EWM24283.1, cds6404 (CDS) Nannochloropsis gaditana

Overview
NameEWM24283.1
Unique Namecds6404
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:477520..477855 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24283.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100020g61.5416.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:477520..477855 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM24283.1 vs. NCBI_GenBank
Match: gi|585105674|gb|EWM24283.1| (hypothetical protein Naga_100020g61 [Nannochloropsis gaditana])

HSP 1 Score: 221.861 bits (564), Expect = 2.514e-73
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0 
Query:    1 MEARATALYLLSMRGRASFQSVVRNKKISIFSRKKSVSFFLDVIDFRQRNKNLRTKMINNYKDYIFHFLLHIALSAETPLSLIFHFFFSLSFSFFDLGPAHSLAGRHDFPL 111
            MEARATALYLLSMRGRASFQSVVRNKKISIFSRKKSVSFFLDVIDFRQRNKNLRTKMINNYKDYIFHFLLHIALSAETPLSLIFHFFFSLSFSFFDLGPAHSLAGRHDFPL
Sbjct:    1 MEARATALYLLSMRGRASFQSVVRNKKISIFSRKKSVSFFLDVIDFRQRNKNLRTKMINNYKDYIFHFLLHIALSAETPLSLIFHFFFSLSFSFFDLGPAHSLAGRHDFPL 111
The following BLAST results are available for this feature:
BLAST of EWM24283.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585105674|gb|EWM24283.1|2.514e-73100.00hypothetical protein Naga_100020g61 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6420rna6420Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications