EWM24245.1, cds6412 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24245.1 vs. NCBI_GenBank
Match: gi|585105636|gb|EWM24245.1| (n6-adenine-specific [Nannochloropsis gaditana]) HSP 1 Score: 773.467 bits (1996), Expect = 0.000e+0 Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 0 Query: 1 MALSKPVMPLILDFSIPSTGMSCLQGNSFLKLALITLVLSLEGSPEMVQSFLVSKGCVQSLTVQTMSLSSHEENGHNSRKVDKRWQKKRRRVELGPDGLPVQPIHAPRQIRGAGDARKIHKLGGSQPSRSRKEQGKAWDLDTVGTAGGPSRLRIIGGSARGKRLDSPEVHLRPMMSKVREALFSTLFSFDLFGSRPPRVMDLFCGAGSVGLEALSRGAGEAVFVDMASECCECVERNLKLCNFDAVKGKIVRARAEEVLRQPKRLGVIGTFDLISITPPYEEVVYADLIRDVMESPAVAEDSLIVIEYPVELGSLPFNIGKGRLLGLRNRRYGRTVLAIYAVRPTGRRSGDLRPEEFDFAPSPLMDEGLRKCNLSDGENDY 381 MALSKPVMPLILDFSIPSTGMSCLQGNSFLKLALITLVLSLEGSPEMVQSFLVSKGCVQSLTVQTMSLSSHEENGHNSRKVDKRWQKKRRRVELGPDGLPVQPIHAPRQIRGAGDARKIHKLGGSQPSRSRKEQGKAWDLDTVGTAGGPSRLRIIGGSARGKRLDSPEVHLRPMMSKVREALFSTLFSFDLFGSRPPRVMDLFCGAGSVGLEALSRGAGEAVFVDMASECCECVERNLKLCNFDAVKGKIVRARAEEVLRQPKRLGVIGTFDLISITPPYEEVVYADLIRDVMESPAVAEDSLIVIEYPVELGSLPFNIGKGRLLGLRNRRYGRTVLAIYAVRPTGRRSGDLRPEEFDFAPSPLMDEGLRKCNLSDGENDY Sbjct: 1 MALSKPVMPLILDFSIPSTGMSCLQGNSFLKLALITLVLSLEGSPEMVQSFLVSKGCVQSLTVQTMSLSSHEENGHNSRKVDKRWQKKRRRVELGPDGLPVQPIHAPRQIRGAGDARKIHKLGGSQPSRSRKEQGKAWDLDTVGTAGGPSRLRIIGGSARGKRLDSPEVHLRPMMSKVREALFSTLFSFDLFGSRPPRVMDLFCGAGSVGLEALSRGAGEAVFVDMASECCECVERNLKLCNFDAVKGKIVRARAEEVLRQPKRLGVIGTFDLISITPPYEEVVYADLIRDVMESPAVAEDSLIVIEYPVELGSLPFNIGKGRLLGLRNRRYGRTVLAIYAVRPTGRRSGDLRPEEFDFAPSPLMDEGLRKCNLSDGENDY 381
BLAST of EWM24245.1 vs. NCBI_GenBank
Match: gi|553194699|ref|XP_005856016.1| (n6-adenine-specific methylase, partial [Nannochloropsis gaditana CCMP526] >gi|553196322|ref|XP_005856319.1| n6-adenine-specific methylase, partial [Nannochloropsis gaditana CCMP526] >gi|422292740|gb|EKU20042.1| n6-adenine-specific methylase, partial [Nannochloropsis gaditana CCMP526] >gi|422293042|gb|EKU20343.1| n6-adenine-specific methylase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 735.332 bits (1897), Expect = 0.000e+0 Identity = 362/363 (99.72%), Postives = 363/363 (100.00%), Query Frame = 0 Query: 19 TGMSCLQGNSFLKLALITLVLSLEGSPEMVQSFLVSKGCVQSLTVQTMSLSSHEENGHNSRKVDKRWQKKRRRVELGPDGLPVQPIHAPRQIRGAGDARKIHKLGGSQPSRSRKEQGKAWDLDTVGTAGGPSRLRIIGGSARGKRLDSPEVHLRPMMSKVREALFSTLFSFDLFGSRPPRVMDLFCGAGSVGLEALSRGAGEAVFVDMASECCECVERNLKLCNFDAVKGKIVRARAEEVLRQPKRLGVIGTFDLISITPPYEEVVYADLIRDVMESPAVAEDSLIVIEYPVELGSLPFNIGKGRLLGLRNRRYGRTVLAIYAVRPTGRRSGDLRPEEFDFAPSPLMDEGLRKCNLSDGENDY 381 TGMSCLQGNSFLKLALITLVLSLEGSPEMVQSFLVSKGCVQSLTVQTMSLSSHEENGHNSRKVDKRWQKKRRRVELGPDGLPVQPIHAPRQIRGAGDARKIH+LGGSQPSRSRKEQGKAWDLDTVGTAGGPSRLRIIGGSARGKRLDSPEVHLRPMMSKVREALFSTLFSFDLFGSRPPRVMDLFCGAGSVGLEALSRGAGEAVFVDMASECCECVERNLKLCNFDAVKGKIVRARAEEVLRQPKRLGVIGTFDLISITPPYEEVVYADLIRDVMESPAVAEDSLIVIEYPVELGSLPFNIGKGRLLGLRNRRYGRTVLAIYAVRPTGRRSGDLRPEEFDFAPSPLMDEGLRKCNLSDGENDY Sbjct: 1 TGMSCLQGNSFLKLALITLVLSLEGSPEMVQSFLVSKGCVQSLTVQTMSLSSHEENGHNSRKVDKRWQKKRRRVELGPDGLPVQPIHAPRQIRGAGDARKIHELGGSQPSRSRKEQGKAWDLDTVGTAGGPSRLRIIGGSARGKRLDSPEVHLRPMMSKVREALFSTLFSFDLFGSRPPRVMDLFCGAGSVGLEALSRGAGEAVFVDMASECCECVERNLKLCNFDAVKGKIVRARAEEVLRQPKRLGVIGTFDLISITPPYEEVVYADLIRDVMESPAVAEDSLIVIEYPVELGSLPFNIGKGRLLGLRNRRYGRTVLAIYAVRPTGRRSGDLRPEEFDFAPSPLMDEGLRKCNLSDGENDY 363
BLAST of EWM24245.1 vs. NCBI_GenBank
Match: gi|299116748|emb|CBN74861.1| (putative S-adenosylmethionine-dependent methyltransferase [Ectocarpus siliculosus]) HSP 1 Score: 249.21 bits (635), Expect = 2.561e-76 Identity = 133/280 (47.50%), Postives = 184/280 (65.71%), Query Frame = 0 Query: 82 DKRWQKKRRRVELGPD--GLPVQPIHAPRQIRGAGDARKIHKLGGSQPSRSRKEQGKAWDLDTVGTAGGPSRLRIIGGSARGKRLDSPEVHLRPMMSKVREALFSTLFSFDLFGSRPPRVMDLFCGAGSVGLEALSRGAGEAVFVDMASECCECVERNLKLCNFDAVKGKIVRARAEEVLRQPKRLGVIGTFDLISITPPYEEVVYADLIRDVMESPAVAEDSLIVIEYPVELGSLPFNIGKGRLLGLRNRRYGRTVLAIYAVRPTGRRSG--DLRPEEF 357 D+R+++K R L D GLP + I+APRQ A +GG+ + QG+ ++ A RL++ GG A+G+RL+SP+V LRPMM+KV+EALFSTL F +F + R +DLF G+GSVG+EALSRGAG A FVD A +CC+ RN LC F + + K V+ +VL P+R G+ FD+I++TPPYEEVVY +L++ + S VA+D+L+VIEYPVELG +P IG G ++GLRNRRYGRTV+ ++ P+G+ D RPEEF Sbjct: 88 DQRYRRKARGANLRRDDTGLPSEKIYAPRQ-----SAYGTPTVGGTGRPGKVRPQGEEREVSINNAA----RLKVAGGIAKGRRLESPDVFLRPMMAKVKEALFSTLMGFGVFETEDARFLDLFSGSGSVGIEALSRGAGHATFVDFAKDCCDVCLRNANLCGF-SDQAKAVKGDVMDVLYNPRRYGLDAPFDVITVTPPYEEVVYTELVKALSVSDLVAQDTLVVIEYPVELGCMPHAIGDGTMVGLRNRRYGRTVVGVWVYLPSGQFGDMLDSRPEEF 357
BLAST of EWM24245.1 vs. NCBI_GenBank
Match: gi|873233224|emb|CEM03521.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 233.032 bits (593), Expect = 6.379e-69 Identity = 128/315 (40.63%), Postives = 188/315 (59.68%), Query Frame = 0 Query: 63 VQTMSLSSHEENGHNSRKVDKRWQKKRRRVELGPDGLPVQPIHAPRQIRGAGDARKIHKLGGSQP------SRSRKEQGKAWDLDTVGTAGGPSRLRIIGGSARGKRLDSPEVHLRPMMSKVREALFSTLFSFDLFGSRPP-RVMDLFCGAGSVGLEALSRGAGEAVFVDMASECCECVERNLKLCNFDAVKGKIVRARAEEVLRQPKRLGVIGTFDLISITPPYEEVVYADLIRDVMESPAVAEDSLIVIEYPVELGSLPFNIGKGRLLGLRNRRYGRTVLAIYAVRPTGRRSGDLRPEEFDFAPSPLMDEGLR 370 ++ + L ++ + R+ + +RR + +G+P + A RQ+RG D + +KL P R+ QG+ GT PS LR+ GG +G++L SP V+LRPMM+KVREA+F+ L F +F P +DL+ G G+VG+EALSRGA FVD++ ECC+ V NL+ CNF +G+++RA EE LR P R + DL+ + PPYEEVVY+ L+ + SP + ED++++IEYP E+G+LP +G GRL+GLRNR+YGRTVL ++ PTGR D P +F P L + L+ Sbjct: 137 IEDLGLFEGDDVADDDRREKPKQPPRRREISRDSEGVPDSRLVASRQVRG--DMKTRYKLLKMPPPLKESGGSPRRTQGRV----QAGT-NNPSMLRVGGGVMKGRKLTSPPVYLRPMMAKVREAVFNMLTQFGVFDQEEPITFLDLYSGTGAVGIEALSRGAASGTFVDLSKECCQSVVHNLRQCNFQP-QGRVIRADVEETLRYPGRFALRDAVDLVFVCPPYEEVVYSRLVSCIASSPLIKEDTIVLIEYPSEIGTLPPVMGDGRLVGLRNRKYGRTVLGVFIADPTGR--FDAEPRAHEFVPVHLTKKALK 441
BLAST of EWM24245.1 vs. NCBI_GenBank
Match: gi|219130778|ref|XP_002185534.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403065|gb|EEC43021.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 220.705 bits (561), Expect = 3.664e-67 Identity = 113/213 (53.05%), Postives = 152/213 (71.36%), Query Frame = 0 Query: 152 LRIIGGSARGKRLDSPEVHLRPMMSKVREALFSTLFSFDLFG-SRPPRVMDLFCGAGSVGLEALSRGAGEAVFVDMASECCECVERNLKLCNFDAVKGKIVRARAEEVLRQPKRLGV--IGTFDLISITPPYEEVVYADLIRDVMESPAVAEDSLIVIEYPVELGSLPFNIGK---GRLLGLRNRRYGRTVLAIYAVRPTGR-RSGDLRPEEF 357 LRI G+A+G+RLDSP V+LRPMM KVREA++ST +F L+ + R +D+F G+GSVGLE+LSRGA FVD++ +CC VERN+K C+F A K +IV A +VL +P G+ + T+ L+++ PPYEE+VY DLI V SP V +D++++IEYPVELG LP + + G ++G+RNRRYGRTV+AIY V PTGR RPEEF Sbjct: 2 LRIAAGTAKGRRLDSPNVYLRPMMGKVREAVYSTFTAFGLYDPATTTRHLDIFAGSGSVGLESLSRGAAHCTFVDLSEDCCSAVERNVKWCDF-AGKEQIVCGEAIQVLNEPFAAGIPELQTYQLVTLCPPYEEIVYGDLIEAVANSPVVTDDTVVLIEYPVELGCLPHVVRRRDGGAMVGVRNRRYGRTVIAIYVVNPTGRLEVAYSRPEEF 213
BLAST of EWM24245.1 vs. NCBI_GenBank
Match: gi|223992627|ref|XP_002285997.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220977312|gb|EED95638.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 217.238 bits (552), Expect = 1.774e-65 Identity = 114/226 (50.44%), Postives = 156/226 (69.03%), Query Frame = 0 Query: 149 PSRLRIIGGSARGKRLDSPEVHLRPMMSKVREALFSTLFSFDLFGSR-----------PPRVMDLFCGAGSVGLEALSRGAGEAVFVDMASECCECVERNLKLCNFDAVKGKIVRARAEEVLRQPKRLGVIGT--FDLISITPPYEEVVYADLIRDVMESPAVAEDSLIVIEYPVELGSLPFNIGK---GRLLGLRNRRYGRTVLAIYAVRPTG-RRSGDLRPEEF 357 PS LRI+GGS RG++L+SP V+LRPMM KV+EA++ST SF L+ + R +D+F G+GSVGLE+LSRGA FVDM+++CC ERN+ C + + K+V A LRQP+ +G+ + +DL+++ PPYEE+VYADL+ V S V ED++I+IEYPVELG LP IG+ G L+G+RNR+YGRTV+A+Y V PTG R + + RPEEF Sbjct: 13 PSNLRILGGSVRGRKLESPTVYLRPMMGKVKEAVYSTFTSFGLYENNQNIGGGGTGTCSTRHLDIFSGSGSVGLESLSRGARHCTFVDMSNDCCGACERNIVRCGGEPI-AKVVCTDAFRALRQPETVGIDPSCKYDLVTLCPPYEEIVYADLLDAVANSELVTEDTVILIEYPVELGCLPHAIGREDGGVLIGIRNRKYGRTVIAMYIVNPTGARETAESRPEEF 237
BLAST of EWM24245.1 vs. NCBI_GenBank
Match: gi|397616529|gb|EJK64018.1| (hypothetical protein THAOC_15292 [Thalassiosira oceanica]) HSP 1 Score: 216.853 bits (551), Expect = 2.392e-64 Identity = 114/235 (48.51%), Postives = 156/235 (66.38%), Query Frame = 0 Query: 149 PSRLRIIGGSARGKRLDSPEVHLRPMMSKVREALFSTLFSFDLF---GSRP--PRVMDLFCGAGSVGLEALSRGAGEAVFVDMASECCECVERNLKLCNFDAVK---------------GKIVRARAEEVLRQPKRLGVI--GTFDLISITPPYEEVVYADLIRDVMESPAVAEDSLIVIEYPVELGSLPFNIGK---GRLLGLRNRRYGRTVLAIYAVRPTG-RRSGDLRPEEF 357 PS LR++GGS RG++L+SP V+LRPMM KV+EA++ST SF + G +P R +D+F G+GSVGLE+LSRGA FVDM+S+CC ERN++ C FD +V A LR+P+ +G+ +DL+++ PPYEE+VYA+L+ V S V ED++I++EYPVELG LP IG+ G L+G+RNR+YGRTV+A+Y V PTG R S + RPEEF Sbjct: 80 PSNLRVLGGSVRGRKLESPTVYLRPMMGKVKEAVYSTFTSFGFYDGVGGQPCTTRHLDIFSGSGSVGLESLSRGAKHCTFVDMSSDCCGACERNIERCGFDGWNEGGIGTEVGDSGEPVANVVCTDAYRALREPETVGIDPEAKYDLVTLCPPYEEIVYAELLDAVANSKLVKEDTVILVEYPVELGCLPHVIGREDGGVLIGVRNRKYGRTVIAMYIVNPTGDRESAESRPEEF 314
BLAST of EWM24245.1 vs. NCBI_GenBank
Match: gi|1072234916|gb|OEU19645.1| (Cons_hypoth95-domain-containing protein, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 208.764 bits (530), Expect = 1.499e-62 Identity = 107/214 (50.00%), Postives = 149/214 (69.63%), Query Frame = 0 Query: 152 LRIIGGSARGKRLDSPEVHLRPMMSKVREALFSTLFSFDLFGSRPPRVMDLFCGAGSVGLEALSRGAGEAVFVDMASECCECVERNLKLCNFDA--VKGKIVRARAEEVLRQPKRLGVIG--TFDLISITPPYEEVVYADLIRDVMESPAVAEDSLIVIEYPVEL-GSLP--FNIGKGRLLGLRNRRYGRTVLAIYAVRPTGR-RSGDLRPEEF 357 L+I+GG+ARG RLDSP V+LRPMM KVREA++ST SFDL+ P R +DLF G+GSVGLE++SRGA F D++ +CC + RN+ C FD +I+ + ++LR P +G+ T+++++I PPYEEV YADL+ SP V +D++I+IEYPVEL G LP +N K ++G+RNR+YGRTV+A+Y PTG+ + RPEEF Sbjct: 1 LKILGGTARGLRLDSPTVYLRPMMGKVREAVYSTFQSFDLY-DYPVRHLDLFSGSGSVGLESMSRGAKHCTFCDLSRDCCGAISRNIPWCKFDGEDYSTRIICSDVLQLLRDPVSVGIPAGETYNILTICPPYEEVTYADLLDAAAGSPVVTDDTIILIEYPVELWGDLPHVYNGDKVTMIGIRNRKYGRTVIAMYICNPTGKIDKAESRPEEF 213
BLAST of EWM24245.1 vs. NCBI_GenBank
Match: gi|551670488|ref|XP_005838002.1| (hypothetical protein GUITHDRAFT_151135 [Guillardia theta CCMP2712] >gi|428182160|gb|EKX51022.1| hypothetical protein GUITHDRAFT_151135 [Guillardia theta CCMP2712]) HSP 1 Score: 197.978 bits (502), Expect = 7.213e-57 Identity = 110/233 (47.21%), Postives = 153/233 (65.67%), Query Frame = 0 Query: 130 SRKEQGKAWDLDTVGTAGGPSRLRIIGGSARGKRLDSPEVHLRPMMSKVREALFSTLFSFDLFGSRPPRVMDLFCGAGSVGLEALSRGAGEAVFVDMASECCECVERNLKLCNFDAVKGKIVRARAEEVLRQP----KRLGVIGTFDLISITPPYEEVVYADLIRDVMESPAVAEDS-LIVIEYPVELGSLPFNIGKGRLLGLRNRRYGRTVLAIYAVRPTGRRSGDLRPEEF 357 S K QGK WD P +R+ GG+A+G++L+ PEV+LRPMM KV+EALFS L FD+ +D F G GSVG+EALSRG G+AVFVD + E C + NL++C F+ +G +V ++AE + P ++G G FDL+++TPPYEEV Y DL+ + +S + D ++V+EYP+ELGSLP +G RL+G+RNR+YGRT+LAIYA P + RP+EF Sbjct: 93 SVKVQGKGWD----NILPKPPTIRVAGGTAKGRKLNRPEVYLRPMMGKVKEALFSILTEFDVL-RDDAIALDTFAGCGSVGIEALSRGVGKAVFVDYSKEACNTIRGNLEVCEFED-RGMVVCSKAEAIYDDPVQVLAKMGGKG-FDLLTMTPPYEEVDYGDLLGRITKSEHLMNDGCIVVVEYPIELGSLPPVVGN-RLVGMRNRKYGRTMLAIYACNPGSNM--EPRPQEF 315
BLAST of EWM24245.1 vs. NCBI_GenBank
Match: gi|544214417|ref|XP_005537355.1| (similar to N6-adenine-specific methylase [Cyanidioschyzon merolae strain 10D] >gi|449017917|dbj|BAM81319.1| similar to N6-adenine-specific methylase [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 196.052 bits (497), Expect = 7.344e-56 Identity = 117/274 (42.70%), Postives = 164/274 (59.85%), Query Frame = 0 Query: 97 DGLPVQPIHAPRQI------RGAGDARKIHKL---GGSQPSRSRKEQGKAWDLDTVGTAGGPSRLRIIGGSARGKRLDSPEVHLRPMMSKVREALFSTLFSFDLFGSRPP-RVMDLFCGAGSVGLEALSRGAGEAVFVDMASECCECVERNLKLCNFDAVKGKIVRARAEEVLRQPKRLGVIGTFDLISITPPYEEVVYADLIRDVMESPAVAEDSLIVIEYPVELGSLPFNIGKGRLLGLRNRRYGRTVLAIYAVRPTGRRSGDLRPEEFDFA 360 DG+P + AP+Q RG + + +K+ G + P R+ Q A L+ RLRI GG+ARG+RL+SP V++RP M++VREA FS L + SR P R +DLFCGAG++G EALSRGA AVFVD + ECC CV RN+ + EE L G ++++TPPYEE+ Y +L+R + +S ++E +++++EYP ELGSLP I + RL+G+RNRRYGRTVL +YA +P + D+R EEF A Sbjct: 85 DGVPAEEPGAPQQAKPKRFPRGRYEQMRKYKVIRQGVTLPGGRRRWQKVAIPLE--------PRLRITGGTARGRRLESPPVYVRPAMAQVREACFSILRELQILPSRQPVRFLDLFCGAGTMGFEALSRGASSAVFVDRSPECCACVRRNMSKLGVGEGIALVRETTVEEYLAT----APDGVLQIVALTPPYEEISYDELLRTLSQSAVISERTVVMLEYPYELGSLPPVI-ENRLIGMRNRRYGRTVLGMYACQPDP--NWDMRTEEFTDA 343 The following BLAST results are available for this feature:
BLAST of EWM24245.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|