EWM24285.1, cds6433 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM24285.1 vs. NCBI_GenBank
Match: gi|585105676|gb|EWM24285.1| (hypothetical protein Naga_100020g29 [Nannochloropsis gaditana]) HSP 1 Score: 819.305 bits (2115), Expect = 0.000e+0 Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 0
Query: 1 MQDDLESKTAATQREFRDQHMQLSQRLSVAIQRLALYEVKSGERYDLLKNTLLELALKLVRKKVVAGLGPDPSIPDLLTQLDVQRTESTDQLLRLEQDIEGLSGSYEQLHGSVQALVTRSNHWAALDVRLQEYHESLVKHCRHIFARSSLSSYGPDQVLQLQGRGLLLKKETVDLIASHSYRIAKTIALKADYDIIRHNVESKDTLTDNQCDAKILQSRETYLMRFLGGVKRAVEVGLDGEGRASGITEIITQFHSKLEQAIRLALSKFSRIHTGRSLFGKISLEAEAACLACNRQFPEEPGQGDRRASFRKSVTGSNSINAISGSNGISQRGSIYRQNRNSFKTFSSSKEASFLENAIKEQRGRRSDARENVVSTARASTPANRQGRRATSYSLGTATIIS 402
MQDDLESKTAATQREFRDQHMQLSQRLSVAIQRLALYEVKSGERYDLLKNTLLELALKLVRKKVVAGLGPDPSIPDLLTQLDVQRTESTDQLLRLEQDIEGLSGSYEQLHGSVQALVTRSNHWAALDVRLQEYHESLVKHCRHIFARSSLSSYGPDQVLQLQGRGLLLKKETVDLIASHSYRIAKTIALKADYDIIRHNVESKDTLTDNQCDAKILQSRETYLMRFLGGVKRAVEVGLDGEGRASGITEIITQFHSKLEQAIRLALSKFSRIHTGRSLFGKISLEAEAACLACNRQFPEEPGQGDRRASFRKSVTGSNSINAISGSNGISQRGSIYRQNRNSFKTFSSSKEASFLENAIKEQRGRRSDARENVVSTARASTPANRQGRRATSYSLGTATIIS
Sbjct: 1 MQDDLESKTAATQREFRDQHMQLSQRLSVAIQRLALYEVKSGERYDLLKNTLLELALKLVRKKVVAGLGPDPSIPDLLTQLDVQRTESTDQLLRLEQDIEGLSGSYEQLHGSVQALVTRSNHWAALDVRLQEYHESLVKHCRHIFARSSLSSYGPDQVLQLQGRGLLLKKETVDLIASHSYRIAKTIALKADYDIIRHNVESKDTLTDNQCDAKILQSRETYLMRFLGGVKRAVEVGLDGEGRASGITEIITQFHSKLEQAIRLALSKFSRIHTGRSLFGKISLEAEAACLACNRQFPEEPGQGDRRASFRKSVTGSNSINAISGSNGISQRGSIYRQNRNSFKTFSSSKEASFLENAIKEQRGRRSDARENVVSTARASTPANRQGRRATSYSLGTATIIS 402
BLAST of EWM24285.1 vs. NCBI_GenBank
Match: gi|298713764|emb|CBJ33731.1| (myosin-like antigen [Ectocarpus siliculosus]) HSP 1 Score: 87.0409 bits (214), Expect = 7.046e-15 Identity = 61/235 (25.96%), Postives = 117/235 (49.79%), Query Frame = 0
Query: 77 LLTQLDVQRTESTDQLLRLEQDIEGLSGSYEQLHGSVQALVTRSNHWAALDVRLQEYHESLVKHCRHIFARSSLS---SYGPDQVLQLQGRGLLLKKETVDLIASHSYRIAKTIALKADYDIIRHNVESKDTLTDNQCDAKILQSRETYLMRFLGGVKRAVEVGLDGEGRASGITEIITQFHSKLEQAIRLALSKFSRIHTGRSLFGKISLEAEAACLACNRQFPEEPGQGDRRA 308
L+ +D + E+ D++ LE+ + + +L S+ AL T+ W L+V+ + + + L H + ++ + S GP ++K +++ S +AK +A +ADY++ R V K+ D+ D K+ + R ++ +F+ V + R + E+ F +KLE +++LA+SK+ I G ++ GK+ L +C+AC+R F + PG GD R+
Sbjct: 136 LVKDIDHFKAENGDRMTSLERSNVSVVTTMRRLQRSLDALATKEGRWDRLEVQTKRHVQVLGGHLADLEGAATCAEPFSLGP-----------AMQKH----VSAVSQMVAKIVATRADYEVTRQAVNRKNPGEDSDWDRKVEELRIRFMNKFVSDVVQVASKLRPLPDRP--VEEVRETFATKLELSMKLAISKYKPIQAGATILGKVHL--LPSCMACDRPFIDNPGPGDPRS 351
BLAST of EWM24285.1 vs. NCBI_GenBank
Match: gi|299472188|emb|CBN79691.1| (hypothetical protein Esi_0368_0016 [Ectocarpus siliculosus]) HSP 1 Score: 73.9442 bits (180), Expect = 1.686e-10 Identity = 64/222 (28.83%), Postives = 104/222 (46.85%), Query Frame = 0
Query: 73 SIPDLLTQLDVQRTESTDQLLRLEQDIEGLSGSYEQLHGSVQALVTRSNHWAALDVRLQEYHESLVKHCRHIFARSSLSSYGPDQVLQLQGRGLLLKKETVDLIASHSYRIAKTIALKADYDIIRHNVESKDTL--TDNQCDAKILQSRETYLMRFLGGVKRA-------VEVGLDGEGRASGITEIITQFHSKLEQAIRLALSKFSRIHTGRSLFGKISLE 285
S+ L T L Q ++ + L++ G+ ++ V AL T+ W A+DV+L + ++ + C + D + + R + L KE +A R+AK +A+KADY++IR + DT T D ++ R+T + RFL + A V +GE EI +F KL A+++ALSK+S G +LFGKI L+
Sbjct: 662 SLAHLGTALRRQGEDAAQMVSTLQRSSVGIVTVLRKMEAGVHALSTKDLFWKAVDVKLAAHQRAVGEVCLDV----------EDATVSRRSR-ITLSKEAQACLAGDMQRVAKLMAVKADYEVIR-ELAKLDTPEQTGQDWDERVEFLRQTQMRRFLKDCRDALDKTAPEVRTNFNGE-------EIRGKFMGKLSDALKVALSKYSPTTPGATLFGKIKLK 864 The following BLAST results are available for this feature:
BLAST of EWM24285.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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