EWM24217.1, cds6403 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24217.1 vs. NCBI_GenBank
Match: gi|585105608|gb|EWM24217.1| (Cyclophilin-like peptidyl-prolyl cis-trans isomerase domain protein [Nannochloropsis gaditana]) HSP 1 Score: 608.216 bits (1567), Expect = 0.000e+0 Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0 Query: 1 MWKQVLLFVTLFSQAAGFLPGHSRISVTRSSIRSRYARKALAMEFVDVMLQKPMGIVLEENDPKLQGVYVKSLSQGGAAAASGKIQAGDHLVSVQGEMVTGKDLDAVLSTVGNAPSESVQMRFYRGALGDLINPQVWFDIDIGGERAGRITCRLRKDVVPKTAENFRALCTGEKGFGYKNSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGAKFDDENFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTEGLDILKKIEAVGSQVGKTSVPVMIADCGQLS 295 MWKQVLLFVTLFSQAAGFLPGHSRISVTRSSIRSRYARKALAMEFVDVMLQKPMGIVLEENDPKLQGVYVKSLSQGGAAAASGKIQAGDHLVSVQGEMVTGKDLDAVLSTVGNAPSESVQMRFYRGALGDLINPQVWFDIDIGGERAGRITCRLRKDVVPKTAENFRALCTGEKGFGYKNSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGAKFDDENFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTEGLDILKKIEAVGSQVGKTSVPVMIADCGQLS Sbjct: 1 MWKQVLLFVTLFSQAAGFLPGHSRISVTRSSIRSRYARKALAMEFVDVMLQKPMGIVLEENDPKLQGVYVKSLSQGGAAAASGKIQAGDHLVSVQGEMVTGKDLDAVLSTVGNAPSESVQMRFYRGALGDLINPQVWFDIDIGGERAGRITCRLRKDVVPKTAENFRALCTGEKGFGYKNSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGAKFDDENFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTEGLDILKKIEAVGSQVGKTSVPVMIADCGQLS 295
BLAST of EWM24217.1 vs. NCBI_GenBank
Match: gi|551678347|ref|XP_005841926.1| (hypothetical protein GUITHDRAFT_83873, partial [Guillardia theta CCMP2712] >gi|428186095|gb|EKX54946.1| hypothetical protein GUITHDRAFT_83873, partial [Guillardia theta CCMP2712]) HSP 1 Score: 321.242 bits (822), Expect = 4.933e-106 Identity = 151/276 (54.71%), Postives = 194/276 (70.29%), Query Frame = 0 Query: 22 HSRISVTRSSIRSRYARKALAMEFVDVMLQKPMGIVLEENDPKLQGVYVKSLSQGGAAAAS-----GKIQAGDHLVSVQGEMVTGKDLDAVLSTVGNAPSESVQMRFYRGALGDLINPQVWFDIDIGGERAGRITCRLRKDVVPKTAENFRALCTGEKGFGYKNSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGAKFDDENFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTEGLDILKKIEAVGSQVGKTSVPVMIADCG 292 R + R++ SR+ E V ++KPMG+V EEND + +G+ VK + + A A+ KI D+L+ V GE GK D + + P++ +++ F RG + + NP+VWFDI+IGGE+AGRI LRKD PKT ENFR LC+GE+G+GYK FHRVIPGFMCQGGDFT+GDG GG+SIYG F DENF+L HD GILSMANAGPNTNGSQFF+CTV TP+LDGKHVVFG+V +G++++K IEAVGS GKT+ V+IADCG Sbjct: 65 QKRKAKARAAFDSRF-------EAYTVTMKKPMGLVFEENDSQAKGILVKKIDKASADQANLFNLENKISIRDYLLRVNGESCLGKSFDEAFAMIAENPAQELELTFARGGVEAVYNPRVWFDIEIGGEKAGRIKIELRKDAAPKTVENFRKLCSGEEGYGYKGCTFHRVIPGFMCQGGDFTNGDGTGGRSIYGKTFADENFDLKHDKAGILSMANAGPNTNGSQFFICTVPTPFLDGKHVVFGEVEDGMEVVKAIEAVGSSSGKTAAKVVIADCG 333
BLAST of EWM24217.1 vs. NCBI_GenBank
Match: gi|299471368|emb|CBN79323.1| (cyclophilin [Ectocarpus siliculosus]) HSP 1 Score: 303.523 bits (776), Expect = 3.602e-99 Identity = 147/253 (58.10%), Postives = 181/253 (71.54%), Query Frame = 0 Query: 44 EFVDVMLQKPMGIVLEENDPKLQGVYVKSLSQGGAAAASGKIQAGDHLVSVQGEMVTGKDLDAVLSTVGNAPSESVQMRFYRGALGDLINPQVWFDIDIGGERAGRITCRLRKDVVPKTAENFRALCTGE--KGFGYKNSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGAKFDDENFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTEGLDILKKIEAVGSQVGKTSVPVMIADCGQL 294 E ++V L+KPMG+VLEEN G+ VK ++ GG+A G ++ GD L+ VQGE V G D D + + +AP + V+++ +RG DL NPQV+FDI+I GE GRI +LR DVVPKTAENFR LCTGE G +K + FHRVIPGFM QGGDF + DG GG SIYGAKF+DENF L H GPG+LSMANAGP TNGSQFF+C +TPWLD KHVVFG+V +G +K IE +GS GK S + I DCGQL Sbjct: 84 EKLEVSLKKPMGLVLEENVGGFGGLRVKEVADGGSAQEDGTVRVGDQLLEVQGENVKGIDFDEGMKKLMDAPEDGVKLKLFRGLTADLYNPQVYFDIEINGEDKGRILMQLRSDVVPKTAENFRQLCTGEAPDGKSFKGTIFHRVIPGFMLQGGDFDNADGTGGSSIYGAKFEDENFNLKHTGPGVLSMANAGPGTNGSQFFICVAKTPWLDDKHVVFGEVVDGARTVKDIELLGSSGGKPSKKIKIVDCGQL 336
BLAST of EWM24217.1 vs. NCBI_GenBank
Match: gi|289064183|gb|ADC80505.1| (peptidyl prolyl cis-trans isomerase A (II) [Conus novaehollandiae]) HSP 1 Score: 270.781 bits (691), Expect = 8.431e-89 Identity = 126/164 (76.83%), Postives = 142/164 (86.59%), Query Frame = 0 Query: 131 LINPQVWFDIDIGGERAGRITCRLRKDVVPKTAENFRALCTGEKGFGYKNSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGAKFDDENFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTEGLDILKKIEAVGSQVGKTSVPVMIADCGQL 294 + NPQV+FDI IGG+ AGRI LR DVVPKTAENFRALCTGEKGFGYK S+FHRVIPGFMCQGGDFT+ +G GGKSIYG KF+DENF+L H PGILSMANAGPNTNGSQFFLCTV+T WLDGKHVVFG V EG+D++K +E +GSQ G TS+ V+IADCGQL Sbjct: 1 MANPQVFFDITIGGQPAGRIVMELRADVVPKTAENFRALCTGEKGFGYKGSSFHRVIPGFMCQGGDFTNHNGTGGKSIYGNKFEDENFKLKHTEPGILSMANAGPNTNGSQFFLCTVKTTWLDGKHVVFGSVVEGMDVVKAMEKLGSQSGATSLKVVIADCGQL 164
BLAST of EWM24217.1 vs. NCBI_GenBank
Match: gi|224010722|ref|XP_002294318.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220969813|gb|EED88152.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 269.626 bits (688), Expect = 2.377e-88 Identity = 125/162 (77.16%), Postives = 138/162 (85.19%), Query Frame = 0 Query: 133 NPQVWFDIDIGGERAGRITCRLRKDVVPKTAENFRALCTGEKGFGYKNSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGAKFDDENFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTEGLDILKKIEAVGSQVGKTSVPVMIADCGQL 294 NPQV+FDI IGG+ AGR+ LR DVVPKTAENFRALCTGEKGFGY S+FHRVIPGFMCQGGDFT+ +G GGKSIYG KF DENF+LTH GPGILSMANAGPNTNGSQFFLCT ET WLDGKH VFG+VT+G+D++K IE+VGS G T PVMIA GQL Sbjct: 2 NPQVYFDITIGGKPAGRVIMELRADVVPKTAENFRALCTGEKGFGYAGSSFHRVIPGFMCQGGDFTNHNGTGGKSIYGTKFPDENFKLTHTGPGILSMANAGPNTNGSQFFLCTAETGWLDGKHTVFGKVTQGMDVVKAIESVGSNSGATKAPVMIAASGQL 163
BLAST of EWM24217.1 vs. NCBI_GenBank
Match: gi|303285834|ref|XP_003062207.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226456618|gb|EEH53919.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 269.24 bits (687), Expect = 3.897e-88 Identity = 124/165 (75.15%), Postives = 141/165 (85.45%), Query Frame = 0 Query: 131 LINPQVWFDIDIGGERAGRITCRLRKDVVPKTAENFRALCTGEKGFGYKNSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGAKFDDENFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTEGLDILKKIEAVGSQVGKTSVPVMIADCGQLS 295 + NP V+FD+ +GG AGRI LR DV PKTAENFRALCTGEKGFG+K S+FHRVIP FMCQGGDFT+ +G GGKSIYG KF DENF+L H GPG+LSMANAGPNTNGSQFFLCTV+T WLDGKHVVFG VT+G+D++K IEAVG+ GKT+ PVMIADCGQLS Sbjct: 1 MANPVVFFDMTVGGAPAGRIEMTLRADVAPKTAENFRALCTGEKGFGFKASSFHRVIPDFMCQGGDFTNHNGTGGKSIYGEKFADENFQLKHTGPGVLSMANAGPNTNGSQFFLCTVQTAWLDGKHVVFGNVTKGMDVVKAIEAVGTSSGKTTKPVMIADCGQLS 165
BLAST of EWM24217.1 vs. NCBI_GenBank
Match: gi|1146076000|gb|AQQ10877.1| (peptidyl prolyl cis trans isomerase A, partial [Conus miles]) HSP 1 Score: 267.314 bits (682), Expect = 1.939e-87 Identity = 124/164 (75.61%), Postives = 140/164 (85.37%), Query Frame = 0 Query: 131 LINPQVWFDIDIGGERAGRITCRLRKDVVPKTAENFRALCTGEKGFGYKNSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGAKFDDENFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTEGLDILKKIEAVGSQVGKTSVPVMIADCGQL 294 + P+ +FDI IGG+ +GRI LR DVVPKTAENFRALCTGEKGFGYK S+FHRVIP FMCQGGDFT+ +G GGKSIYG KF DENF+L H GPGILSMANAGPNTNGSQFFLCT +T WLDGKHVVFG V EG+D++KKIE+VGSQ GKT+ V+IADCGQL Sbjct: 1 MSKPKCYFDIAIGGQNSGRIVMELRADVVPKTAENFRALCTGEKGFGYKGSSFHRVIPDFMCQGGDFTNHNGTGGKSIYGEKFADENFQLKHTGPGILSMANAGPNTNGSQFFLCTAKTQWLDGKHVVFGSVVEGMDLVKKIESVGSQSGKTTKKVVIADCGQL 164
BLAST of EWM24217.1 vs. NCBI_GenBank
Match: gi|551611911|ref|XP_005787022.1| (peptidyl-prolyl cis-trans isomerase [Emiliania huxleyi CCMP1516] >gi|485640346|gb|EOD34593.1| peptidyl-prolyl cis-trans isomerase [Emiliania huxleyi CCMP1516]) HSP 1 Score: 266.929 bits (681), Expect = 2.781e-87 Identity = 125/160 (78.12%), Postives = 140/160 (87.50%), Query Frame = 0 Query: 136 VWFDIDIGGERAGRITCRLRKDVVPKTAENFRALCTGEKGFGYKNSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGAKFDDENFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTEGLDILKKIEAVGSQVGKTSVPVMIADCGQLS 295 V+FD+ IGG AGRI LR D+VPKTAENFRALCTGEKGFGYK SAFHRVI FMCQGGDFT+G+G GGKSIYGAKF DENF+L H GPGILSMANAGP TNGSQFFLCTV+T WLDGKHVVFG VT+G++++K IEAVGSQ GKT+ PV+IADCGQ+S Sbjct: 5 VYFDMTIGGAPAGRIEMTLRDDIVPKTAENFRALCTGEKGFGYKGSAFHRVITNFMCQGGDFTAGNGTGGKSIYGAKFADENFQLKHTGPGILSMANAGPGTNGSQFFLCTVKTDWLDGKHVVFGSVTKGMEVVKAIEAVGSQSGKTAKPVVIADCGQIS 164
BLAST of EWM24217.1 vs. NCBI_GenBank
Match: gi|551573513|ref|XP_005772560.1| (hypothetical protein EMIHUDRAFT_369290 [Emiliania huxleyi CCMP1516] >gi|485624006|gb|EOD20131.1| hypothetical protein EMIHUDRAFT_369290 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 266.544 bits (680), Expect = 3.988e-87 Identity = 126/160 (78.75%), Postives = 140/160 (87.50%), Query Frame = 0 Query: 136 VWFDIDIGGERAGRITCRLRKDVVPKTAENFRALCTGEKGFGYKNSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGAKFDDENFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTEGLDILKKIEAVGSQVGKTSVPVMIADCGQLS 295 V+FD+ IGG AGRI LR DVVPKTAENFRALCTGEKGFGYK SAFHRVI FMCQGGDFT+G+G GGKSIYGAKF DENF+L H GPGILSMANAGP TNGSQFFLCTV+T WLDGKHVVFG VT+G++++K IEAVGSQ GKT+ PV+IADCGQ+S Sbjct: 5 VFFDMTIGGAPAGRIEMTLRDDVVPKTAENFRALCTGEKGFGYKGSAFHRVITNFMCQGGDFTAGNGTGGKSIYGAKFADENFQLKHTGPGILSMANAGPGTNGSQFFLCTVKTDWLDGKHVVFGSVTKGMEVVKAIEAVGSQSGKTAKPVVIADCGQIS 164
BLAST of EWM24217.1 vs. NCBI_GenBank
Match: gi|557133082|gb|AGZ87977.1| (peptidyl-prolyl cis-trans isomerase A [Conus textile]) HSP 1 Score: 266.544 bits (680), Expect = 4.305e-87 Identity = 125/164 (76.22%), Postives = 138/164 (84.15%), Query Frame = 0 Query: 131 LINPQVWFDIDIGGERAGRITCRLRKDVVPKTAENFRALCTGEKGFGYKNSAFHRVIPGFMCQGGDFTSGDGRGGKSIYGAKFDDENFELTHDGPGILSMANAGPNTNGSQFFLCTVETPWLDGKHVVFGQVTEGLDILKKIEAVGSQVGKTSVPVMIADCGQL 294 + NP+V+FD+ IGG AGRI LR DV PKTAENFRALCTGEKGFGYK S+FHRVIP FMCQGGDFT+ +G GGKSIYG KF+DENF L H GPGILSMANAGP TNGSQFFLCT ET WLDGKHVVFG V EG+D+++KIEA GSQ GKTS V+IADCGQL Sbjct: 1 MSNPRVFFDMTIGGSPAGRIVMELRADVAPKTAENFRALCTGEKGFGYKGSSFHRVIPQFMCQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGILSMANAGPGTNGSQFFLCTAETAWLDGKHVVFGTVVEGMDVVQKIEAKGSQSGKTSAKVVIADCGQL 164 The following BLAST results are available for this feature:
BLAST of EWM24217.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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