EWM24273.1, cds6417 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24273.1 vs. NCBI_GenBank
Match: gi|585105664|gb|EWM24273.1| (protein of unknown function DUF1214 [Nannochloropsis gaditana]) HSP 1 Score: 1091.26 bits (2821), Expect = 0.000e+0 Identity = 524/524 (100.00%), Postives = 524/524 (100.00%), Query Frame = 0 Query: 1 MSGSSPSSSEGFRWCEVRCNKWQRAGAERTRGWLTFSMHVLVFILMSFIFLKYTGLVLRNPAPLCSWRLSQSLNVAWTDTQASHHSMVMFLNEGEEYTVESESLPYSRFFSFQTYSLDGKTSYGILRDAEIVSQNGPNLYANMSAAAGGEKQGGYTLYLTPDGSKGYPNELQTLKYGQKSGFFVLIFRIYDVGDFPHPMAPWAHLSRGDARQPQRWGWTPPPRVSVRRTMRQGSWREIPSCVTRQGPGGKLWSKTYILGLTNRLEDIFPPSHSYTGFIKPLRQNNFHLPHDHLFSSVDTRTLVSAAAIPAVDVGDVWARVEAKLPRTPSSLYSPPFIANQSDYDVRYISFTSASRAFPLWTFETLTDKSIRQHYESRLRGPHEQWDGRFSLWIGPVNAPPPEQARLENALIMRWGEVARPALLYNQLLSSSRAASGAAPPTLANVVVNECPRAAEHDNHDEEDEDGSFINEGNVCCLSEPRGMPTFCRMPEFLHLNLREYFPAVTFFSYETQDEHGPTLRKISM 524 MSGSSPSSSEGFRWCEVRCNKWQRAGAERTRGWLTFSMHVLVFILMSFIFLKYTGLVLRNPAPLCSWRLSQSLNVAWTDTQASHHSMVMFLNEGEEYTVESESLPYSRFFSFQTYSLDGKTSYGILRDAEIVSQNGPNLYANMSAAAGGEKQGGYTLYLTPDGSKGYPNELQTLKYGQKSGFFVLIFRIYDVGDFPHPMAPWAHLSRGDARQPQRWGWTPPPRVSVRRTMRQGSWREIPSCVTRQGPGGKLWSKTYILGLTNRLEDIFPPSHSYTGFIKPLRQNNFHLPHDHLFSSVDTRTLVSAAAIPAVDVGDVWARVEAKLPRTPSSLYSPPFIANQSDYDVRYISFTSASRAFPLWTFETLTDKSIRQHYESRLRGPHEQWDGRFSLWIGPVNAPPPEQARLENALIMRWGEVARPALLYNQLLSSSRAASGAAPPTLANVVVNECPRAAEHDNHDEEDEDGSFINEGNVCCLSEPRGMPTFCRMPEFLHLNLREYFPAVTFFSYETQDEHGPTLRKISM Sbjct: 1 MSGSSPSSSEGFRWCEVRCNKWQRAGAERTRGWLTFSMHVLVFILMSFIFLKYTGLVLRNPAPLCSWRLSQSLNVAWTDTQASHHSMVMFLNEGEEYTVESESLPYSRFFSFQTYSLDGKTSYGILRDAEIVSQNGPNLYANMSAAAGGEKQGGYTLYLTPDGSKGYPNELQTLKYGQKSGFFVLIFRIYDVGDFPHPMAPWAHLSRGDARQPQRWGWTPPPRVSVRRTMRQGSWREIPSCVTRQGPGGKLWSKTYILGLTNRLEDIFPPSHSYTGFIKPLRQNNFHLPHDHLFSSVDTRTLVSAAAIPAVDVGDVWARVEAKLPRTPSSLYSPPFIANQSDYDVRYISFTSASRAFPLWTFETLTDKSIRQHYESRLRGPHEQWDGRFSLWIGPVNAPPPEQARLENALIMRWGEVARPALLYNQLLSSSRAASGAAPPTLANVVVNECPRAAEHDNHDEEDEDGSFINEGNVCCLSEPRGMPTFCRMPEFLHLNLREYFPAVTFFSYETQDEHGPTLRKISM 524
BLAST of EWM24273.1 vs. NCBI_GenBank
Match: gi|585109295|gb|EWM27118.1| (hypothetical protein Naga_100046g25 [Nannochloropsis gaditana]) HSP 1 Score: 285.034 bits (728), Expect = 2.479e-85 Identity = 186/536 (34.70%), Postives = 275/536 (51.31%), Query Frame = 0 Query: 15 CEVRCNKWQRAGAERTRGWLTFSMHVLVFILMSFIFLKYTGLVLRNPA----PLCSWRL---SQSLNVAWTDTQASHHSMVMFLNEGEEYTVESESLPYSRFFSFQTYSLDGKTSYGILRDAEIV-SQNGPNLYANMSAAAGGEKQGGYTLYLTPDGSKGYPNELQTLKYGQKSGFFVLIFRIY--DVGDFPHPMAPWAHLSRGDARQPQRWGWTPPPRVSVRRT-MRQGSWREIPSCVTRQGPGGKLWSKTYILGLTNRLEDIFP-PSHSYTGF--IKPLRQNNFHLP----HDHLFSSVDTRTLVSAAAIPAVDVGD---VWARVEAKLPRTPSSLYSPPFIANQSDYDVRYISFTSASRAFPLWTFETLTDKSIRQHYESRLRGPHEQWDGRFSLWIGP--VNAPPPEQARLENALIMRWGE-------VARPALLYNQLLSSSRAASGAAPPTLANVVVNECPRAAEH-------DNHDEEDEDGSFINEGNVCCLSEPRGMPTFCRMPEFLHLNLREYFPAVTFFSYETQD 513 C+ +C+ G+ R+ +L VL ++ + + L L +PA P C+WR + NVA+ D ++ +H M + +++G+E+ + +ES PY+R+ S+QTY L S+ LRD +IV NGPN YAN++AA G +QGGYTLY+T G + Y NEL+ L +SG F L FRIY + P P APW HL WGW PPPR+ +R ++ G WRE+P C R+ G KL + L +I+P PS + G + P + NN LP F+S D + S A V G +WARV LPR P SLY+PP++AN +DYDVRY+S ++ R P T+ D I +HY+ RL P +WD +F++W+ P V + P Q EN +IM+WG V LLY Q+++ S+ A+ VVN P A + + D + G + CC +E P C +PE++ + Y+P V +F+ +D Sbjct: 85 CQSKCSN-GTTGSPRSSQYLARRSQVLWTVVFASVALFIKRLQQDSPALINPPYCAWRFVGNHDAWNVAFPDMRSLYHVMQIQMSKGDEFKLVAESFPYARYCSYQTYDLRTLMSHQSLRDVDIVPDANGPNCYANLTAAQEGLRQGGYTLYMTARGDQNYTNELRALPDSIESGQFDLFFRIYVEEALQGP-PQAPWGHLPPYGKDLAFEWGWAPPPRLYAKRAHLKDGEWREVPFCQYRRRKGFKLLAY---------LSEIWPAPSPPFAGHPAVAPNKANNVFLPKYTDRQGKFASKDANYVASVAEPRHVRNGSEAMLWARVTGTLPRVPGSLYTPPYVANATDYDVRYVSLSAVHRTIPFRNHATVADTQITEHYQKRL-PPGVEWDRKFTIWVVPPQVESAYPRQVMDENPVIMKWGASLFGGGIVEYTGLLYRQVMARSQVVGLEQGALSASGVVNIVPEACQSGQVGPHGEGADAAMKAGDPLEMEQFCCSTE---APMECFLPEYVRYRMGPYYPQVEYFTGGPED 605
BLAST of EWM24273.1 vs. NCBI_GenBank
Match: gi|585107756|gb|EWM25888.1| (hypothetical protein Naga_100054g2 [Nannochloropsis gaditana]) HSP 1 Score: 157.147 bits (396), Expect = 2.072e-37 Identity = 108/304 (35.53%), Postives = 155/304 (50.99%), Query Frame = 0 Query: 29 RTRGWLTFSMHVLVFILMSFIFLKYTGLVLRNPAPLCSWRLSQ---SLNVAWTDTQASHHSMVMFLNEGEEYTVESESLPYSRFFSFQTYSLDGKTSYGILRDAEIV-SQNGPNLYANMSAAAGGEKQGGYTLYLTPDGSKGYPNELQTLKYGQKSGFFVLIFRIYD--VGDFPHPMAPWAH--------LSRGDARQPQRWGWTPPPRVSVRRTMRQ---GSWREIPSCVTRQGPGGKLWSKTYILGLTNRLEDIFPPSHSYTGFIKPLRQNNFHLPH-DHL---FSSVDTRTLVSAAAIPAV 311 R G + F+M +L + + + + + NP P C+WR S NVA+ D+ + +H +M++ GEE + S SLPY+R+FSFQ+YS+ S LRD +I+ S NGPN Y N++AA G KQGGY + +T G G+ NEL+ L + SG+F+L FRIY VG P PM+ A R PQ WGW PP V+V+R R+ G + +P C R+ K I+ D+ PP + P NF LP D++ F++ D + L S A P V Sbjct: 13 RQWGSMEFTMVILAGLGATIFWGHWQKGAILNP-PYCAWRFVSNFASWNVAFPDSTSIYHVSLMYIRRGEEIKISSSSLPYARYFSFQSYSIPDFVSSASLRDVDIIPSGNGPNCYTNLTAAMAGAKQGGYEVVVTSHGDHGHANELRALADDRASGYFILFFRIYQDRVGSLP-PMSELADDMGECFGPRGRYPTETPQEWGWACPPSVAVKRLSRRVGGGKFETLPLCGYRR--------KHGIV-----YNDVTPPVIACPSVRAPNLPFNFFLPSPDYIKQKFANKDAKYLFSCAEAPWV 301 HSP 2 Score: 100.138 bits (248), Expect = 1.538e-18 Identity = 73/250 (29.20%), Postives = 104/250 (41.60%), Query Frame = 0 Query: 315 DVWARVEAKLPRTPSSLYSPPFIANQSDYDVRYISFTSASRAFPLWTFETLTDKSIRQHYESRLRGPHEQWDGRFSLWIGP------VNAPPPEQARLENALIMRWGEVAR------PALLYNQLLS---------------------------------------------SSRAASGAAPPTLANVVVNECPRAAEHDNHDEEDEDGSFINEGNVCCLSEPRGMPTFCRMPEFLHLNLREYFPAVTFF 507 ++WARV +LPRT +SLY PPFIAN SDYDVRY+S +S R+ P ++TL D I +HY R GP D F LW+GP + P R E L + WG R P +LY Q+LS +S SGA LA ++ C + + E + + +CC P +C P F+ +R+++P V ++ Sbjct: 375 ELWARVTGRLPRTANSLYEPPFIANFSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHY-LREFGPAWLEDRSFKLWLGPPQYSLAARSHLPGIVREEKGLFLPWGRDFRGEHIPFPGILYRQILSQGQVVGPSTAAGNAGPGNGSGCAWTGERKEGHRGPPAKSLTGVGAASATGSGAPIAGLAEIIPPTC------EKQEGEGTEPLHVLSNYLCCGP---AAPEWCHDPRFVASKMRDFYPLVEYY 614
BLAST of EWM24273.1 vs. NCBI_GenBank
Match: gi|585107757|gb|EWM25889.1| (hypothetical protein Naga_100054g2 [Nannochloropsis gaditana]) HSP 1 Score: 132.88 bits (333), Expect = 2.496e-29 Identity = 91/241 (37.76%), Postives = 124/241 (51.45%), Query Frame = 0 Query: 89 MFLNEGEEYTVESESLPYSRFFSFQTYSLDGKTSYGILRDAEIV-SQNGPNLYANMSAAAGGEKQGGYTLYLTPDGSKGYPNELQTLKYGQKSGFFVLIFRIYD--VGDFPHPMAPWAH--------LSRGDARQPQRWGWTPPPRVSVRRTMRQ---GSWREIPSCVTRQGPGGKLWSKTYILGLTNRLEDIFPPSHSYTGFIKPLRQNNFHLPH-DHL---FSSVDTRTLVSAAAIPAV 311 M++ GEE + S SLPY+R+FSFQ+YS+ S LRD +I+ S NGPN Y N++AA G KQGGY + +T G G+ NEL+ L + SG+F+L FRIY VG P PM+ A R PQ WGW PP V+V+R R+ G + +P C R+ K I+ D+ PP + P NF LP D++ F++ D + L S A P V Sbjct: 1 MYIRRGEEIKISSSSLPYARYFSFQSYSIPDFVSSASLRDVDIIPSGNGPNCYTNLTAAMAGAKQGGYEVVVTSHGDHGHANELRALADDRASGYFILFFRIYQDRVGSLP-PMSELADDMGECFGPRGRYPTETPQEWGWACPPSVAVKRLSRRVGGGKFETLPLCGYRR--------KHGIV-----YNDVTPPVIACPSVRAPNLPFNFFLPSPDYIKQKFANKDAKYLFSCAEAPWV 227 HSP 2 Score: 99.7525 bits (247), Expect = 1.636e-18 Identity = 73/250 (29.20%), Postives = 104/250 (41.60%), Query Frame = 0 Query: 315 DVWARVEAKLPRTPSSLYSPPFIANQSDYDVRYISFTSASRAFPLWTFETLTDKSIRQHYESRLRGPHEQWDGRFSLWIGP------VNAPPPEQARLENALIMRWGEVAR------PALLYNQLLS---------------------------------------------SSRAASGAAPPTLANVVVNECPRAAEHDNHDEEDEDGSFINEGNVCCLSEPRGMPTFCRMPEFLHLNLREYFPAVTFF 507 ++WARV +LPRT +SLY PPFIAN SDYDVRY+S +S R+ P ++TL D I +HY R GP D F LW+GP + P R E L + WG R P +LY Q+LS +S SGA LA ++ C + + E + + +CC P +C P F+ +R+++P V ++ Sbjct: 301 ELWARVTGRLPRTANSLYEPPFIANFSDYDVRYVSLSSVGRSLPYRGYQTLHDADITEHY-LREFGPAWLEDRSFKLWLGPPQYSLAARSHLPGIVREEKGLFLPWGRDFRGEHIPFPGILYRQILSQGQVVGPSTAAGNAGPGNGSGCAWTGERKEGHRGPPAKSLTGVGAASATGSGAPIAGLAEIIPPTC------EKQEGEGTEPLHVLSNYLCCGP---AAPEWCHDPRFVASKMRDFYPLVEYY 540
BLAST of EWM24273.1 vs. NCBI_GenBank
Match: gi|585102674|gb|EWM22223.1| (hypothetical protein Naga_100312g6 [Nannochloropsis gaditana]) HSP 1 Score: 93.5893 bits (231), Expect = 9.529e-17 Identity = 118/484 (24.38%), Postives = 194/484 (40.08%), Query Frame = 0 Query: 49 IFLKYTGLVLRN-PAPL---CSWRLSQSLN--VAWTDTQASHHSMVMFLNEGEEYTVESE-SLPYSRFFSFQTYSLDGKTSYGILRDAEIVSQNGPNLYANMSAAAGGEKQGGYTLYLTPDGSKGYPNELQTLKYGQK-SGFFVLIFRIYDVGDFPHPMAPWAHLSRGDARQPQR---WGWTPPPRVSVR----RTMRQGSWREIPSCVTRQGPGGKLWSKTYILGLTNRLEDIFPPSHSYTGFIKPLRQNNFHLPHDH-LFSSVDTRTLVSAAAIPAVDVGDVWARVEAKLPRTPSSLYSPPFIANQSDYDVRYISFTSASRAFPLWTFETLTDKSIRQHYESRLRGPHEQWDGRFSLWIGPVNAPPPEQAR-----LENALIMR-WGEVAR---PALLYNQLLSSSRAASGAAPPTLANVVVNECPRAAEHDNHDEEDEDGSFINEGNVCCLSEPRGMPTFCRMPEFLHLNLREYFPAVTFF 507 +FL YT L A + C+W+ S LN +A+ D A +H + + +G + E P+ R+FS+Q+Y +RD EI S G N +A G +G Y +++T +G +GYPNEL T+ G +G FVL+ R+Y D + P + WG PP V + + + G W + C P + +I S TG+ + L N + ++S D + + G++ A + LP +P L++PPF+A+ + + RY+S ++ P +TL D I Y S+ G W+ R S V A A+ +A+ + WG+ AR PAL+ ++LS S R + N+ + S N C G+ C F ++ ++P VT++ Sbjct: 24 VFLSYTSYALAGLNASIEFNCAWQASVGLNFNIAFPDGYAVYHVLFVPKLQGPMDVIRIEGDYPFVRYFSYQSYDPKSLDPVASVRDYEIKSVRGVNPFATPGTTLG--DKGKYQVHVTLNGDQGYPNELPTIASGSNATGAFVLL-RVYAY----------------DKQSPDKTDIWGAVAPPVVKYKLFNPSSGQGGLWYTLDQCT----PNNTKIASQFI-------------STIATGYSRVLATENKAGANPCPTWNSRD--QFLDGGGVQ----GNLVAVITGTLPPSPGGLWTPPFVADFTKSNARYLSLSTYDLNIPGPVLQTLFDSDIVDFY-SQYYGSEYLWNLRNSRQYKIVAAADLASAKRCGHLTRDAMFLSTWGQTARVSYPALVLREILSQSS-------------------RIGDTANNTQ-----SIHNIKQAC--ESIAGVGAKCETSSFASSVMKNFYPKVTYY 438
BLAST of EWM24273.1 vs. NCBI_GenBank
Match: gi|585101524|gb|EWM21339.1| (hypothetical protein Naga_100075g21 [Nannochloropsis gaditana]) HSP 1 Score: 90.5077 bits (223), Expect = 1.423e-15 Identity = 86/314 (27.39%), Postives = 136/314 (43.31%), Query Frame = 0 Query: 93 EGEEYTVESESLPYSRFFSFQTYSLDGKTSYGILRDAEIVSQNGPNLYANMSAAAGGEKQGGYTLYLTPDGSKGYPNELQTLKYGQKSGFFVLIFRIYDVGDFPHPMAPWAHLSRGDARQPQRWGWTPPPRVSVRRTMRQGSWREIPSCVTR-QGPGGKL-----------WSKTYILGL-TNRLE-DIFPPSHSYTGFIKPLRQNNFHLPHDHLFSSVDTRTLVSAAAIPAVDVGDVWARVEAKLPRTPSSLYSPPFIANQSDYDVRYISFTSASRAFPLW-TFETLTDKSIRQHYESRLRGPHEQWDGRFSL 391 E E Y + + PY R+FSF Y + S L D +I +G N + ++ + G Y +Y++ DGSKGYPNE+ L+ S + +L FR+ + P A R + + + WG+ P V + R G W I C Q ++ W K +G N E +F P + P+ + + + + + + D R+ KLPRTP L+ +A+ + YD RY+SFTSA A PL+ ++ET+ D+ I HY + G WD ++L Sbjct: 155 EEEVYRIRGK-FPYVRYFSFTVYDASLQ-SISTLHDTDIRPSSGKNPFNDIEVTE--DNMGTYEIYVSKDGSKGYPNEMAALRPDSTSPYALLAFRL-------QLLDPRAGEDR--SGKNREWGYVDMPLVEI-LNHRNGEWDIIRRCSDEFQARTEEVIENLDLTFNTWWPKNLQIGTECNATEFSLFDPEQN------PIIRRGVAVRNAN-------ENYIFWCMPKEIGKKDYIIRITGKLPRTPYGLFDDIRVADTARYDSRYVSFTSAD-AIPLYPSYETIHDRDIFNHYSTDPFG--SDWDRMYNL 438
BLAST of EWM24273.1 vs. NCBI_GenBank
Match: gi|553192721|ref|XP_005855631.1| (hypothetical protein NGA_0673800 [Nannochloropsis gaditana CCMP526] >gi|422293420|gb|EKU20720.1| hypothetical protein NGA_0673800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 83.9593 bits (206), Expect = 2.141e-13 Identity = 104/372 (27.96%), Postives = 162/372 (43.55%), Query Frame = 0 Query: 65 CSWR---LSQSLNVAWTDTQASHHSMVMFLNEGEEYTVESESLPYS--RFFSFQTYSLDGKTSYGILRDAEIVSQNGPNLYANMSAAAGGEKQGGYTLYLTPDGSKGYPNEL----QTLKYGQ-KSGFFVLIFRIYDVGDFPHPMAPWAHLSRGDARQPQR--WGWTPPPRVSVRR------TMRQGSWREIPSC-VTRQGPGGKLWSKTYILGLTNRLEDIFPPSHSYTGFIKPLRQN---NF--HLPHDH----LFSSVDTRTLVSAAAIPAVDVGD-----VWARVEAKLPRTPSSLYSPPFIANQSDYDVRYISFTSASRAFPLWTFETLTDKSIRQHYESRLRGPHEQWDGRFSLWIGPVNAPPPEQ 403 C+W+ + NVA+ D QA + +VM + S P R+FS Q+ ++D ++D EI + P N A G YT+ +TP G +G NEL +++ Q +S V++ R Y D P P + + A QP +G+ PP V R+ + WR P+C TR L SK + + PP F P+R N NF +L D ++ ++D L++ A + ++ D + ARV LP T +L++ P IAN D DVRY+SF+S + T +TL D + + YE + + E W+ +S V A PE+ Sbjct: 134 CAWQAYITGKQYNVAYPDLQAIYQVLVMLKTTEKNIFRVRGSFPQEGVRYFSLQSNNVDVGFPISTIKDYEI-EVDDPENTRNPFAEDSDRPIGTYTINVTPRGDQGLKNELSLCPESMTDRQCRSVNAVMLMRFY-TSDPDRP--PVSSKTDPPASQPNDRLFGYATPPMVEERQFKSWTDDRSRDRWRVFPTCDQTRSTQVTSLISKHFY--------GMIPP------FAPPVRHNKNNNFVLYLGEDTATAGVYPNLDAAYLLAVAWQLSPELKDKPKKRLMARVTGTLPVTSRNLFTDPKIANYKDADVRYMSFSSIALVSGGPTMDTLDDAAFLRFYEPQ-QPEGEAWNRSYSF----VAAEDPER 482
BLAST of EWM24273.1 vs. NCBI_GenBank
Match: gi|585112738|gb|EWM30096.1| (hypothetical protein Naga_100193g4 [Nannochloropsis gaditana]) HSP 1 Score: 72.4034 bits (176), Expect = 5.693e-10 Identity = 92/325 (28.31%), Postives = 143/325 (44.00%), Query Frame = 0 Query: 108 RFFSFQTYSLDGKTSYGILRDAEIVSQNGPNLYANMSAAAGGEKQGGYTLYLTPDGSKGYPNEL----QTLKYGQ-KSGFFVLIFRIYDVGDFPHPMAPWAHLSRGDARQPQR--WGWTPPPRVSVRR------TMRQGSWREIPSC-VTRQGPGGKLWSKTYILGLTNRLEDIFPPSHSYTGFIKPLR---QNNF--HLPHDH----LFSSVDTRTLVSAAAIPAVDVGD-----VWARVEAKLPRTPSSLYSPPFIANQSDYDVRYISFTSASRAFPLWTFETLTDKSIRQHYESRLRGPHEQWDGRFSLWIGPVNAPPPEQA 404 R+FS Q+ ++D ++D EI + P N A G YT+ +TP G +G NEL +++ Q +S V++ R Y D P P + + A QP +G+ PP V R+ + WR P+C TR L SK + + PP F P+R NNF +L D ++ ++D L++ A + ++ D + ARV LP T +L++ P IAN D DVRY+SF+S + T +TL D + + YE + + E W+ +S V A PE+ Sbjct: 22 RYFSLQSNNVDVGFPISTIKDYEI-EVDDPENTRNPFAEDSDRPIGTYTINVTPRGDQGLKNELSLCPESMTDRQCRSVNAVMLMRFY-TSDPDRP--PVSSKTDPPASQPNDRLFGYATPPMVEERQFKSWTDDRSRDRWRVFPTCDQTRSTQVTSLISKHFY--------GMIPP------FAPPVRHNKNNNFVLYLGEDTATAGVYPNLDAAYLLAVAWQLSPELKDKPKKRLMARVTGTLPVTSRNLFTDPKIANYKDADVRYMSFSSIALVSGGPTMDTLDDAAFLRFYEPQ-QPEGEAWNRSYSF----VAAEDPERT 323
BLAST of EWM24273.1 vs. NCBI_GenBank
Match: gi|553186469|ref|XP_005854425.1| (hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526] >gi|422294638|gb|EKU21938.1| hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 66.6254 bits (161), Expect = 4.929e-8 Identity = 57/190 (30.00%), Postives = 87/190 (45.79%), Query Frame = 0 Query: 49 IFLKYTGLVLRN-PAPL---CSWRLSQSLN--VAWTDTQASHHSMVMFLNEGEEYTVESE-SLPYSRFFSFQTYSLDGKTSYGILRDAEIVSQNGPNLYANMSAAAGGEKQGGYTLYLTPDGSKGYPNELQTLKYGQK-SGFFVLIFRIYDVGDFPHPMAPWAHLSRGDARQPQR---WGWTPPPRVSVR 227 +FL YT L A + C+W+ S LN +A+ D A +H + + +G + E P+ R+FS+Q+Y +RD EI S G N +A G +G Y +++T +G +GYPNEL T+ G +G FVL+ R+Y D + P + WG PP V + Sbjct: 170 VFLSYTSYALAGLNASIEFNCAWQASVGLNFNIAFPDGYAVYHVLFVPKLQGPMDVIRIEGDYPFVRYFSYQSYDPKSLDPVASVRDYEIKSVRGVNPFATPGTTLG--DKGKYQVHVTLNGDQGYPNELPTIASGSNATGAFVLL-RVYAY----------------DKQSPDKTDIWGAVAPPVVKYK 340
BLAST of EWM24273.1 vs. NCBI_GenBank
Match: gi|553195208|ref|XP_005856101.1| (hypothetical protein NGA_0332100 [Nannochloropsis gaditana CCMP526] >gi|422292936|gb|EKU20237.1| hypothetical protein NGA_0332100 [Nannochloropsis gaditana CCMP526] >gi|585107747|gb|EWM25879.1| hypothetical protein Naga_100054g15 [Nannochloropsis gaditana]) HSP 1 Score: 66.6254 bits (161), Expect = 7.198e-8 Identity = 70/323 (21.67%), Postives = 126/323 (39.01%), Query Frame = 0 Query: 65 CSWRLS---QSLNVAWTDTQASHHSMVMFLNEGEEYTVESESLPYSRFFSFQTYSLDGK--TSYGILRDAEIVSQNGPNLYANMSAAAGGEKQGGYTLYLTPDGSKGYPNELQTLKYGQKSGFFVLIFRIYDVGDFPHPMAPWAHLSRGDARQPQRWGWTPPP--RVSVRRTMRQGSWREIPSCVTRQGPGGKLWSKTYI---LGLTNRLEDIFPPSHSY---TGFIKPLRQNNFHLPHDHLFSSVDTRTLVSAAAIPAVDVGDVWARVEAKLPRTPSSLYSPPFIANQSDYDVRYISFTSASRAFPLWTFETLTDKSIRQHY 374 C+++++ +++ + D + + H + + + + E P SR FS+ TY++ + + ++ D ++V+ G N + G G Y LY+TPDG +G+PNE++T G + I +Y V D + WG PPP RV + G W + C P + + +I L L + D+ + F+ F P ++ S R L+ A D+ + LP P+S D RY S + + P +++D+S+R Y Sbjct: 184 CAFQMTSGGDGVDMKFRDGKEALHIQFVPTTKATVFNFKGE-FPKSRAFSYATYAVANQQVSFVDMISDVDMVASTGSNPFTAGPGNTGAS--GSYDLYVTPDGKQGFPNEIKTFADGDVTNELSGIIIVYRV-------------IMADGIKSDGWGGVPPPALRVKAFSVLATGLWFNLAPC----NPKNDITIENFIENRLALKEGMSDVKVECDVFNMDNNFVYYDDAQYFKTPDENHIISCGNRALLPPGA-------DMITIISGTLP--PAS-------------DSRYASISLVNLYPPGRNVYSVSDQSLRNFY 464 The following BLAST results are available for this feature:
BLAST of EWM24273.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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