EWM24274.1, cds6426 (CDS) Nannochloropsis gaditana

Overview
NameEWM24274.1
Unique Namecds6426
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:519393..519418 +
Alignment locationCM002468.1:519647..520010 +

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Properties
Property NameValue
Protein idEWM24274.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100020g37.5407.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:519393..519418 +
CM002468.1supercontigCM002468.1:519647..520010 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM24274.1 vs. NCBI_GenBank
Match: gi|585105665|gb|EWM24274.1| (hypothetical protein Naga_100020g37 [Nannochloropsis gaditana])

HSP 1 Score: 264.233 bits (674), Expect = 2.062e-89
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0 
Query:    1 MVSYNRHHRGPEESCIMCLHVWVSLAIHVPSSPSGYKVVPNLRRGTYWPHMGLSFHSHSSHSSAMPPSVIANCASASGIDGESTTLATRQFSRPFLRWMRVHEACANTLPPTGLTTGAKRLIAPGSAVH 129
            MVSYNRHHRGPEESCIMCLHVWVSLAIHVPSSPSGYKVVPNLRRGTYWPHMGLSFHSHSSHSSAMPPSVIANCASASGIDGESTTLATRQFSRPFLRWMRVHEACANTLPPTGLTTGAKRLIAPGSAVH
Sbjct:    1 MVSYNRHHRGPEESCIMCLHVWVSLAIHVPSSPSGYKVVPNLRRGTYWPHMGLSFHSHSSHSSAMPPSVIANCASASGIDGESTTLATRQFSRPFLRWMRVHEACANTLPPTGLTTGAKRLIAPGSAVH 129
The following BLAST results are available for this feature:
BLAST of EWM24274.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105665|gb|EWM24274.1|2.062e-89100.00hypothetical protein Naga_100020g37 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6442rna6442Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications