHGDGVESQMEEAREQLVMFYHAALKLLAEQKVRARVNLYVACLHACLRTDRLDLAAEVMALRRANTLQIFQLFKKHEEKVHRWERKIDRELDARFYSNKNLV 964
BLAST of EWM24234.1 vs. NCBI_GenBank
Match: gi|553184162|ref|XP_005854039.1| (hypothetical protein NGA_2025420 [Nannochloropsis gaditana CCMP526] >gi|553196310|ref|XP_005856315.1| hypothetical protein NGA_2025410 [Nannochloropsis gaditana CCMP526] >gi|422292736|gb|EKU20038.1| hypothetical protein NGA_2025410 [Nannochloropsis gaditana CCMP526] >gi|422295019|gb|EKU22318.1| hypothetical protein NGA_2025420 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1082.4 bits (2798), Expect = 0.000e+0 Identity = 526/527 (99.81%), Postives = 527/527 (100.00%), Query Frame = 0
Query: 438 LVAKGEMLLMGEPRVHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSGIHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRLLPNLETHQCLLEMPTPSTGGAVSGLAHGDGVESQMEEAREQLVMFYHAALKLLAEQKVRARVNLYVACLHACLRTDRLDLAAEVMALRRANTLQIFQLFKKHEEKVHRWERKIDRELDARFYSNKNLV 964
+VAKGEMLLMGEPRVHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSGIHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRLLPNLETHQCLLEMPTPSTGGAVSGLAHGDGVESQMEEAREQLVMFYHAALKLLAEQKVRARVNLYVACLHACLRTDRLDLAAEVMALRRANTLQIFQLFKKHEEKVHRWERKIDRELDARFYSNKNLV
Sbjct: 1 MVAKGEMLLMGEPRVHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSGIHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRLLPNLETHQCLLEMPTPSTGGAVSGLAHGDGVESQMEEAREQLVMFYHAALKLLAEQKVRARVNLYVACLHACLRTDRLDLAAEVMALRRANTLQIFQLFKKHEEKVHRWERKIDRELDARFYSNKNLV 527
BLAST of EWM24234.1 vs. NCBI_GenBank
Match: gi|553184168|ref|XP_005854041.1| (hypothetical protein NGA_2094920, partial [Nannochloropsis gaditana CCMP526] >gi|553196329|ref|XP_005856321.1| hypothetical protein NGA_2094910, partial [Nannochloropsis gaditana CCMP526] >gi|422292742|gb|EKU20044.1| hypothetical protein NGA_2094910, partial [Nannochloropsis gaditana CCMP526] >gi|422295021|gb|EKU22320.1| hypothetical protein NGA_2094920, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 735.332 bits (1897), Expect = 0.000e+0 Identity = 361/367 (98.37%), Postives = 363/367 (98.91%), Query Frame = 0
Query: 1 METPPQTLPPSPPGNRHSPEPSRPQATSRIRRRSHSISGCGGAVIAEWWRLMLLSSSAATAAAAATAAFIGSGGATPTSVGGAVPTAWWVSTQQQQQLNRQSQLHNSWCAVSSTSRLATATGGWDSSAAPLRGRRGWDGMMGAPDKEEVLLRAASPVRGMSEKPQARWQGEGPDARDEEGQDRAGNAGSSWMEALRLEKGALRRNHRFEVTIQKPLGIFMSEGEADVGAPTISEVRLGSNADKAGLRVGDRIVAASATVGNKLWTKTTLVGVESAINSRFRFSDDITFCVERTLAQDAGDDSIASRQVEVFEVELERPVPLEWMQENAEGGVFVRRVLKADCEALRRIQPYDRVVAVSASLGDRMWR 367
METPPQTLPPSP GNRHSPEPSRPQATSRIRRRSHSISGCGGAVIAEWWRLMLLSSSAATAAAAATAAFIGSGGATPTSVGGAVPTAWWVSTQQQQQLNRQSQLHNSWCAVSSTSRLATATGGWDSSAAPLRGRRGWDGMMGAPDKEEVLLRAASPVRGMSEKPQARWQGEGPD R+EEGQDRAGN GSSWMEALRLEKGALRRNHRFEVTI+KPLGIFMSEGEADVGAPTISEVRLGSNADKAGLRVGDRIVAASATVGNKLWTKTTLVGVESAINSRFRFSDDITFCVERTLAQDAGDDSIASRQVEVFEVELERPVPLE MQENAEGGVFVRRVLKADCEALRRIQPYDRVVAVSASLGDRMWR
Sbjct: 1 METPPQTLPPSPLGNRHSPEPSRPQATSRIRRRSHSISGCGGAVIAEWWRLMLLSSSAATAAAAATAAFIGSGGATPTSVGGAVPTAWWVSTQQQQQLNRQSQLHNSWCAVSSTSRLATATGGWDSSAAPLRGRRGWDGMMGAPDKEEVLLRAASPVRGMSEKPQARWQGEGPDGREEEGQDRAGNVGSSWMEALRLEKGALRRNHRFEVTIRKPLGIFMSEGEADVGAPTISEVRLGSNADKAGLRVGDRIVAASATVGNKLWTKTTLVGVESAINSRFRFSDDITFCVERTLAQDAGDDSIASRQVEVFEVELERPVPLELMQENAEGGVFVRRVLKADCEALRRIQPYDRVVAVSASLGDRMWR 367
BLAST of EWM24234.1 vs. NCBI_GenBank
Match: gi|1023176429|pdb|5I9F|A (Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat Protein Dppr- U10 In Complex With Its Target Rna U10) HSP 1 Score: 207.223 bits (526), Expect = 1.428e-54 Identity = 125/387 (32.30%), Postives = 208/387 (53.75%), Query Frame = 0
Query: 450 PRVHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSGIHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRL 836
P V + + G +A D A+ +F+ VE+G+ PD ++LI + D+AL++ M+E G+ PD+VT N +D K + +E L+LF EE+ G+ PD+ +Y L++ K G+L EAL LFEE V G++P++ Y +I K + AL L + + G+ PD YNTL+ G K + +A+++ M KG+ PD +TY+ L+ L +L+ A L+ EM +KG +KP++ Y+ +D KAG +A+ +F+EM ++P++VTY L++ +AG AL + +EM K G+ DV + + + G L+ L +EM + GI + + Y + + R+ R+E A LS + E L
Sbjct: 49 PTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLF-EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK-GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSETDL 432 HSP 2 Score: 206.838 bits (525), Expect = 1.470e-54 Identity = 121/378 (32.01%), Postives = 208/378 (55.03%), Query Frame = 0
Query: 471 AISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSGIHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRLLPNLETHQCLLE 848
A+ +F +G+ P ++LI + D+AL++ M+E G+ PD+VT N +D K + +E L+LF EE+ G+ PD+ +Y L++ K G+L EAL LFEE V G++P++ Y +I K + AL L + + G+ PD YNTL+ G K + +A+++ M KG+ PD +TY+ L+ L +L+ A L+ EM +KG +KP++ Y+ +D KAG +A+ +F+EM ++P++VTY L++ +AG AL + +EM K G+ DV + + + G L+ L +EM + GI +VV YN + G ++G+ + AL++ + EK + P+ T++ ++E
Sbjct: 35 ALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLF-EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK-GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVE 409 HSP 3 Score: 199.904 bits (507), Expect = 4.971e-52 Identity = 116/363 (31.96%), Postives = 200/363 (55.10%), Query Frame = 0
Query: 486 DAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSGIHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRLLPNLETHQCLLE 848
D ++++ A + ++ALE+ + GVAP +VT N +D K + +E L+LF EE+ G+ PD+ +Y L++ K G+L EAL LFEE V G++P++ Y +I K + AL L + + G+ PD YNTL+ G K + +A+++ M KG+ PD +TY+ L+ L +L+ A L+ EM +KG +KP++ Y+ +D KAG +A+ +F+EM ++P++VTY L++ +AG AL + +EM K G+ DV + + + G L+ L +EM + GI +VV YN + G ++G+ + AL++ + EK + P++ T+ L++
Sbjct: 15 DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLF-EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK-GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 374 HSP 4 Score: 189.889 bits (481), Expect = 1.667e-48 Identity = 106/315 (33.65%), Postives = 176/315 (55.87%), Query Frame = 0
Query: 449 EPRVHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRK 763
+P V + + G +A D A+ +F+ VE+G+ PD ++LI + D+AL++ M+E G+ PD+VT N +D K + +E L+LF EE+ G+ PD+ +Y L++ K G+L EAL LFEE V G++P++ Y +I K + AL L + + G+ PD YNTL+ G K + +A+++ M KG+ PD +TY+ L+ L +L+ A L+ EM +KG +KP++ Y+ +D KAG +A+ +F+EM ++P++VTY L++ +AG AL + +EM K
Sbjct: 83 KPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLF-EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK 395 HSP 5 Score: 150.984 bits (380), Expect = 3.265e-35 Identity = 88/264 (33.33%), Postives = 145/264 (54.92%), Query Frame = 0
Query: 449 EPRVHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKA 712
+P V + + G +A D A+ +F+ VE+G+ PD ++LI + D+AL++ M+E G+ PD+VT N +D K + +E L+LF EE+ G+ PD+ +Y L++ K G+L EAL LFEE V G++P++ Y +I K + AL L + + G+ PD YNTL+ G K + +A+++ M KG+ PD +TY+ L+ L +L+ A L+ EM +KG +KP+ Y V+ + +A
Sbjct: 153 KPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLF-EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDELTYRRVVESYCRA 414 HSP 6 Score: 135.961 bits (341), Expect = 2.966e-30 Identity = 83/256 (32.42%), Postives = 133/256 (51.95%), Query Frame = 0
Query: 449 EPRVHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMR--DKGHVKPNLELY 702
+P V + + G +A D A+ +F+ VE+G+ PD ++LI + D+AL++ M+E G+ PD+VT N +D K + +E L+LF EE+ G+ PD+ +Y L++ K G+L EAL LFEE V G++P++ Y +I K + AL L + + G+ PD YNTL+ G K + +A+++ M KG+ PD LTY ++ + E A+ E+ D K LE Y
Sbjct: 188 KPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLF-EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSETDLDFDKKALEAY 442
BLAST of EWM24234.1 vs. NCBI_GenBank
Match: gi|1023176433|pdb|5I9H|A (Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat Protein Dppr- U8g2 In Complex With Its Target Rna U8g2) HSP 1 Score: 206.453 bits (524), Expect = 2.194e-54 Identity = 125/387 (32.30%), Postives = 208/387 (53.75%), Query Frame = 0
Query: 450 PRVHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSGIHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRL 836
P V + + G +A D A+ +F+ VE+G+ PD ++LI + D+AL++ M+E G+ PD+VT N +D K + +E L+LF EE+ G+ PD+ +Y L++ K G+L EAL LFEE V G++P++ YT +I K + AL L + + G+ PD Y TL+ G K + +A+++ M KG+ PD +TY+ L+ L +L+ A L+ EM +KG +KP++ Y+ +D KAG +A+ +F+EM ++P++VTY L++ +AG AL + +EM K G+ DV + + + G L+ L +EM + GI + + Y + + R+ R+E A LS + E L
Sbjct: 49 PTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLF-EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK-GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSETDL 432 HSP 2 Score: 204.912 bits (520), Expect = 8.434e-54 Identity = 120/378 (31.75%), Postives = 207/378 (54.76%), Query Frame = 0
Query: 471 AISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSGIHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRLLPNLETHQCLLE 848
A+ +F +G+ P ++LI + D+AL++ M+E G+ PD+VT N +D K + +E L+LF EE+ G+ PD+ +Y L++ K G+L EAL LFEE V G++P++ Y +I K + AL L + + G+ PD Y TL+ G K + +A+++ M KG+ PD +TY+ L+ L +L+ A L+ EM +KG +KP++ Y+ +D KAG +A+ +F+EM ++P++VTY L++ +AG AL + +EM K G+ DV + + + G L+ L +EM + GI +VV YN + G ++G+ + AL++ + EK + P+ T++ ++E
Sbjct: 35 ALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLF-EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK-GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVE 409 HSP 3 Score: 200.29 bits (508), Expect = 3.089e-52 Identity = 116/363 (31.96%), Postives = 200/363 (55.10%), Query Frame = 0
Query: 486 DAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSGIHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRLLPNLETHQCLLE 848
D ++++ A + ++ALE+ + GVAP +VT N +D K + +E L+LF EE+ G+ PD+ +Y L++ K G+L EAL LFEE V G++P++ Y +I K + AL L + + G+ PD YNTL+ G K + +A+++ M KG+ PD +TY+ L+ L +L+ A L+ EM +KG +KP++ Y+ +D KAG +A+ +F+EM ++P++VTY L++ +AG AL + +EM K G+ DV + + + G L+ L +EM + GI +VV YN + G ++G+ + AL++ + EK + P++ T+ L++
Sbjct: 15 DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLF-EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK-GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 374 HSP 4 Score: 193.356 bits (490), Expect = 8.087e-50 Identity = 108/315 (34.29%), Postives = 178/315 (56.51%), Query Frame = 0
Query: 449 EPRVHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRK 763
+P V + + G +A D A+ +F+ VE+G+ PD ++LI + D+AL++ M+E G+ PD+VT N +D K + +E L+LF EE+ G+ PD+ +YT L++ K G+L EAL LFEE V G++P++ YT +I K + AL L + + G+ PD YNTL+ G K + +A+++ M KG+ PD +TY+ L+ L +L+ A L+ EM +KG +KP++ Y+ +D KAG +A+ +F+EM ++P++VTY L++ +AG AL + +EM K
Sbjct: 83 KPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLF-EEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYTTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK 395
BLAST of EWM24234.1 vs. NCBI_GenBank
Match: gi|1023176427|pdb|5I9D|A (Chain A, Crystal Structure Of Designed Pentatricopeptide Repeat Protein Dppr- U8a2 In Complex With Its Target Rna U8a2) HSP 1 Score: 206.068 bits (523), Expect = 2.828e-54 Identity = 120/363 (33.06%), Postives = 200/363 (55.10%), Query Frame = 0
Query: 486 DAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSGIHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRLLPNLETHQCLLE 848
D ++++ A + ++ALE+ + GVAP +VT N +D K + +E L+LF EE+ G+ PD+ +Y L++ K G+L EAL LFEE V G++P++ Y +I K + AL L + + G+ PD YNTL+ G K + +A+++ M KG+ PD +TYS L+ L +L+ A L+ EM +KG +KPN+ YS +D KAG +A+ +F+EM ++PN+VTY L++ +AG AL + +EM K G+ DV + + + G L+ L +EM + GI +VV YN + G ++G+ + AL++ + EK + P++ T+ L++
Sbjct: 15 DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLF-EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKG-IKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEK-GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 374 HSP 2 Score: 206.068 bits (523), Expect = 3.306e-54 Identity = 125/397 (31.49%), Postives = 215/397 (54.16%), Query Frame = 0
Query: 452 VHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSGIHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRLLPNLETHQCLLE 848
V A + + RA + A+ +F +G+ P ++LI + D+AL++ M+E G+ PD+VT N +D K + +E L+LF EE+ G+ PD+ +Y L++ K G+L EAL LFEE V G++P++ Y +I K + AL L + + G+ PD Y+TL+ G K + +A+++ M KG+ P+ +TYS L+ L +L+ A L+ EM +KG +KPN+ Y+ +D KAG +A+ +F+EM ++P++VTY L++ +AG AL + +EM K G+ DV + + + G L+ L +EM + GI +VV YN + G ++G+ + AL++ + EK + P+ T++ ++E
Sbjct: 16 VRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLF-EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKG-IKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK-GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVE 409 HSP 3 Score: 201.445 bits (511), Expect = 1.352e-52 Identity = 122/387 (31.52%), Postives = 209/387 (54.01%), Query Frame = 0
Query: 450 PRVHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSGIHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRL 836
P V + + G +A D A+ +F+ VE+G+ PD ++LI + D+AL++ M+E G+ PD+VT N +D K + +E L+LF EE+ G+ PD+ +Y L++ K G+L EAL LFEE V G++P++ Y+ +I K + AL L + + G+ P+ Y+TL+ G K + +A+++ M KG+ P+ +TY+ L+ L +L+ A L+ EM +KG +KP++ Y+ +D KAG +A+ +F+EM ++P++VTY L++ +AG AL + +EM K G+ DV + + + G L+ L +EM + GI + + Y + + R+ R+E A LS + E L
Sbjct: 49 PTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLF-EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK-GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSETDL 432 HSP 4 Score: 187.963 bits (476), Expect = 6.530e-48 Identity = 105/315 (33.33%), Postives = 177/315 (56.19%), Query Frame = 0
Query: 449 EPRVHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRK 763
+P V + + G +A D A+ +F+ VE+G+ PD ++LI + D+AL++ M+E G+ PD+VT N +D K + +E L+LF EE+ G+ PD+ +Y+ L++ K G+L EAL LFEE V G++P + Y+ +I K + AL L + + G+ P+ YNTL+ G K + +A+++ M KG+ PD +TY+ L+ L +L+ A L+ EM +KG +KP++ Y+ +D KAG +A+ +F+EM ++P++VTY L++ +AG AL + +EM K
Sbjct: 83 KPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLF-EEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK 395 HSP 5 Score: 145.976 bits (367), Expect = 1.488e-33 Identity = 86/264 (32.58%), Postives = 145/264 (54.92%), Query Frame = 0
Query: 449 EPRVHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKA 712
+P V + + G +A D A+ +F+ VE+G+ PD S+LI + D+AL++ M+E G+ P++VT + +D K + +E L+LF EE+ G+ P++ +Y L++ K G+L EAL LFEE V G++P++ Y +I K + AL L + + G+ PD YNTL+ G K + +A+++ M KG+ PD +TY+ L+ L +L+ A L+ EM +KG +KP+ Y V+ + +A
Sbjct: 153 KPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLF-EEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDELTYRRVVESYCRA 414 HSP 6 Score: 133.65 bits (335), Expect = 1.773e-29 Identity = 82/256 (32.03%), Postives = 133/256 (51.95%), Query Frame = 0
Query: 449 EPRVHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMR--DKGHVKPNLELY 702
+P V + + G +A D A+ +F+ VE+G+ P+ S+LI + D+AL++ M+E G+ P++VT N +D K + +E L+LF EE+ G+ PD+ +Y L++ K G+L EAL LFEE V G++P++ Y +I K + AL L + + G+ PD YNTL+ G K + +A+++ M KG+ PD LTY ++ + E A+ E+ D K LE Y
Sbjct: 188 KPDVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYSTLIDGLCKAGKLDEALKLFEEMVEKGIKPNVVTYNTLIDGLCKAGKLDEALKLF-EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSETDLDFDKKALEAY 442
BLAST of EWM24234.1 vs. NCBI_GenBank
Match: gi|1023176431|pdb|5I9G|C (Chain C, Crystal Structure Of Designed Pentatricopeptide Repeat Protein Dppr- U8c2 In Complex With Its Target Rna U8c2) HSP 1 Score: 203.756 bits (517), Expect = 1.769e-53 Identity = 124/397 (31.23%), Postives = 214/397 (53.90%), Query Frame = 0
Query: 452 VHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSGIHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRLLPNLETHQCLLE 848
V A + + RA + A+ +F +G+ P ++LI + D+AL++ M+E G+ PD+VT N +D K + +E L+LF EE+ G+ PD+ +Y L++ K G+L EAL LFEE V G++P++ Y +I K + AL L + + G+ PD YNTL+ G K + +A+++ M KG+ P +TY+ L+ L +L+ A L+ EM +KG +KP++ Y+ +D KAG +A+ +F+EM ++P++VTY L++ +AG AL + +EM K G+ DV + + + G L+ L +EM + GI +VV YN + G ++G+ + AL++ + EK + P+ T++ ++E
Sbjct: 16 VRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLF-EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK-GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVE 409 HSP 2 Score: 201.83 bits (512), Expect = 1.113e-52 Identity = 123/387 (31.78%), Postives = 206/387 (53.23%), Query Frame = 0
Query: 450 PRVHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSGIHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRL 836
P V + + G +A D A+ +F+ VE+G+ PD ++LI + D+AL++ M+E G+ PD+VT N +D K + +E L+LF EE+ G+ PD+ +Y L++ K G+L EAL LFEE V G++P++ Y +I K + AL L + + G+ P YNTL+ G K + +A+++ M KG+ P +TY+ L+ L +L+ A L+ EM +KG +KP++ Y+ +D KAG +A+ +F+EM ++P++VTY L++ +AG AL + +EM K G+ DV + + + G L+ L +EM + GI + + Y + + R+ R+E A LS + E L
Sbjct: 49 PTVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLF-EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK-GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSETDL 432 HSP 3 Score: 199.134 bits (505), Expect = 9.340e-52 Identity = 116/363 (31.96%), Postives = 200/363 (55.10%), Query Frame = 0
Query: 486 DAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSGIHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRLLPNLETHQCLLE 848
D ++++ A + ++ALE+ + GVAP +VT N +D K + +E L+LF EE+ G+ PD+ +Y L++ K G+L EAL LFEE V G++P++ Y +I K + AL L + + G+ PD YNTL+ G K + +A+++ M KG+ PD +TY+ L+ L +L+ A L+ EM +KG +KP++ Y+ +D KAG +A+ +F+EM ++P++VTY L++ +AG AL + +EM K G+ DV + + + G L+ L +EM + GI +VV YN + G ++G+ + AL++ + EK + P++ T+ L++
Sbjct: 15 DVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLF-EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEK-GIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLID 374 HSP 4 Score: 186.037 bits (471), Expect = 2.836e-47 Identity = 105/315 (33.33%), Postives = 174/315 (55.24%), Query Frame = 0
Query: 449 EPRVHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRK 763
+P V + + G +A D A+ +F+ VE+G+ PD ++LI + D+AL++ M+E G+ PD+VT N +D K + +E L+LF EE+ G+ PD+ +Y L++ K G+L EAL LFEE V G++P + Y +I K + AL L + + G+ P YNTL+ G K + +A+++ M KG+ PD +TY+ L+ L +L+ A L+ EM +KG +KP++ Y+ +D KAG +A+ +F+EM ++P++VTY L++ +AG AL + +EM K
Sbjct: 83 KPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLF-EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEK 395 HSP 5 Score: 145.206 bits (365), Expect = 2.285e-33 Identity = 86/264 (32.58%), Postives = 143/264 (54.17%), Query Frame = 0
Query: 449 EPRVHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKA 712
+P V + + G +A D A+ +F+ VE+G+ PD ++LI + D+AL++ M+E G+ P +VT N +D K + +E L+LF EE+ G+ P + +Y L++ K G+L EAL LFEE V G++P++ Y +I K + AL L + + G+ PD YNTL+ G K + +A+++ M KG+ PD +TY+ L+ L +L+ A L+ EM +KG +KP+ Y V+ + +A
Sbjct: 153 KPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLF-EEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKG-IKPDELTYRRVVESYCRA 414 HSP 6 Score: 130.568 bits (327), Expect = 1.965e-28 Identity = 81/256 (31.64%), Postives = 131/256 (51.17%), Query Frame = 0
Query: 449 EPRVHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMR--DKGHVKPNLELY 702
+P V + + G +A D A+ +F+ VE+G+ P ++LI + D+AL++ M+E G+ P +VT N +D K + +E L+LF EE+ G+ PD+ +Y L++ K G+L EAL LFEE V G++P++ Y +I K + AL L + + G+ PD YNTL+ G K + +A+++ M KG+ PD LTY ++ + E A+ E+ D K LE Y
Sbjct: 188 KPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAGKLDEALKLF-EEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSETDLDFDKKALEAY 442
BLAST of EWM24234.1 vs. NCBI_GenBank
Match: gi|1200537766|gb|OUW49982.1| (hypothetical protein CBD47_00860 [Synechococcus sp. TMED187]) HSP 1 Score: 207.608 bits (527), Expect = 6.492e-52 Identity = 225/828 (27.17%), Postives = 366/828 (44.20%), Query Frame = 0
Query: 208 FEVTIQKPLGIFMSEGEADVGAPTISEVRLGSNADKAGLRVGDRIVAASATVGNKLWTKTTLVGVESAINSRF------------------RFSDDITFCVERTLAQDAG---DDSIASRQVEVFEVELERPVPL-------------EWMQENAEGGVFVRRVLKADCEALR-RIQPYDRVVAVSASLGDRMWRTNSLDGVLSALCTR--IGSKVRLQFERSPEVARLIARGAGNPGVGVADLVPP---LPPRPSMAAASLLS-------------PPSTADLVAK----------GEMLLMGEPR-------VHAVLSQ----------------MAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAV----ACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDLEGIEN---LIQEMQDSG--IHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRLLPNLETHQCL-LEMPTPSTGGAVSGLAHGDGVESQMEEAREQLVMFYHAALKLLAEQKVRARVNLYVACLHACLRTDRLDLAAEVMALRRANTLQIFQLFKKHE 939
FEV +KPLG+ + E ++ V GS A + G+R GD IVA SA++G+++W K TL GVESAI +R R+ D + + E +L + G S S + E P P+ + E G V V++ A ++ D VVA SAS+GD MWR +S++G+ +A+ TR + VRL+ RS + R +L PP P R ++AA+L S P + AD + + G M ++ + V AVL + M ALRA D LA+ +F V+ G P+A ++LIKA+G+ Q +A+ V++ M GV P + NAAM +G ++ LF + GL P + S+ ++ ++ K L E L EE + + P+ +Y + +A V++ + A L+ + +G+ DA + NTLL G+ K+L W++A++ + + G D L+YS LL V Q + R G PN +Y+L + A+ G+ ++A+ +F++M+ + V P T+ ALMEA + P A ++ +M K G+A DV + L+ +E L+++M G N + +N L G RS +++LAL +L + R+ P T L LE P+ A +G G + A E + F +++ E + +Y A L C RT + A ++A R L + + + E
Sbjct: 45 FEVACKKPLGLQLREKPGR--GVEVALVYEGSKAAQLGVRAGDLIVATSASLGSQMWEKKTLAGVESAIQTRVDGIVRLRLRRERAERWRSRWEDPVKYEYEVSLTRPIGLVLRPSSPSVALSAAATEAAAPEPVGAATAMGDSSAGGQSADERPPAGAEVAEVVEGGSAAASGAVRVGDVVVATSASVGDSMWRKSSVEGITAAISTRLSLSGSVRLRLSRSIRLGRW-----------AVELDPPPSGQPRRRRLSAAALSSYRQQLGELRSAPLPVALADAIRRICARAVRPPLGRMPIVADGERGADARAVCAVLRRLRSARVALDARLANGLMGTALRADDAQLALRVFDELVDGGGAPNAQVFTTLIKAHGVAGQRQEAVAVLQRMRAQGVPPTVRAYNAAMAVRARGGDRRGMMELF-AAISADGLRPTVASWNAVL-LFCKEQRLPE---LAEEVLRRMRRAAMTPDAFSYACVTQACVQRGRLERARELVDEMQAAGIPADAFILNTLLGGYAKQLRWTEALRTFNKLTSGGTAADLLSYSLLLRACVRARQPAQGAVVLERARAAGFA-PNARMYTLLLAAHAQEGEVSEALELFQQMQASGVPPTRHTFGALMEACIVVRQPAPAQALFAQM-EKAGIAADVVTHTLLLRALATHPTRSSLERGVALLEQMSAEGGDATPNALSFNALLDGCARSAQHDLALVLLRRMLRMRVSPTRRTFSHLALE---PAAMAAANGGGGAAGSSAGSTAAAESQLRFLLDVVEIFEEYRRPLGGAVYSALLRCCTRTGEVQTAEALVAKRHGGRLVVLRRAEMEE 849
BLAST of EWM24234.1 vs. NCBI_GenBank
Match: gi|551540996|ref|XP_005758827.1| (hypothetical protein EMIHUDRAFT_53066, partial [Emiliania huxleyi CCMP1516] >gi|485606664|gb|EOD06398.1| hypothetical protein EMIHUDRAFT_53066, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 180.644 bits (457), Expect = 1.128e-45 Identity = 119/370 (32.16%), Postives = 199/370 (53.78%), Query Frame = 0
Query: 471 AISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSGIHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRLLPNL 840
A+S+ + G+ P+ ++ I A + D+AL ++R M ++GV PD+++ +AA+ ACEK R +E L L RE +P G+ P+ +SY ++ K G EA++L E A GL P + +Y+A I A K AL+LLR + D+GLSP+ YN + K +A+ +LR M G+ PD ++Y+ +S + A SL REM G V+P++ YS A+ KA +A+++ +EM RVQP++++Y A + + +AG ALS+ EM GL+ + S + + G +L++EM +G+ NV+ YN + ++GR + AL +LS + E + P++
Sbjct: 64 ALSLLREMPGAGVQPNVISYNAAISACEKAGRCDEALSLLREMPDVGVQPDVISYSAAISACEKAGRCDEALSLLRE-MPGAGVQPNEYSYNAAISACEKAGRWEEAVSLLREMPAAGLRPNVVSYSAAISACEKAGRCDEALSLLREMPDAGLSPNVISYNAAISACEKAGRCDEALSLLREMPGAGVQPDVISYNAAISACEKAGRGNEALSLLREMPSAG-VQPDVISYSAAISACEKASRCDEALSLLREMPGARVQPDVISYNAAISSCEKAGRCNEALSLLREMP-DAGLSPNEYSYNAAISACEKAGRCNEALSLLREMPGAGLTPNVISYNAAISACEKAGRCDEALSLLSKMQEDGVQPDV 430 HSP 2 Score: 169.859 bits (429), Expect = 5.997e-42 Identity = 112/363 (30.85%), Postives = 187/363 (51.52%), Query Frame = 0
Query: 482 GLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSGIHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRLLPNLETHQ 844
G P+ S LI K A+ ++R M GV P++++ NAA+ CEK + ++ L L RE +P G+ P++ SY ++ K G EAL+L E G++P++ +Y+A I A K AL+LLR + +G+ P+ YN + K W +A+ +LR M A GL P+ ++YS +S + + A SL REM D G + PN+ Y+ A+ KAG +A+++ +EM VQP++++Y A + A +AG ALS+ EM G+ DV S + + + +L++EM + + +V+ YN + ++GR AL +L + + L PN ++
Sbjct: 5 GCEPNVFSYSILINLCARSKDWKTAVSLLREMPNAGVQPNVISYNAAISVCEKASQWKKALSLLRE-MPGAGVQPNVISYNAAISACEKAGRCDEALSLLREMPDVGVQPDVISYSAAISACEKAGRCDEALSLLREMPGAGVQPNEYSYNAAISACEKAGRWEEAVSLLREMPAAGLRPNVVSYSAAISACEKAGRCDEALSLLREMPDAG-LSPNVISYNAAISACEKAGRCDEALSLLREMPGAGVQPDVISYNAAISACEKAGRGNEALSLLREMPSA-GVQPDVISYSAAISACEKASRCDEALSLLREMPGARVQPDVISYNAAISSCEKAGRCNEALSLLREMPDAGLSPNEYSYN 364 HSP 3 Score: 148.673 bits (374), Expect = 9.336e-35 Identity = 99/324 (30.56%), Postives = 170/324 (52.47%), Query Frame = 0
Query: 449 EPRVHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTS 772
+P V + + ++ +A D A+S+ + G+ P+ + ++ I A + ++A+ ++R M G+ P++V+ +AA+ ACEK R +E L L RE +P GL P++ SY ++ K G EAL+L E G++P++ +Y A I A K AL+LLR + +G+ PD Y+ + K +A+ +LR M + PD ++Y+ +S + A SL REM D G + PN Y+ A+ KAG +A+++ +EM + PN+++Y A + A +AG ALS+ +M+ G+ DV S
Sbjct: 112 QPDVISYSAAISACEKAGRCDEALSLLREMPGAGVQPNEYSYNAAISACEKAGRWEEAVSLLREMPAAGLRPNVVSYSAAISACEKAGRCDEALSLLRE-MPDAGLSPNVISYNAAISACEKAGRCDEALSLLREMPGAGVQPDVISYNAAISACEKAGRGNEALSLLREMPSAGVQPDVISYSAAISACEKASRCDEALSLLREMPGARVQPDVISYNAAISSCEKAGRCNEALSLLREMPDAG-LSPNEYSYNAAISACEKAGRCNEALSLLREMPGAGLTPNVISYNAAISACEKAGRCDEALSLLSKMQED-GVQPDVIS 432 HSP 4 Score: 145.206 bits (365), Expect = 1.570e-33 Identity = 86/267 (32.21%), Postives = 147/267 (55.06%), Query Frame = 0
Query: 471 AISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTY 737
A+S+ + GL P+ S+ I A + D+AL ++R M + G++P++++ NAA+ ACEK R +E L L R E+P G+ PD+ SY ++ K G EAL+L E + G++P++ +Y+A I A K AL+LLR + + + PD YN + K ++A+ +LR M GL P+ +Y+ +S + A SL REM G + PN+ Y+ A+ KAG +A+++ +M+ + VQP+++++
Sbjct: 169 AVSLLREMPAAGLRPNVVSYSAAISACEKAGRCDEALSLLREMPDAGLSPNVISYNAAISACEKAGRCDEALSLLR-EMPGAGVQPDVISYNAAISACEKAGRGNEALSLLREMPSAGVQPDVISYSAAISACEKASRCDEALSLLREMPGARVQPDVISYNAAISSCEKAGRCNEALSLLREMPDAGLSPNEYSYNAAISACEKAGRCNEALSLLREMPGAG-LTPNVISYNAAISACEKAGRCDEALSLLSKMQEDGVQPDVISF 433 HSP 5 Score: 107.842 bits (268), Expect = 4.498e-21 Identity = 68/217 (31.34%), Postives = 111/217 (51.15%), Query Frame = 0
Query: 450 PRVHAVLSQMAGALRARDPDLAISIFKLAVERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTY 666
P V + + ++ +A D A+S+ + G+ PD ++ I A + ++AL ++R M GV PD+++ +AA+ ACEK R +E L L RE +P + PD+ SY ++ K G EAL+L E GL P +Y A I A K AL+LLR + +GL+P+ YN + K +A+ +L M+ G+ PD +++
Sbjct: 218 PNVISYNAAISACEKAGRCDEALSLLREMPGAGVQPDVISYNAAISACEKAGRGNEALSLLREMPSAGVQPDVISYSAAISACEKASRCDEALSLLRE-MPGARVQPDVISYNAAISSCEKAGRCNEALSLLREMPDAGLSPNEYSYNAAISACEKAGRCNEALSLLREMPGAGLTPNVISYNAAISACEKAGRCDEALSLLSKMQEDGVQPDVISF 433 HSP 6 Score: 83.1889 bits (204), Expect = 4.835e-13 Identity = 57/190 (30.00%), Postives = 98/190 (51.58%), Query Frame = 0
Query: 654 MEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDLEGIENLIQEMQDSGIHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRLLPNLETH 843
M G P+ +YS L++ + A SL REM + G V+PN+ Y+ A+ + KA +A+++ +EM VQPN+++Y A + A +AG ALS+ EM G+ DV S + + G + +L++EM +G+ N YN + ++GR+E A+ +L + L PN+ ++
Sbjct: 1 MRQAGCEPNVFSYSILINLCARSKDWKTAVSLLREMPNAG-VQPNVISYNAAISVCEKASQWKKALSLLREMPGAGVQPNVISYNAAISACEKAGRCDEALSLLREM-PDVGVQPDVISYSAAISACEKAGRCDEALSLLREMPGAGVQPNEYSYNAAISACEKAGRWEEAVSLLREMPAAGLRPNVVSY 188
BLAST of EWM24234.1 vs. NCBI_GenBank
Match: gi|551664760|ref|XP_005835143.1| (hypothetical protein GUITHDRAFT_86178 [Guillardia theta CCMP2712] >gi|428179291|gb|EKX48163.1| hypothetical protein GUITHDRAFT_86178 [Guillardia theta CCMP2712]) HSP 1 Score: 181.8 bits (460), Expect = 6.417e-45 Identity = 137/478 (28.66%), Postives = 233/478 (48.74%), Query Frame = 0
Query: 483 LTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLF---REEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILRLMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGDTTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDEMRRKPGLARDVTSCVWRLKCFVELGDL-EGIENLIQEMQDSGIHLNVVVYNQYLRGAMRSGRYELALQILSALFEKRLLPNLETHQCLLEMPTPSTGGAVSGLAHGDGVESQMEEAREQLVMFYHA-ALKLLAEQKVRARVNLYVACLHACLRTDRLDLAAEVMALRRANTLQIFQLFKKHEEKVHRWERKIDRELDA 955
L P HC +LIKAYG Q + A E + M++ G AP + +NA + AC + LF R L P S+ ++VN Y +R ++ +A + E G +P+ YT ++KA V A LL + + G+ P+A YN +L+G ++L+W KA ++L+ ME G+ + L+YSY + V +++ A +L+ EMR KG V PNL + + + +A G +A I K ++ R++ N +T+++L+EAF+ AGY A+ + +M + G+ D+ LK + +G + E IE L + ++++ ++ ++ L + G E AL++L + R+ P+ T Q L S+ME+ + ++ Y + LL VR LY+A L A L +LA V+ R L F + K+ EE+ + E ++ L A
Sbjct: 29 LRPSVHCYGTLIKAYGQLGQLEAAFETLNGMVKGGPAPSIRVINALLQACVRAGNLTAAQTLFSSLRGAGLCISLQPTGVSFNIMVNAYARRRKVEKAFKMLLEMRRAGCKPDQITYTTLVKACVAAGQFDRAERLLGEMEELGIPPNAYSYNCILYGLAQKLQWGKATRLLQRMEEDGVEANLLSYSYCILACVRARRMKEASALFEEMRRKGIV-PNLFVMNTMMSGYAAKGMVDEAQGIMKLLQDMRIKANAMTFSSLIEAFINAGYADKAVEVKRKM-EELGVEVDMVVSTQMLKAYTSMGKVEEAIEKLEEIVKEASSPVSSRTFDSVLFQCSKRGSKEEALRVLGLMLRSRVTPSRTTCQLL----------------------SRMEKLQGSILTQYLLDVISLLRSHSVRPPGPLYLAVLRASLDAGETELATMVVEER---ILGKFSVSKQDEEEAEKLEMRMMNLLQA 479 HSP 2 Score: 66.6254 bits (161), Expect = 1.510e-7 Identity = 66/284 (23.24%), Postives = 132/284 (46.48%), Query Frame = 0
Query: 480 ERGLTPDAHCCSSLIKAYGMKKQADKALEVVRMMLELGVAPDLVTLNAAMDACEKGKRPEEVLRLFREEVPRHGLVPDIFSYTVLVNMYGKRGELAEALALFEEAVACGLEPELPAYTAIIKAAVKKDDMGTALALLRRVFDSGLSPDARLYNTLLWGHTKRLEWSKAMQILR--LMEAKGLVPDRLTYSYLLSCLVDCNQLEVAQSLWREMRDKGHVKPNLELYSLAVDMFAKAGD--TTQAVTIFKEMRRNRVQPNLVTYTALMEAFVRAGYPMAALSISDE 759
E G+ P+A+ + ++ K Q KA +++ M E GV +L++ + + AC + +R +E LF EE+ R G+VP++F +++ Y +G + EA + + ++ ++++I+A + A+ + R++ + G+ D + +L +T + +A++ L + EA V R S L C ++ E + L +R + V P+ L M G T + + +R + V+P Y A++ A + AG A + +E
Sbjct: 170 ELGIPPNAYSYNCILYGLAQKLQWGKATRLLQRMEEDGVEANLLSYSYCILACVRARRMKEASALF-EEMRRKGIVPNLFVMNTMMSGYAAKGMVDEAQGIMKLLQDMRIKANAMTFSSLIEAFINAGYADKAVEVKRKMEELGVEVDMVVSTQMLKAYTSMGKVEEAIEKLEEIVKEASSPVSSRTFDSVLFQCSKRGSKEEALRVLGLMLRSR--VTPSRTTCQLLSRMEKLQGSILTQYLLDVISLLRSHSVRPPGPLYLAVLRASLDAGETELATMVVEE 450 The following BLAST results are available for this feature:
BLAST of EWM24234.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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