EWM24267.1, cds6435 (CDS) Nannochloropsis gaditana

Overview
NameEWM24267.1
Unique Namecds6435
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:534767..536878 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24267.1
Productribosomal rna processing protein 1
Orig transcript idgnl|cribi|Naga_100020g26.5400.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:534767..536878 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0006364rRNA processing
Vocabulary: Cellular Component
TermDefinition
GO:0005575cellular_component
GO:0030688preribosome, small subunit precursor
Vocabulary: INTERPRO
TermDefinition
IPR010301Nop52
Homology
BLAST of EWM24267.1 vs. NCBI_GenBank
Match: gi|585105658|gb|EWM24267.1| (ribosomal rna processing protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 1430.23 bits (3701), Expect = 0.000e+0
Identity = 703/703 (100.00%), Postives = 703/703 (100.00%), Query Frame = 0
Query:    1 MGLMGRGGSSTRSTGKIRVPASTQVKKANDLCDPPFNEEVTAELASSGLEGSINGGKMLPEEEKEIIGFAKRLAANEKRERDQALKRLEVWMAKHKNLSEKDFLKIWKGLFYCMWMSDRARVQQDLGGAISRLVHCFGRDSGRAHLFVGAFYRTVRREWPGLDQHRLDKFYSFMRRMLRECLRFAQQRAWSAEALVSVVFPLNAEVLQQPWPNGLRLHACDLILPELARVGGGELTTAQALEVLQPFLVAMATSADRVVAERARARVLLDLVASKEAEGVEAGGKEDVDAVSCMAGVDMEAVQATVFGLASSSATRERYRAALYEAHKAFQKLTGKKRADPAKAIRVSFPVVEAGKGVLMGPQGTERGGGGGEAGDGEEGESCIDSGNGVKKRKAHAVLAEDRMKRERTGTVDSKTLSRGKEAVDLRDSKVLGATVTEKAVKGKAGVKKMMSMQKPAEKDGKSLEGMTQPTAKKKSIDLSSQKSKGESSASKRNADEEKAIAKSVTAKRLKADILGATGGNANPKRKSEGDDAPSEAARGSIAHKLSARKVEAETNKAEEASHLPAMRHSQAPGKANKKKDATASSTAPSPSNATTGKTEAAFIPSKTFTGGKPGYVYKKDRQGLGYYLDVGQRGGKKVRWGKVQVKLFNKDASPADGKRKTVSFMRESSGRVRGKTRVAGDKMGRGKGGGGPNNRRRAVSYF 703
            MGLMGRGGSSTRSTGKIRVPASTQVKKANDLCDPPFNEEVTAELASSGLEGSINGGKMLPEEEKEIIGFAKRLAANEKRERDQALKRLEVWMAKHKNLSEKDFLKIWKGLFYCMWMSDRARVQQDLGGAISRLVHCFGRDSGRAHLFVGAFYRTVRREWPGLDQHRLDKFYSFMRRMLRECLRFAQQRAWSAEALVSVVFPLNAEVLQQPWPNGLRLHACDLILPELARVGGGELTTAQALEVLQPFLVAMATSADRVVAERARARVLLDLVASKEAEGVEAGGKEDVDAVSCMAGVDMEAVQATVFGLASSSATRERYRAALYEAHKAFQKLTGKKRADPAKAIRVSFPVVEAGKGVLMGPQGTERGGGGGEAGDGEEGESCIDSGNGVKKRKAHAVLAEDRMKRERTGTVDSKTLSRGKEAVDLRDSKVLGATVTEKAVKGKAGVKKMMSMQKPAEKDGKSLEGMTQPTAKKKSIDLSSQKSKGESSASKRNADEEKAIAKSVTAKRLKADILGATGGNANPKRKSEGDDAPSEAARGSIAHKLSARKVEAETNKAEEASHLPAMRHSQAPGKANKKKDATASSTAPSPSNATTGKTEAAFIPSKTFTGGKPGYVYKKDRQGLGYYLDVGQRGGKKVRWGKVQVKLFNKDASPADGKRKTVSFMRESSGRVRGKTRVAGDKMGRGKGGGGPNNRRRAVSYF
Sbjct:    1 MGLMGRGGSSTRSTGKIRVPASTQVKKANDLCDPPFNEEVTAELASSGLEGSINGGKMLPEEEKEIIGFAKRLAANEKRERDQALKRLEVWMAKHKNLSEKDFLKIWKGLFYCMWMSDRARVQQDLGGAISRLVHCFGRDSGRAHLFVGAFYRTVRREWPGLDQHRLDKFYSFMRRMLRECLRFAQQRAWSAEALVSVVFPLNAEVLQQPWPNGLRLHACDLILPELARVGGGELTTAQALEVLQPFLVAMATSADRVVAERARARVLLDLVASKEAEGVEAGGKEDVDAVSCMAGVDMEAVQATVFGLASSSATRERYRAALYEAHKAFQKLTGKKRADPAKAIRVSFPVVEAGKGVLMGPQGTERGGGGGEAGDGEEGESCIDSGNGVKKRKAHAVLAEDRMKRERTGTVDSKTLSRGKEAVDLRDSKVLGATVTEKAVKGKAGVKKMMSMQKPAEKDGKSLEGMTQPTAKKKSIDLSSQKSKGESSASKRNADEEKAIAKSVTAKRLKADILGATGGNANPKRKSEGDDAPSEAARGSIAHKLSARKVEAETNKAEEASHLPAMRHSQAPGKANKKKDATASSTAPSPSNATTGKTEAAFIPSKTFTGGKPGYVYKKDRQGLGYYLDVGQRGGKKVRWGKVQVKLFNKDASPADGKRKTVSFMRESSGRVRGKTRVAGDKMGRGKGGGGPNNRRRAVSYF 703          
BLAST of EWM24267.1 vs. NCBI_GenBank
Match: gi|970658344|gb|KUF96119.1| (hypothetical protein AM588_10008175 [Phytophthora nicotianae])

HSP 1 Score: 195.667 bits (496), Expect = 1.762e-50
Identity = 105/270 (38.89%), Postives = 156/270 (57.78%), Query Frame = 0
Query:   69 FAKRLAANEKRERDQALKRLEVWMAKHKNLSEKDFLKIWKGLFYCMWMSDRARVQQDLGGAISRLVHCFGRDSGRAHLFVGAFYRTVRREWPGLDQHRLDKFYSFMRRMLRECLRFAQQRAWSAEALVSVVFPLNAEVLQQPWPNGLRLHACDLILPELARVGGGELTTAQALEVLQPFLVAMATSADRVVAERARARVLLDLVA--------SKEAEGVEAGGKEDVDAVSCMAGVDMEAVQATVFGLASSSATRERYRAALYEAHKAF 330
            F + LA  EK+ RD+ALK+L V++ K K  +E ++ K+WK LFYCMWMSD+  VQ++L   ++ LVH    ++  A  FV +F+RT+ REW GLD  RLDKFYS +R+ +RE +   + + W  + +   V  L+ EV+ Q  PNGLR+H  DL L E+    G E+TT   + +L+PF   +++  D+ V +R R  V  D++A         KE    E    ++ +       VD+  VQ  +F +AS+  T ER RAALY  +K F
Sbjct:    8 FGQHLAHTEKKYRDRALKKLTVYLTKKKEWTELEWDKLWKALFYCMWMSDKRPVQEELSTNLAGLVHRIP-NAESALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVVLLRDQDWEEDLVQEFVTILSTEVVSQ-LPNGLRMHLADLYLTEIHNAAGKEVTTEAFMTLLEPFFTLLSSEYDKTVFKRVRELVFDDMLAKYKFGPQSEKEKSDDEEETDDEEEEDKVFEQVDVAQVQHRIFAIASADDTAERNRAALYTLYKKF 275          
BLAST of EWM24267.1 vs. NCBI_GenBank
Match: gi|970629948|gb|KUF77047.1| (Ribosomal RNA processing protein 1 B [Phytophthora nicotianae] >gi|970640114|gb|KUF82826.1| Ribosomal RNA processing protein 1 B [Phytophthora nicotianae])

HSP 1 Score: 195.667 bits (496), Expect = 1.780e-50
Identity = 105/270 (38.89%), Postives = 156/270 (57.78%), Query Frame = 0
Query:   69 FAKRLAANEKRERDQALKRLEVWMAKHKNLSEKDFLKIWKGLFYCMWMSDRARVQQDLGGAISRLVHCFGRDSGRAHLFVGAFYRTVRREWPGLDQHRLDKFYSFMRRMLRECLRFAQQRAWSAEALVSVVFPLNAEVLQQPWPNGLRLHACDLILPELARVGGGELTTAQALEVLQPFLVAMATSADRVVAERARARVLLDLVA--------SKEAEGVEAGGKEDVDAVSCMAGVDMEAVQATVFGLASSSATRERYRAALYEAHKAF 330
            F + LA  EK+ RD+ALK+L V++ K K  +E ++ K+WK LFYCMWMSD+  VQ++L   ++ LVH    ++  A  FV +F+RT+ REW GLD  RLDKFYS +R+ +RE +   + + W  + +   V  L+ EV+ Q  PNGLR+H  DL L E+    G E+TT   + +L+PF   +++  D+ V +R R  V  D++A         KE    E    ++ +       VD+  VQ  +F +AS+  T ER RAALY  +K F
Sbjct:    8 FGQHLAHTEKKYRDRALKKLTVYLTKKKEWTELEWDKLWKALFYCMWMSDKRPVQEELSTNLAGLVHRIP-NAESALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVVLLRDQDWEEDLVQEFVTILSTEVVSQ-LPNGLRMHLADLYLTEIHNAAGKEVTTEAFMTLLEPFFTLLSSEYDKTVFKRVRELVFDDMLAKYKFGPQSEKEKSDDEEETDDEEEEDKVFEQVDVAKVQHRIFAIASADDTAERNRAALYTLYKKF 275          
BLAST of EWM24267.1 vs. NCBI_GenBank
Match: gi|568047239|gb|ETM44323.1| (hypothetical protein L914_10428 [Phytophthora parasitica])

HSP 1 Score: 194.897 bits (494), Expect = 6.732e-50
Identity = 106/274 (38.69%), Postives = 158/274 (57.66%), Query Frame = 0
Query:   69 FAKRLAANEKRERDQALKRLEVWMAKHKNLSEKDFLKIWKGLFYCMWMSDRARVQQDLGGAISRLVHCFGRDSGRAHLFVGAFYRTVRREWPGLDQHRLDKFYSFMRRMLRECLRFAQQRAWSAEALVSVVFPLNAEVLQQPWPNGLRLHACDLILPELARVGGGELTTAQALEVLQPFLVAMATSADRVVAERARARVLLDLVA--------SKEAEGVEAGGKEDVDAVSCMAGVDMEAVQATVFGLASSSATRERYRAALYEAHKAFQKLT 334
            F + LA  EK+ RD+ALK+L V++ K K  +E ++ K+WK LFYCMWMSD+  VQ++L   ++ LVH    ++  A  FV +F+RT+ REW GLD  RLDKFYS +R+ +RE +   + + W  + +   V  L+ EV+ Q  PNGLR+H  DL L E+    G E+TT   + +L+PF   +++  D+ V +R R  V  D++A         KE    E    ++ +       VD+  VQ  +F +AS+  T ER RAALY  +K F  +T
Sbjct:   64 FGQHLAHTEKKYRDRALKKLTVYLTKKKEWTELEWDKLWKALFYCMWMSDKRPVQEELSTNLAGLVHRIP-NAESALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFIRETVVLLRDQDWEEDLIQEFVTILSTEVVSQ-LPNGLRMHLADLYLTEIHNAAGKEVTTEAFMTLLEPFFTLLSSEYDKTVFKRVRELVFDDMLAKYKFGPQSEKEKSDDEEETDDEEEEDKVFEQVDVAKVQHRIFAIASADDTAERNRAALYTLYKKFFTVT 335          
BLAST of EWM24267.1 vs. NCBI_GenBank
Match: gi|570325180|gb|ETO73128.1| (hypothetical protein F444_10910 [Phytophthora parasitica P1976])

HSP 1 Score: 194.897 bits (494), Expect = 6.934e-50
Identity = 106/274 (38.69%), Postives = 158/274 (57.66%), Query Frame = 0
Query:   69 FAKRLAANEKRERDQALKRLEVWMAKHKNLSEKDFLKIWKGLFYCMWMSDRARVQQDLGGAISRLVHCFGRDSGRAHLFVGAFYRTVRREWPGLDQHRLDKFYSFMRRMLRECLRFAQQRAWSAEALVSVVFPLNAEVLQQPWPNGLRLHACDLILPELARVGGGELTTAQALEVLQPFLVAMATSADRVVAERARARVLLDLVA--------SKEAEGVEAGGKEDVDAVSCMAGVDMEAVQATVFGLASSSATRERYRAALYEAHKAFQKLT 334
            F + LA  EK+ RD+ALK+L V++ K K  +E ++ K+WK LFYCMWMSD+  VQ++L   ++ LVH    ++  A  FV +F+RT+ REW GLD  RLDKFYS +R+ +RE +   + + W  + +   V  L+ EV+ Q  PNGLR+H  DL L E+    G E+TT   + +L+PF   +++  D+ V +R R  V  D++A         KE    E    ++ +       VD+  VQ  +F +AS+  T ER RAALY  +K F  +T
Sbjct:   64 FGQHLAHTEKKYRDRALKKLTVYLTKKKEWTELEWDKLWKALFYCMWMSDKRPVQEELSTNLAGLVHRIP-NAESALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVVLLRDQDWEEDLIQEFVTILSTEVVSQ-LPNGLRMHLADLYLTEIHNAAGKEVTTEAFMTLLEPFFTLLSSEYDKTVFKRVRELVFDDMLAKYKFGPQSEKEKSDDEEETDDEEEEDKVFEQVDVAKVQHRIFAIASADDTAERNRAALYTLYKKFFTVT 335          
BLAST of EWM24267.1 vs. NCBI_GenBank
Match: gi|567958872|gb|ETK84456.1| (hypothetical protein L915_10580 [Phytophthora parasitica] >gi|567987596|gb|ETL37894.1| hypothetical protein L916_10471 [Phytophthora parasitica] >gi|570949020|gb|ETP14277.1| hypothetical protein F441_10769 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 194.126 bits (492), Expect = 1.239e-49
Identity = 105/270 (38.89%), Postives = 156/270 (57.78%), Query Frame = 0
Query:   69 FAKRLAANEKRERDQALKRLEVWMAKHKNLSEKDFLKIWKGLFYCMWMSDRARVQQDLGGAISRLVHCFGRDSGRAHLFVGAFYRTVRREWPGLDQHRLDKFYSFMRRMLRECLRFAQQRAWSAEALVSVVFPLNAEVLQQPWPNGLRLHACDLILPELARVGGGELTTAQALEVLQPFLVAMATSADRVVAERARARVLLDLVA--------SKEAEGVEAGGKEDVDAVSCMAGVDMEAVQATVFGLASSSATRERYRAALYEAHKAF 330
            F + LA  EK+ RD+ALK+L V++ K K  +E ++ K+WK LFYCMWMSD+  VQ++L   ++ LVH    ++  A  FV +F+RT+ REW GLD  RLDKFYS +R+ +RE +   + + W  + +   V  L+ EV+ Q  PNGLR+H  DL L E+    G E+TT   + +L+PF   +++  D+ V +R R  V  D++A         KE    E    ++ +       VD+  VQ  +F +AS+  T ER RAALY  +K F
Sbjct:   64 FGQHLAHTEKKYRDRALKKLTVYLTKKKEWTELEWDKLWKALFYCMWMSDKRPVQEELSTNLAGLVHRIP-NAESALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFIRETVVLLRDQDWEEDLVQEFVTILSTEVVSQ-LPNGLRMHLADLYLTEIHNAAGKEVTTEAFMTLLEPFFTLLSSEYDKTVFKRVRELVFDDMLAKYKFGPQSEKEKSDDEEETDDEEEEDKVFEQVDVAKVQHRIFAIASADDTAERNRAALYTLYKKF 331          
BLAST of EWM24267.1 vs. NCBI_GenBank
Match: gi|570982150|gb|ETP42349.1| (hypothetical protein F442_10744 [Phytophthora parasitica P10297])

HSP 1 Score: 194.126 bits (492), Expect = 1.327e-49
Identity = 103/270 (38.15%), Postives = 155/270 (57.41%), Query Frame = 0
Query:   69 FAKRLAANEKRERDQALKRLEVWMAKHKNLSEKDFLKIWKGLFYCMWMSDRARVQQDLGGAISRLVHCFGRDSGRAHLFVGAFYRTVRREWPGLDQHRLDKFYSFMRRMLRECLRFAQQRAWSAEALVSVVFPLNAEVLQQPWPNGLRLHACDLILPELARVGGGELTTAQALEVLQPFLVAMATSADRVVAERARARVLLDLVASKE--------AEGVEAGGKEDVDAVSCMAGVDMEAVQATVFGLASSSATRERYRAALYEAHKAF 330
            F + LA  EK+ RD+ALK+L V++ K K  +E ++ K+WK LFYCMWMSD+  VQ++L   ++ LVH    ++  A  FV +F+RT+ REW GLD  RLDKFYS +R+ +RE +   + + W  + +   V  L+ EV+ Q  PNGLR+H  DL L E+    G E+TT   + +L+PF   +++  D+ V +R R  V  D++A  +            E    ++ +       VD+  VQ  +F +AS+  T ER RAALY  +K F
Sbjct:   64 FGQHLAHTEKKYRDRALKKLTVYLTKKKEWTELEWDKLWKALFYCMWMSDKRPVQEELSTNLAGLVHRIP-NAESALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVVLLRDQDWEEDLVQEFVTILSTEVVSQ-LPNGLRMHLADLYLTEIHNAAGKEVTTEAFMTLLEPFFTLLSSEYDKTVFKRVRELVFDDMLAKHKFGPQSEKEKSDDEEETDDEEEEDKVFEQVDVAKVQHRIFAIASADDTAERNRAALYTLYKKF 331          
BLAST of EWM24267.1 vs. NCBI_GenBank
Match: gi|675195815|ref|XP_008906792.1| (hypothetical protein PPTG_12501 [Phytophthora parasitica INRA-310] >gi|568093189|gb|ETN07988.1| hypothetical protein PPTG_12501 [Phytophthora parasitica INRA-310])

HSP 1 Score: 194.126 bits (492), Expect = 1.367e-49
Identity = 106/274 (38.69%), Postives = 158/274 (57.66%), Query Frame = 0
Query:   69 FAKRLAANEKRERDQALKRLEVWMAKHKNLSEKDFLKIWKGLFYCMWMSDRARVQQDLGGAISRLVHCFGRDSGRAHLFVGAFYRTVRREWPGLDQHRLDKFYSFMRRMLRECLRFAQQRAWSAEALVSVVFPLNAEVLQQPWPNGLRLHACDLILPELARVGGGELTTAQALEVLQPFLVAMATSADRVVAERARARVLLDLVA--------SKEAEGVEAGGKEDVDAVSCMAGVDMEAVQATVFGLASSSATRERYRAALYEAHKAFQKLT 334
            F + LA  EK+ RD+ALK+L V++ K K  +E ++ K+WK LFYCMWMSD+  VQ++L   ++ LVH    ++  A  FV +F+RT+ REW GLD  RLDKFYS +R+ +RE +   + + W  + +   V  L+ EV+ Q  PNGLR+H  DL L E+    G E+TT   + +L+PF   +++  D+ V +R R  V  D++A         KE    E    ++ +       VD+  VQ  +F +AS+  T ER RAALY  +K F  +T
Sbjct:   64 FGQHLAHTEKKYRDRALKKLTVYLTKKKEWTELEWDKLWKALFYCMWMSDKRPVQEELSTNLAGLVHRIP-NAESALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFIRETVVLLRDQDWEEDLVQEFVTILSTEVVSQ-LPNGLRMHLADLYLTEIHNAAGKEVTTEAFMTLLEPFFTLLSSEYDKTVFKRVRELVFDDMLAKYKFGPQSEKEKSDDEEETDDEEEEDKVFEQVDVAQVQHRIFAIASADDTAERNRAALYTLYKKFFTVT 335          
BLAST of EWM24267.1 vs. NCBI_GenBank
Match: gi|566021555|gb|ETI44466.1| (hypothetical protein F443_10843 [Phytophthora parasitica P1569])

HSP 1 Score: 194.126 bits (492), Expect = 1.471e-49
Identity = 105/270 (38.89%), Postives = 156/270 (57.78%), Query Frame = 0
Query:   69 FAKRLAANEKRERDQALKRLEVWMAKHKNLSEKDFLKIWKGLFYCMWMSDRARVQQDLGGAISRLVHCFGRDSGRAHLFVGAFYRTVRREWPGLDQHRLDKFYSFMRRMLRECLRFAQQRAWSAEALVSVVFPLNAEVLQQPWPNGLRLHACDLILPELARVGGGELTTAQALEVLQPFLVAMATSADRVVAERARARVLLDLVA--------SKEAEGVEAGGKEDVDAVSCMAGVDMEAVQATVFGLASSSATRERYRAALYEAHKAF 330
            F + LA  EK+ RD+ALK+L V++ K K  +E ++ K+WK LFYCMWMSD+  VQ++L   ++ LVH    ++  A  FV +F+RT+ REW GLD  RLDKFYS +R+ +RE +   + + W  + +   V  L+ EV+ Q  PNGLR+H  DL L E+    G E+TT   + +L+PF   +++  D+ V +R R  V  D++A         KE    E    ++ +       VD+  VQ  +F +AS+  T ER RAALY  +K F
Sbjct:   64 FGQHLAHTEKKYRDRALKKLTVYLTKKKEWTELEWDKLWKALFYCMWMSDKRPVQEELSTNLAGLVHRIP-NAESALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVVLLRDQDWEEDLIQEFVTILSTEVVSQ-LPNGLRMHLADLYLTEIHNAAGKEVTTEAFMTLLEPFFTLLSSEYDKTVFKRVRELVFDDMLAKYKFGPQSEKEKSDDEEETDDEEEEDKVFEQVDVAKVQHRIFAIASADDTAERNRAALYTLYKKF 331          
BLAST of EWM24267.1 vs. NCBI_GenBank
Match: gi|568016846|gb|ETL91023.1| (hypothetical protein L917_10390 [Phytophthora parasitica])

HSP 1 Score: 193.356 bits (490), Expect = 2.278e-49
Identity = 105/270 (38.89%), Postives = 156/270 (57.78%), Query Frame = 0
Query:   69 FAKRLAANEKRERDQALKRLEVWMAKHKNLSEKDFLKIWKGLFYCMWMSDRARVQQDLGGAISRLVHCFGRDSGRAHLFVGAFYRTVRREWPGLDQHRLDKFYSFMRRMLRECLRFAQQRAWSAEALVSVVFPLNAEVLQQPWPNGLRLHACDLILPELARVGGGELTTAQALEVLQPFLVAMATSADRVVAERARARVLLDLVA--------SKEAEGVEAGGKEDVDAVSCMAGVDMEAVQATVFGLASSSATRERYRAALYEAHKAF 330
            F + LA  EK+ RD+ALK+L V++ K K  +E ++ K+WK LFYCMWMSD+  VQ++L   ++ LVH    ++  A  FV +F+RT+ REW GLD  RLDKFYS +R+ +RE +   + + W  + +   V  L+ EV+ Q  PNGLR+H  DL L E+    G E+TT   + +L+PF   +++  D+ V +R R  V  D++A         KE    E    ++ +       VD+  VQ  +F +AS+  T ER RAALY  +K F
Sbjct:   64 FGQHLAHTEKKYRDRALKKLTVYLTKKKEWTELEWDKLWKALFYCMWMSDKRPVQEELSTNLAGLVHRIP-NAESALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVVLLRDQDWEEDLVQEFVTILSTEVVSQ-LPNGLRMHLADLYLTEIHNAAGKEVTTEAFMTLLEPFFTLLSSEYDKTVFKRVRELVFDDMLAKYKFGPQSEKEKSDDEEETDDEEEEDKVFEQVDVAKVQHRIFAIASADDTAERNRAALYTLYKKF 331          
The following BLAST results are available for this feature:
BLAST of EWM24267.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105658|gb|EWM24267.1|0.000e+0100.00ribosomal rna processing protein 1 [Nannochloropsi... [more]
gi|970658344|gb|KUF96119.1|1.762e-5038.89hypothetical protein AM588_10008175 [Phytophthora ... [more]
gi|970629948|gb|KUF77047.1|1.780e-5038.89Ribosomal RNA processing protein 1 B [Phytophthora... [more]
gi|568047239|gb|ETM44323.1|6.732e-5038.69hypothetical protein L914_10428 [Phytophthora para... [more]
gi|570325180|gb|ETO73128.1|6.934e-5038.69hypothetical protein F444_10910 [Phytophthora para... [more]
gi|567958872|gb|ETK84456.1|1.239e-4938.89hypothetical protein L915_10580 [Phytophthora para... [more]
gi|570982150|gb|ETP42349.1|1.327e-4938.15hypothetical protein F442_10744 [Phytophthora para... [more]
gi|675195815|ref|XP_008906792.1|1.367e-4938.69hypothetical protein PPTG_12501 [Phytophthora para... [more]
gi|566021555|gb|ETI44466.1|1.471e-4938.89hypothetical protein F443_10843 [Phytophthora para... [more]
gi|568016846|gb|ETL91023.1|2.278e-4938.89hypothetical protein L917_10390 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6451rna6451Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications