EWM24276.1, cds6422 (CDS) Nannochloropsis gaditana

BLAST of EWM24276.1 vs. NCBI_GenBank
Match: gi|585105666|gb|EWM24275.1| (dna-directed rna polymerase ii 19 kda polypeptide [Nannochloropsis gaditana])

HSP 1 Score: 298.516 bits (763), Expect = 5.192e-102
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0

Query:    1 MMEGTLEPDLGFVIALVALDDQHIRPGKIEYETGEVEVWVKFTVMLFRPFRNEILDAQVTTVTDMGFFADAGPVQGIYVNKHQMPQDYGFDAQDNVWRTSDMEVEIRPGCGVRMRVVGVDITPGRMNVVGSIMDDYTGLISGETD 145
            MMEGTLEPDLGFVIALVALDDQHIRPGKIEYETGEVEVWVKFTVMLFRPFRNEILDAQVTTVTDMGFFADAGPVQGIYVNKHQMPQDYGFDAQDNVWRTSDMEVEIRPGCGVRMRVVGVDITPGRMNVVGSIMDDYTGLISGETD
Sbjct:   33 MMEGTLEPDLGFVIALVALDDQHIRPGKIEYETGEVEVWVKFTVMLFRPFRNEILDAQVTTVTDMGFFADAGPVQGIYVNKHQMPQDYGFDAQDNVWRTSDMEVEIRPGCGVRMRVVGVDITPGRMNVVGSIMDDYTGLISGETD 177          

BLAST of EWM24276.1 vs. NCBI_GenBank
Match: gi|585105667|gb|EWM24276.1| (dna-directed rna polymerase ii 19 kda polypeptide [Nannochloropsis gaditana])

HSP 1 Score: 296.975 bits (759), Expect = 5.889e-102
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0

Query:    1 MMEGTLEPDLGFVIALVALDDQHIRPGKIEYETGEVEVWVKFTVMLFRPFRNEILDAQVTTVTDMGFFADAGPVQGIYVNKHQMPQDYGFDAQDNVWRTSDMEVEIRPGCGVRMRVVGVDITPGRMNVVGSIMDDYTGLISGETD 145
            MMEGTLEPDLGFVIALVALDDQHIRPGKIEYETGEVEVWVKFTVMLFRPFRNEILDAQVTTVTDMGFFADAGPVQGIYVNKHQMPQDYGFDAQDNVWRTSDMEVEIRPGCGVRMRVVGVDITPGRMNVVGSIMDDYTGLISGETD
Sbjct:    1 MMEGTLEPDLGFVIALVALDDQHIRPGKIEYETGEVEVWVKFTVMLFRPFRNEILDAQVTTVTDMGFFADAGPVQGIYVNKHQMPQDYGFDAQDNVWRTSDMEVEIRPGCGVRMRVVGVDITPGRMNVVGSIMDDYTGLISGETD 145          

BLAST of EWM24276.1 vs. NCBI_GenBank
Match: gi|325185644|emb|CCA20126.1| (DNAdirected RNA polymerase II 19 kDa polypeptide pu [Albugo laibachii Nc14])

HSP 1 Score: 138.272 bits (347), Expect = 9.286e-39
Identity = 67/146 (45.89%), Postives = 98/146 (67.12%), Query Frame = 0

Query:    2 MEGTLEPDLGFVIALVALDDQHIRPGKIEYETGEVEVWVKFTVMLFRPFRNEILDAQVTTVTDMGFFADAGPVQGIYVNKHQMPQDY--GFDAQDNVWRTSDMEVEIRPGCGVRMRVVGVDITPGRMNVVGSIMDDYTGLISGETD 145
            +EGT     G+VI +  + D+ I  G I+  +G V   +++  +LFRPF+NE+LDA V+ V  +GFFAD GP+Q ++V++H MP D   G+D ++N W + D EVEIR GCGVR+R++GV I    +N +G+I DDY GLIS E +
Sbjct:   34 VEGTSMGKYGYVITVTEVRDEDIGKGVIQDNSGYVCFNIRYRAILFRPFKNEVLDAVVSVVNQLGFFADVGPLQ-VFVSRHAMPTDLNNGYDHENNAWISDDREVEIRKGCGVRLRIMGVSIDVTEINAIGTIKDDYLGLISSENN 178          

BLAST of EWM24276.1 vs. NCBI_GenBank
Match: gi|301099953|ref|XP_002899067.1| (DNA-directed RNA polymerase II 19 kDa polypeptide [Phytophthora infestans T30-4] >gi|675169637|ref|XP_008893703.1| hypothetical protein PPTG_02059 [Phytophthora parasitica INRA-310] >gi|262104379|gb|EEY62431.1| DNA-directed RNA polymerase II 19 kDa polypeptide [Phytophthora infestans T30-4] >gi|566021744|gb|ETI44655.1| hypothetical protein F443_10664 [Phytophthora parasitica P1569] >gi|567959058|gb|ETK84638.1| hypothetical protein L915_10426 [Phytophthora parasitica] >gi|567987780|gb|ETL38075.1| hypothetical protein L916_10318 [Phytophthora parasitica] >gi|568016998|gb|ETL91175.1| hypothetical protein L917_10259 [Phytophthora parasitica] >gi|568047413|gb|ETM44494.1| hypothetical protein L914_10286 [Phytophthora parasitica] >gi|568107369|gb|ETN21999.1| hypothetical protein PPTG_02059 [Phytophthora parasitica INRA-310] >gi|570325330|gb|ETO73278.1| hypothetical protein F444_10770 [Phytophthora parasitica P1976] >gi|570949236|gb|ETP14493.1| hypothetical protein F441_10611 [Phytophthora parasitica CJ01A1] >gi|570982404|gb|ETP42537.1| hypothetical protein F442_10571 [Phytophthora parasitica P10297] >gi|953498352|emb|CEG39990.1| rna polymerase ii subunit [Plasmopara halstedii] >gi|970655944|gb|KUF94025.1| Glycoside-Pentoside-Hexuronide (GPH):Cation Symporter Family [Phytophthora nicotianae] >gi|970665100|gb|KUG01842.1| DNA-directed RNA polymerase II 19 kDa polypeptide [Phytophthora nicotianae])

HSP 1 Score: 132.88 bits (333), Expect = 1.137e-36
Identity = 64/145 (44.14%), Postives = 96/145 (66.21%), Query Frame = 0

Query:    2 MEGTLEPDLGFVIALVALDDQHIRPGKIEYETGEVEVWVKFTVMLFRPFRNEILDAQVTTVTDMGFFADAGPVQGIYVNKHQMPQDY--GFDAQDNVWRTSDMEVEIRPGCGVRMRVVGVDITPGRMNVVGSIMDDYTGLISGET 144
            +EGT     G+VI +  + D+ I  G I+  +G V   +++  +LFRPF+N++LDA VT V  +GFFAD GP+Q ++V++H MP D   G+D + N W + D EVEIR GCGVR++++GV +    +N +G+I DDY GLIS + 
Sbjct:   34 VEGTSMGKYGYVITVTEVRDEDIGKGVIQDNSGFVCFNIRYRAILFRPFKNQVLDAVVTVVNQLGFFADVGPLQ-VFVSRHAMPTDLNNGYDHESNAWISDDREVEIRKGCGVRLKIMGVSVDVTEINAIGTIKDDYLGLISSDN 177          

BLAST of EWM24276.1 vs. NCBI_GenBank
Match: gi|224002987|ref|XP_002291165.1| (19kDa subunit of RNA polymerase [Thalassiosira pseudonana CCMP1335] >gi|220972941|gb|EED91272.1| 19kDa subunit of RNA polymerase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 130.183 bits (326), Expect = 1.702e-35
Identity = 64/149 (42.95%), Postives = 97/149 (65.10%), Query Frame = 0

Query:    2 MEGTLEPDLGFVIALVALDDQHIRPGKIEYETGEVEVWVKFTVMLFRPFRNEILDAQVTTVTDMGFFADAGPVQGIYVNKHQMPQDY--GFDAQDNVWRTSDMEVEIRPGCGVRMRVVGVDITPGRMNVVGSIMDDYTGLI---SGETD 145
            +EG    + GFV+ ++ + ++ IR G IEY+TG V  +VK+T +L RPF NE++DA V    ++GFFA  GP++ I+V+KH MP+D   GFD + + W + D EV I  GCGVR+++ G  +  G +  +G+I D+Y GLI   SGE +
Sbjct:   34 VEGLALANYGFVVNVIEVPEEQIRSGIIEYDTGNVVFYVKYTALLLRPFINEVVDATVAQCNELGFFAYVGPLR-IFVSKHSMPEDMFNGFDGERDSWVSDDKEVVIASGCGVRLKIKGRTVEQGNITAIGTIKDNYLGLIDDGSGEAE 181          

BLAST of EWM24276.1 vs. NCBI_GenBank
Match: gi|635360330|emb|CCI50307.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 134.806 bits (338), Expect = 7.526e-35
Identity = 64/146 (43.84%), Postives = 97/146 (66.44%), Query Frame = 0

Query:    2 MEGTLEPDLGFVIALVALDDQHIRPGKIEYETGEVEVWVKFTVMLFRPFRNEILDAQVTTVTDMGFFADAGPVQGIYVNKHQMPQDY--GFDAQDNVWRTSDMEVEIRPGCGVRMRVVGVDITPGRMNVVGSIMDDYTGLISGETD 145
            +EGT     G+VI +  + D+ I  G I+  +G V   +++  +LFRPF+N++LDA V+ V  +GFFAD GP+Q ++V++H MP D   G+D ++N W + D EVEIR  CG+R+R++GV I    +N +G+I DDY GLIS E +
Sbjct:  298 VEGTSMGKYGYVITVTEVRDEDIGKGVIQDSSGYVCFNIRYRAILFRPFKNQVLDAVVSVVNQLGFFADVGPLQ-VFVSRHAMPTDLNNGYDHENNAWISDDREVEIRKSCGIRLRIMGVSIDVTEINAIGTIKDDYLGLISTENN 442          

BLAST of EWM24276.1 vs. NCBI_GenBank
Match: gi|397575684|gb|EJK49830.1| (hypothetical protein THAOC_31253 [Thalassiosira oceanica])

HSP 1 Score: 126.331 bits (316), Expect = 5.108e-34
Identity = 59/141 (41.84%), Postives = 92/141 (65.25%), Query Frame = 0

Query:    2 MEGTLEPDLGFVIALVALDDQHIRPGKIEYETGEVEVWVKFTVMLFRPFRNEILDAQVTTVTDMGFFADAGPVQGIYVNKHQMPQDY--GFDAQDNVWRTSDMEVEIRPGCGVRMRVVGVDITPGRMNVVGSIMDDYTGLI 140
            +EG    + GFV+ ++ + ++ IR G IEY+TG V  +VK+T ++ RPF NE++DA V    ++GFFA  GP++ I+V+KH MP+D   GFD + + W + D EV I  GCGVR+++ G  +    +  +G+I D+Y GLI
Sbjct:   34 VEGLALANYGFVVNVIEVPEEQIRSGVIEYDTGNVVFYVKYTALMLRPFVNEVIDATVAQCNELGFFAYVGPLR-IFVSKHSMPEDMFNGFDGERDSWVSDDKEVVISSGCGVRLKIKGRTVEQNNITAIGTIKDNYLGLI 173          

BLAST of EWM24276.1 vs. NCBI_GenBank
Match: gi|1173945204|gb|OQR93862.1| (DNA-directed RNA polymerase II [Thraustotheca clavata])

HSP 1 Score: 125.176 bits (313), Expect = 1.359e-33
Identity = 64/144 (44.44%), Postives = 96/144 (66.67%), Query Frame = 0

Query:    2 MEGTLEPDLGFVIALVALDDQHIRPGKIEYETGEVEVWVKFTVMLFRPFRNEILDAQVTTVTDMGFFADAGPVQGIYVNKHQMPQDY--GFDAQDNVWRTSDMEVEIRPGCGVRMRVVGVDITPGRMNVVGSIMDDYTGLISGE 143
            +EGT     GFVIA+  + D+ I  G I+  +G V   + +  +LFRPF+NE+LDA V+ VT +GFFA+ GP+Q ++V++H M  D   GFD +++ W + D EVEIR G GVR++++GV I    +N VG+I D+Y G+IS +
Sbjct:   34 VEGTSLGKYGFVIAVTEVLDEDIGQGVIQDNSGFVCFNIAYRAILFRPFKNEVLDAVVSMVTHLGFFAEVGPLQ-VFVSRHAMSTDLVDGFDHENSAWISQDREVEIRKGVGVRLKIMGVSIDVTEINAVGTIKDNYLGVISAD 176          

BLAST of EWM24276.1 vs. NCBI_GenBank
Match: gi|1072235217|gb|OEU19946.1| (hypothetical protein FRACYDRAFT_181715 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 124.405 bits (311), Expect = 2.820e-33
Identity = 61/146 (41.78%), Postives = 93/146 (63.70%), Query Frame = 0

Query:    2 MEGTLEPDLGFVIALVALDDQHIRPGKIEYETGEVEVWVKFTVMLFRPFRNEILDAQVTTVTDMGFFADAGPVQGIYVNKHQMPQDY--GFDAQDNVWRTSDMEVEIRPGCGVRMRVVGVDITPGRMNVVGSIMDDYTGLISGETD 145
            +EG    + GFV+ ++ + +  I+ G IEY+TG+V   VK+T +L RPF NE+LDA V+    +GFFA  GP++ ++V+KH MP+D   G++   + W + D EV I  GCGVR+R+ G  +  G +  +G+I D Y GL+S E D
Sbjct:   34 VEGLALAEYGFVVNVIEVPEDQIKSGIIEYDTGDVVFSVKYTALLLRPFVNEVLDAVVSQCNTLGFFAYVGPLR-VFVSKHSMPEDMLNGWNTDKDSWVSDDKEVIISSGCGVRLRIKGRTVEQGNITAIGTIKDSYLGLVSEEDD 178          

BLAST of EWM24276.1 vs. NCBI_GenBank
Match: gi|219118585|ref|XP_002180062.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408319|gb|EEC48253.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 122.094 bits (305), Expect = 2.026e-32
Identity = 59/141 (41.84%), Postives = 91/141 (64.54%), Query Frame = 0

Query:    2 MEGTLEPDLGFVIALVALDDQHIRPGKIEYETGEVEVWVKFTVMLFRPFRNEILDAQVTTVTDMGFFADAGPVQGIYVNKHQMPQD--YGFDAQDNVWRTSDMEVEIRPGCGVRMRVVGVDITPGRMNVVGSIMDDYTGLI 140
            +EG    + G+V+ ++ + +  IR G IEY+TG V   VK+T +L RPF NE+LDA VT    +GFFA  GP++ I+V+KH MP+D  +GF+ + + W + D EV I  G GVR+++ G  +  G +  +G+I D+Y GL+
Sbjct:   34 VEGLALANYGYVVNVIEVPEDQIRSGIIEYDTGNVVFTVKYTALLLRPFLNEVLDAVVTQCNALGFFAFCGPLR-IFVSKHSMPEDMFHGFNHEQDAWVSDDKEVVIAAGSGVRLKIKGRTVEQGNITAIGTIKDNYLGLV 173