EWM24246.1, cds6437 (CDS) Nannochloropsis gaditana

Overview
NameEWM24246.1
Unique Namecds6437
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:538266..539528 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM24246.1
Producttranscription factor iie
Orig transcript idgnl|cribi|Naga_100020g24.5379.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:538266..539528 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0006367transcription initiation from RNA polymerase II promoter
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR017919TFIIE/TFIIEa_HTH
IPR011991WHTH_DNA-bd_dom
IPR024550TFIIEa/SarR/Rpc3_HTH_dom
IPR013083Znf_RING/FYVE/PHD
IPR002853TFIIE_asu
Homology
BLAST of EWM24246.1 vs. NCBI_GenBank
Match: gi|585105637|gb|EWM24246.1| (transcription factor iie [Nannochloropsis gaditana])

HSP 1 Score: 859.366 bits (2219), Expect = 0.000e+0
Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 0
Query:    1 MLGSAASGVANDAKRTSNHTSSKVSGAGGGNPLELAKRLVRAVARAFYADDTVVVLDALLRDRHVKDTDIDTRLGVGAKQARRLLTELLEERLIKTEDIVDELTGKRELFYYIDFSHFTNVVRYRIHLMQRELERMEREANDNQTYECPVCGRALPLLEVQPLRNKRYGFCCPTCCSSELHATCEGSQWQLRPKTGVTGFEEVQALKEKMRAQMYGAASETSAALHDGIYNLLSALEHKPLPSNLPSELIAVGVGGLPAGGTELQRRRREGAGGGTGGHAGGSSIGIFEDLAASTRDGGIQADEETGETTPSLVRPARAQPSFLQGSRVIKEVADPLQHETRKPQATGNEVADGLFMHKVEEEAKHVDVYRQAYAEAFKRGVGVETIEKSIKVERDDGGLDGSEGIEAVEEEDVDWEEGE 420
            MLGSAASGVANDAKRTSNHTSSKVSGAGGGNPLELAKRLVRAVARAFYADDTVVVLDALLRDRHVKDTDIDTRLGVGAKQARRLLTELLEERLIKTEDIVDELTGKRELFYYIDFSHFTNVVRYRIHLMQRELERMEREANDNQTYECPVCGRALPLLEVQPLRNKRYGFCCPTCCSSELHATCEGSQWQLRPKTGVTGFEEVQALKEKMRAQMYGAASETSAALHDGIYNLLSALEHKPLPSNLPSELIAVGVGGLPAGGTELQRRRREGAGGGTGGHAGGSSIGIFEDLAASTRDGGIQADEETGETTPSLVRPARAQPSFLQGSRVIKEVADPLQHETRKPQATGNEVADGLFMHKVEEEAKHVDVYRQAYAEAFKRGVGVETIEKSIKVERDDGGLDGSEGIEAVEEEDVDWEEGE
Sbjct:    1 MLGSAASGVANDAKRTSNHTSSKVSGAGGGNPLELAKRLVRAVARAFYADDTVVVLDALLRDRHVKDTDIDTRLGVGAKQARRLLTELLEERLIKTEDIVDELTGKRELFYYIDFSHFTNVVRYRIHLMQRELERMEREANDNQTYECPVCGRALPLLEVQPLRNKRYGFCCPTCCSSELHATCEGSQWQLRPKTGVTGFEEVQALKEKMRAQMYGAASETSAALHDGIYNLLSALEHKPLPSNLPSELIAVGVGGLPAGGTELQRRRREGAGGGTGGHAGGSSIGIFEDLAASTRDGGIQADEETGETTPSLVRPARAQPSFLQGSRVIKEVADPLQHETRKPQATGNEVADGLFMHKVEEEAKHVDVYRQAYAEAFKRGVGVETIEKSIKVERDDGGLDGSEGIEAVEEEDVDWEEGE 420          
BLAST of EWM24246.1 vs. NCBI_GenBank
Match: gi|953495071|emb|CEG42978.1| (transcription factor iie [Plasmopara halstedii])

HSP 1 Score: 135.961 bits (341), Expect = 8.035e-32
Identity = 119/415 (28.67%), Postives = 183/415 (44.10%), Query Frame = 0
Query:   35 LAKRLVRAVARAFYADDTVVVLDALLRDRHVKDTDIDTRLGVGAKQARRLLTELLEERLIKTEDIVDELTG--KRELFYYIDFSHFTNVVRYRIHLMQRELERMEREANDNQTYEC--PVCGRALPLLEVQPLRNK-RYGFCCPTCCSSELHATCEGSQWQLRPKTGVTGFEEVQALKEKMRAQMYGAASETSAALHDGIYNLLSAL-----EHKPLPSNLPSELIAVGVGGLPAGGTELQRRR------REGAGGGTGGHAGGSSI---------GIFEDLAASTR---DGGIQAD-EETGETTPSLVRPARAQPSFLQGSRVIKEVADPLQHETRKPQATGNEVADGLFMHKVEEEAKH----VDVYRQAYAEAFKRGVGVE-------TIEKSIKVERDDGGLDGSEGIEAV 409
            L ++LV  V RAFY+D+ VVVL AL+R++ +KD D+   + +  +Q R+++ EL ++ L+  E + D+  G      ++YID+ +F +VV+YR++LM   L+  E+   + QT++C  P CGR    LE Q L    ++ F C  C  +EL   C+ +   LR          +Q L+ K + QM           HDGIY +L  +     E   LP+NLPSE  A G+GG     T              G+G   G      S           I  D+A + +   D     D +E  E     V   RA P FLQGS +   +A       +  Q+  +   D     K   +  H     D+  +   EAFKR    E         E  ++++ D  G D     +A+
Sbjct:    4 LVEKLVYLVGRAFYSDEHVVVLGALMREKFLKDDDMGNAMNLQTRQVRKIMNELHQDNLVCEEVLNDKRVGGSSSTSYWYIDYKYFVDVVQYRLYLMHEHLKDSEQLEIERQTFQCSDPECGREYTALEAQLLLMPGQFQFRCGHC--NELLLECDNNDRLLR----------IQNLQRKFKDQM-----NKQKGNHDGIYEVLRRIGDFVKEGHALPNNLPSENRAAGLGGTSTRSTTSGGSGNRGGGANHGSGSNRGDDQNSKSYLYPYGSQDQEIIVDIAGTNQAEDDYLTSRDRKEDKEVASQQVAAPRALPEFLQGSSISGHMA------AKHLQSVDSITDDSSISMKTTLKGVHSPSQSDMTEEERQEAFKRAYMAELERYNEDKYEGEVQIQVDKQGWDAEMNDDAM 395          
BLAST of EWM24246.1 vs. NCBI_GenBank
Match: gi|695409987|ref|XP_009525065.1| (hypothetical protein PHYSODRAFT_299693 [Phytophthora sojae] >gi|348682532|gb|EGZ22348.1| hypothetical protein PHYSODRAFT_299693 [Phytophthora sojae])

HSP 1 Score: 134.806 bits (338), Expect = 1.560e-31
Identity = 117/404 (28.96%), Postives = 186/404 (46.04%), Query Frame = 0
Query:   35 LAKRLVRAVARAFYADDTVVVLDALLRDRHVKDTDIDTRLGVGAKQARRLLTELLEERLIKTEDIVDELTG--KRELFYYIDFSHFTNVVRYRIHLMQRELERMEREANDNQTYEC--PVCGRALPLLEVQPLRNK-RYGFCCPTCCSSELHATCEGSQWQLRPKTGVTGFEEVQALKEKMRAQMYGAASETSAALHDGIYNLLSAL-----EHKPLPSNLPSELIAVGVGGLPAGGTE---------------LQRRRREGAGGGTGGHAGGSSIGIFEDLAASTR--DGGIQADE--ETGETTPSLVRPARAQPSFLQGSRVIKEV-ADPLQ------HETRKPQATGNEVADGLFMHKVEEEAKHVDVYRQAYAEAFKRGVGVETIEKSIKVERDDGGLDG 402
            L ++LV  V RAFY+D+ VVVL AL+R++ +KD ++   + +  +Q R+++ EL ++ L+  E + D+  G      ++YID+ +F +VV+YR++LM   L+  E+   + QT++C  P CGR    LE Q L    +Y F C  C  +EL   C+ +   LR          +Q+L+ K + QM          +H+GIY +L  +     E   LPSNLPS+  A G+GG  A                        RE          G     I  D+A + +  D  + + E  E  E     V   RA P FLQGS +   + A  LQ       E   P  +G +  D L   ++ EE +  + +++AY    +R        + ++V+ D  G D 
Sbjct:    4 LVEKLVNLVGRAFYSDEHVVVLSALIREKFMKDDEMGNAVNLQTRQVRKIMNELHQDNLVCEEVLNDKRLGGSSSTSYWYIDYKYFVDVVQYRLYLMHEHLKDSEQLEIERQTFQCSDPECGREYTALEAQLLLMPGQYQFRCGHC--NELLLECDNNDRLLR----------IQSLQRKFKDQM-----NKQNGMHEGIYEVLRRIGDFVKEGHALPSNLPSDNRAAGIGGNSARAANGGGGGRGGGGGGGGGGGGGNREQNSQSYLYPYGSQDQEIIVDIAGNDQAEDEYLASRERKEDKEAANQQVAAPRALPEFLQGSSISGHMAAKHLQPAAAAVEEKAIPMESGIQGVDPLTQSEMTEEQRQ-EAFKRAYMAELERYNEENHDGEEVQVQVDKQGWDA 389          
BLAST of EWM24246.1 vs. NCBI_GenBank
Match: gi|566019989|gb|ETI42900.1| (hypothetical protein F443_12067 [Phytophthora parasitica P1569] >gi|568045672|gb|ETM42812.1| hypothetical protein L914_11615 [Phytophthora parasitica])

HSP 1 Score: 130.183 bits (326), Expect = 6.946e-30
Identity = 119/402 (29.60%), Postives = 186/402 (46.27%), Query Frame = 0
Query:   35 LAKRLVRAVARAFYADDTVVVLDALLRDRHVKDTDIDTRLGVGAKQARRLLTELLEERLIKTEDIVDELTG--KRELFYYIDFSHFTNVVRYRIHLMQRELERMEREANDNQTYEC--PVCGRALPLLEVQPLRNK-RYGFCCPTCCSSELHATCEGSQWQLRPKTGVTGFEEVQALKEKMRAQMYGAASETSAALHDGIYNLLSAL-----EHKPLPSNLPSELIAVGVGGLPAGGTELQRRRREGAGGGTGGHA---------------GGSSIGIFEDLAASTR--DGGIQADE--ETGETTPSLVRPARAQPSFLQGSRV-----IKEVADPLQHETRKPQATGNEVADGLFMHKVEEEAKHVDVYRQAYAEAFKRGVGVETIEKSIKVERDDGGLDG 402
            L ++LV  V RAFY+D+ VVVL AL+R++ +KD ++   + +  +Q R+++ EL ++ L+  E + D+  G      ++YID+ +F +VV+YR++LM   L+  E+   + QT++C  P CGR    LE Q L    +Y F C  C  +EL   C+ +   LR          +Q L+ K + QM          +H+GIY +L  +     E   LPSNLPS+  A G+GG  A           G GGG G                  G     I  D+A + +  D  + + E  E  E     V   RA P FLQGS +      K +   +  E      T  +  D L   ++ EE +  + +++AY    +R    E  E  ++V+ D  G D 
Sbjct:    4 LVEKLVNLVGRAFYSDEHVVVLSALIREKFMKDDEMGNAVNLQTRQVRKIMNELHQDNLVCEEVLNDKRLGGSSSTSYWYIDYKYFVDVVQYRLYLMHEHLKDSEQLEIERQTFQCSDPECGREYTALEAQLLLMPGQYQFRCGHC--NELLLECDNNDRLLR----------IQNLQRKFKDQM-----NKQNGMHEGIYEVLRRIGDFVKEGHTLPSNLPSDNRAAGLGGTSARANASNGGGGRGGGGGGGSGGSRGDDQNSQSYLYPYGAQDQEIIVDIAGNDQAEDEYLTSRERKEDKEAANQQVAAPRALPEFLQGSSISGHMAAKHLQPAVADEKPIAMETSLQGVDPLTQSEMTEEQRQ-EAFKRAYMAELER-YNEENHEGEVQVQVDKQGWDA 386          
BLAST of EWM24246.1 vs. NCBI_GenBank
Match: gi|635361647|emb|CCI49461.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 130.183 bits (326), Expect = 7.395e-30
Identity = 81/232 (34.91%), Postives = 130/232 (56.03%), Query Frame = 0
Query:   35 LAKRLVRAVARAFYADDTVVVLDALLRDRHVKDTDIDTRLGVGAKQARRLLTELLEERLIKTEDIVDE-LTGKREL-FYYIDFSHFTNVVRYRIHLMQRELERMEREANDNQTYEC--PVCGRALPLLEVQPLRNK-RYGFCCPTCCSSELHATCEGSQWQLRPKTGVTGFEEVQALKEKMRAQMYGAASETSAALHDGIYNLLSAL-----EHKPLPSNLPSELIAVGVGG 256
            L ++LV  V RAFY+D+ VVVL ALLR++ +KD ++   + +  +Q R+++ EL +++LI  + + D+ L G   + ++YID+ +F +VV+YR+++M   L+  E+   + QT++C  P CGR    LE Q L    +Y F C  C   E+   C+ +             E++Q L+ K + QM        + +HDGIY LL  +     E   LPSNLPS+  A G+GG
Sbjct:    4 LVEKLVNLVGRAFYSDEHVVVLRALLREKFMKDDEMGNAVNLQTRQVRKIVNELHQDQLICVQVLNDKRLGGSSSMSYWYIDYKYFVDVVQYRLYVMHERLKENEQLEIERQTFQCKDPDCGREYTALEAQLLLMPGQYQFRCGHC--GEILNECDNN----------DRLEKIQNLQRKFKDQM-----NKQSGMHDGIYELLRRIGDFVREGHALPSNLPSDNRAAGIGG 218          
BLAST of EWM24246.1 vs. NCBI_GenBank
Match: gi|570323585|gb|ETO71533.1| (hypothetical protein F444_12163 [Phytophthora parasitica P1976])

HSP 1 Score: 129.798 bits (325), Expect = 9.640e-30
Identity = 120/401 (29.93%), Postives = 186/401 (46.38%), Query Frame = 0
Query:   35 LAKRLVRAVARAFYADDTVVVLDALLRDRHVKDTDIDTRLGVGAKQARRLLTELLEERLIKTEDIVDELTG--KRELFYYIDFSHFTNVVRYRIHLMQRELERMEREANDNQTYEC--PVCGRALPLLEVQPLRNK-RYGFCCPTCCSSELHATCEGSQWQLRPKTGVTGFEEVQALKEKMRAQMYGAASETSAALHDGIYNLLSAL-----EHKPLPSNLPSELIAVGVGGLPAGGTELQRRRREGAGGGTGGHA---------------GGSSIGIFEDLAAS--TRDGGIQADE--ETGETTPSLVRPARAQPSFLQGSRV-----IKEVADPLQHETRKPQATGNEVADGLFMHKVEEEAKHVDVYRQAYAEAFKRGVGVETIEKSIKVERDDGGLD 401
            L ++LV  V RAFY+D+ VVVL AL+R++ +KD ++   + +  +Q R+++ EL ++ L+  E + D+  G      ++YID+ +F +VV+YR++LM   L+  E+   + QT++C  P CGR    LE Q L    +Y F C  C  +EL   C+ +   LR          +Q L+ K + QM          +H+GIY +L  +     E   LPSNLPS+  A G+GG  A           G GGG GG                 G     I  D+A +    D  + + E  E  E     V   RA P FLQGS +      K +   +  E      T  +  D L   ++ EE +  + +++AY    +R    E  E  ++V+ D  G D
Sbjct:    4 LVEKLVNLVGRAFYSDEHVVVLSALIREKFMKDDEMGNAVNLQTRQVRKIMNELHQDNLVCEEVLNDKRLGGSSSTSYWYIDYKYFVDVVQYRLYLMHEHLKDSEQLEIERQTFQCSDPECGREYTALEAQLLLMPGQYQFRCGHC--NELLLECDNNDRLLR----------IQNLQRKFKDQM-----NKQNGMHEGIYEVLRRIGDFVKEGHTLPSNLPSDNRAAGLGGTSARANASNGGGGRGGGGGGGGGGSRGDDQNSQSYLYPYGAQDQEIIVDIAGNDHAEDEYLTSRERKEDKEAANQQVAAPRALPEFLQGSSISGHMAAKHLQPAVADEKPIAMETSLQGVDPLTQSEMTEEQRQ-EAFKRAYMAELER-YNEENHEGEVQVQVDKQGWD 385          
BLAST of EWM24246.1 vs. NCBI_GenBank
Match: gi|675198901|ref|XP_008908335.1| (hypothetical protein PPTG_13711 [Phytophthora parasitica INRA-310] >gi|568015348|gb|ETL89525.1| hypothetical protein L917_11569 [Phytophthora parasitica] >gi|568091545|gb|ETN06366.1| hypothetical protein PPTG_13711 [Phytophthora parasitica INRA-310] >gi|570979917|gb|ETP40749.1| hypothetical protein F442_11978 [Phytophthora parasitica P10297])

HSP 1 Score: 129.798 bits (325), Expect = 9.931e-30
Identity = 120/402 (29.85%), Postives = 186/402 (46.27%), Query Frame = 0
Query:   35 LAKRLVRAVARAFYADDTVVVLDALLRDRHVKDTDIDTRLGVGAKQARRLLTELLEERLIKTEDIVDELTG--KRELFYYIDFSHFTNVVRYRIHLMQRELERMEREANDNQTYEC--PVCGRALPLLEVQPLRNK-RYGFCCPTCCSSELHATCEGSQWQLRPKTGVTGFEEVQALKEKMRAQMYGAASETSAALHDGIYNLLSAL-----EHKPLPSNLPSELIAVGVGGLPAGGTELQRRRREGAGGGTGGHA---------------GGSSIGIFEDLAAS--TRDGGIQADE--ETGETTPSLVRPARAQPSFLQGSRV-----IKEVADPLQHETRKPQATGNEVADGLFMHKVEEEAKHVDVYRQAYAEAFKRGVGVETIEKSIKVERDDGGLDG 402
            L ++LV  V RAFY+D+ VVVL AL+R++ +KD ++   + +  +Q R+++ EL ++ L+  E + D+  G      ++YID+ +F +VV+YR++LM   L+  E+   + QT++C  P CGR    LE Q L    +Y F C  C  +EL   C+ +   LR          +Q L+ K + QM          +H+GIY +L  +     E   LPSNLPS+  A G+GG  A           G GGG GG                 G     I  D+A +    D  + + E  E  E     V   RA P FLQGS +      K +   +  E      T  +  D L   ++ EE +  + +++AY    +R    E  E  ++V+ D  G D 
Sbjct:    4 LVEKLVNLVGRAFYSDEHVVVLSALIREKFMKDDEMGNAVNLQTRQVRKIMNELHQDNLVCEEVLNDKRLGGSSSTSYWYIDYKYFVDVVQYRLYLMHEHLKDSEQLEIERQTFQCSDPECGREYTALEAQLLLMPGQYQFRCGHC--NELLLECDNNDRLLR----------IQNLQRKFKDQM-----NKQNGMHEGIYEVLRRIGDFVKEGHTLPSNLPSDNRAAGLGGTSARANASNGGGGRGGGGGGGGGGSRGDDQNSQSYLYPYGAQDQEIIVDIAGNDHAEDEYLTSRERKEDKEAANQQVAAPRALPEFLQGSSISGHMAAKHLQPAVADEKPIAMETSLQGVDPLTQSEMTEEQRQ-EAFKRAYMAELER-YNEENHEGEVQVQVDKQGWDA 386          
BLAST of EWM24246.1 vs. NCBI_GenBank
Match: gi|567957333|gb|ETK82936.1| (hypothetical protein L915_11780 [Phytophthora parasitica] >gi|567985983|gb|ETL36315.1| hypothetical protein L916_11705 [Phytophthora parasitica] >gi|570947418|gb|ETP12675.1| hypothetical protein F441_12033 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 129.798 bits (325), Expect = 9.931e-30
Identity = 120/402 (29.85%), Postives = 186/402 (46.27%), Query Frame = 0
Query:   35 LAKRLVRAVARAFYADDTVVVLDALLRDRHVKDTDIDTRLGVGAKQARRLLTELLEERLIKTEDIVDELTG--KRELFYYIDFSHFTNVVRYRIHLMQRELERMEREANDNQTYEC--PVCGRALPLLEVQPLRNK-RYGFCCPTCCSSELHATCEGSQWQLRPKTGVTGFEEVQALKEKMRAQMYGAASETSAALHDGIYNLLSAL-----EHKPLPSNLPSELIAVGVGGLPAGGTELQRRRREGAGGGTGGHA---------------GGSSIGIFEDLAAS--TRDGGIQADE--ETGETTPSLVRPARAQPSFLQGSRV-----IKEVADPLQHETRKPQATGNEVADGLFMHKVEEEAKHVDVYRQAYAEAFKRGVGVETIEKSIKVERDDGGLDG 402
            L ++LV  V RAFY+D+ VVVL AL+R++ +KD ++   + +  +Q R+++ EL ++ L+  E + D+  G      ++YID+ +F +VV+YR++LM   L+  E+   + QT++C  P CGR    LE Q L    +Y F C  C  +EL   C+ +   LR          +Q L+ K + QM          +H+GIY +L  +     E   LPSNLPS+  A G+GG  A           G GGG GG                 G     I  D+A +    D  + + E  E  E     V   RA P FLQGS +      K +   +  E      T  +  D L   ++ EE +  + +++AY    +R    E  E  ++V+ D  G D 
Sbjct:    4 LVEKLVNLVGRAFYSDEHVVVLSALIREKFMKDDEMGNAVNLQTRQVRKIMNELHQDNLVCEEVLNDKRLGGSSSTSYWYIDYKYFVDVVQYRLYLMHEHLKDSEQLEIERQTFQCSDPECGREYTALEAQLLLMPGQYQFRCGHC--NELLLECDNNDRLLR----------IQNLQRKFKDQM-----NKQNGMHEGIYEVLRRIGDFVKEGHTLPSNLPSDNRAAGLGGTSARANASNGGGGRGGGGGGGGSGSRGDDQNSQSYLYPYGAQDQEIIVDIAGNDHAEDEYLTSRERKEDKEAANQQVAAPRALPEFLQGSSISGHMAAKHLQPAVADEKPIAMETSLQGVDPLTQSEMTEEQRQ-EAFKRAYMAELER-YNEENHEGEVQVQVDKQGWDA 386          
BLAST of EWM24246.1 vs. NCBI_GenBank
Match: gi|813147194|ref|XP_012199907.1| (hypothetical protein SPRG_05942 [Saprolegnia parasitica CBS 223.65] >gi|641535495|gb|KDO29405.1| hypothetical protein SPRG_05942 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 129.028 bits (323), Expect = 2.236e-29
Identity = 109/415 (26.27%), Postives = 183/415 (44.10%), Query Frame = 0
Query:   35 LAKRLVRAVARAFYADDTVVVLDALLRDRHVKDTDIDTRLGVGAKQARRLLTELLEERLIKTEDIVDELTG--KRELFYYIDFSHFTNVVRYRIHLMQRELERMEREANDNQTYECPV--CGRALPLLEVQPLRNKR-YGFCCPTCCSSELHATCEGSQWQLRPKTGVTGFEEVQALKEKMRAQMYGAASETSAALHDGIYNLLSALEH-----KPLPSNLPSELIAVGVGGLPAGGTELQRRRR---------------EGAGGGTGGHAGGSSIGIFEDLAASTRDGGIQADEETGETTPSLVRPARAQPSFLQGSRVIKEVADPLQH----ETRKPQATGNEVADGLFMHKVEEEAKHVDVYRQAYAEAFKRGVGVETIEKSIKVERDDGGLDGSEGIEAVEEEDVDWEEGE 420
            L ++LVR +ARAFY+D+ +VVL+ALLR+R +KD ++   + +  KQ R++  +L +E +I  E++ D+  G   +  ++YID+ HF NVVRYR++++   L+  E+   + QT+ C    CGR    LE Q L     Y F C  C             ++L         + ++ L  K + Q+          +HDGIY  L+ +       + LPSNLPSE  A G+GG        +                   E   G  G       +    + A       +  ++   E          A P F+ GS++   +A   +     E     A+   +  G+ M     EA   ++  +A+ EA+KR +       + +V  D   + G++ ++A  +ED D E+ E
Sbjct:    4 LVEKLVRLIARAFYSDEHIVVLEALLRERFLKDDEMGNAVNLQTKQVRKICHDLEKEDMISREELNDKKLGGASKATYWYIDYKHFVNVVRYRLYIIAHHLKESEQLEIERQTFRCSNDDCGREYTALEAQLLLTPDVYEFHCGHC------------NFKLVECDNNEKLQTIKGLLAKFKVQL-----NRQEDMHDGIYECLARISEWQNSGQALPSNLPSENRAAGIGGASTAKMNGRNGGGGGGGGGGPGGNRGGDEKTSGLYGKFEDAKIVIDIAENANQDEYSTLNPNKPKEEIKLQTANSGPAMPEFIMGSKMSDNMAAKYKKNAIPEVLATSASAASLNAGVSMGLSSREA---EMREEAFREAYKREMERYNEINAAEVVWD--SVSGNKWVDAASKEDDDLEDME 396          
BLAST of EWM24246.1 vs. NCBI_GenBank
Match: gi|669147736|ref|XP_008609430.1| (hypothetical protein SDRG_05492 [Saprolegnia diclina VS20] >gi|530739026|gb|EQC37268.1| hypothetical protein SDRG_05492 [Saprolegnia diclina VS20])

HSP 1 Score: 128.642 bits (322), Expect = 2.445e-29
Identity = 109/415 (26.27%), Postives = 183/415 (44.10%), Query Frame = 0
Query:   35 LAKRLVRAVARAFYADDTVVVLDALLRDRHVKDTDIDTRLGVGAKQARRLLTELLEERLIKTEDIVDELTG--KRELFYYIDFSHFTNVVRYRIHLMQRELERMEREANDNQTYECPV--CGRALPLLEVQPLRNKR-YGFCCPTCCSSELHATCEGSQWQLRPKTGVTGFEEVQALKEKMRAQMYGAASETSAALHDGIYNLLSALEH-----KPLPSNLPSELIAVGVGGLPAGGTELQRRRR---------------EGAGGGTGGHAGGSSIGIFEDLAASTRDGGIQADEETGETTPSLVRPARAQPSFLQGSRVIKEVADPLQH----ETRKPQATGNEVADGLFMHKVEEEAKHVDVYRQAYAEAFKRGVGVETIEKSIKVERDDGGLDGSEGIEAVEEEDVDWEEGE 420
            L ++LVR +ARAFY+D+ +VVL+ALLR+R +KD ++   + +  KQ R++  +L +E +I  E++ D+  G   +  ++YID+ HF NVVRYR++++   L+  E+   + QT+ C    CGR    LE Q L     Y F C  C             ++L         + ++ L  K + Q+          +HDGIY  L+ +       + LPSNLPSE  A G+GG        +                   E   G  G       +    + A       +  ++   E          A P F+ GS++   +A   +     E     A+   +  G+ M     EA   ++  +A+ EA+KR +       + +V  D   + G++ ++A  +ED D E+ E
Sbjct:    4 LVEKLVRLIARAFYSDEHIVVLEALLRERFLKDDEMGNAVNLQTKQVRKICHDLEKEDMISREELNDKKLGGASKATYWYIDYKHFVNVVRYRLYIIAHHLKESEQLEIERQTFRCSNDDCGREYTALEAQLLLTPDVYEFHCGHC------------NFKLVECDNNEKLQTIKGLLAKFKVQL-----NRQEDMHDGIYECLARISEWQNSGQALPSNLPSENRAAGIGGASTAKMNGRNGGGGGGGGGGPGGNRGGDEKTSGLYGKFEDAKIVIDIAENANQDEYSTLNPNKPKEEIKLQTANSGPAMPEFIMGSKMSDNMAAKYKKNAIPEVLATSASAASLNAGVSMGLSSREA---EMREEAFREAYKREMERYNEINAAEVVWD--SVSGNKWVDAASKEDEDLEDME 396          
The following BLAST results are available for this feature:
BLAST of EWM24246.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105637|gb|EWM24246.1|0.000e+0100.00transcription factor iie [Nannochloropsis gaditana... [more]
gi|953495071|emb|CEG42978.1|8.035e-3228.67transcription factor iie [Plasmopara halstedii][more]
gi|695409987|ref|XP_009525065.1|1.560e-3128.96hypothetical protein PHYSODRAFT_299693 [Phytophtho... [more]
gi|566019989|gb|ETI42900.1|6.946e-3029.60hypothetical protein F443_12067 [Phytophthora para... [more]
gi|635361647|emb|CCI49461.1|7.395e-3034.91unnamed protein product [Albugo candida][more]
gi|570323585|gb|ETO71533.1|9.640e-3029.93hypothetical protein F444_12163 [Phytophthora para... [more]
gi|675198901|ref|XP_008908335.1|9.931e-3029.85hypothetical protein PPTG_13711 [Phytophthora para... [more]
gi|567957333|gb|ETK82936.1|9.931e-3029.85hypothetical protein L915_11780 [Phytophthora para... [more]
gi|813147194|ref|XP_012199907.1|2.236e-2926.27hypothetical protein SPRG_05942 [Saprolegnia paras... [more]
gi|669147736|ref|XP_008609430.1|2.445e-2926.27hypothetical protein SDRG_05492 [Saprolegnia dicli... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6453rna6453Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications