EWM24240.1, cds6396 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM24240.1 vs. NCBI_GenBank
Match: gi|585105631|gb|EWM24240.1| (hypothetical protein Naga_100020g68 [Nannochloropsis gaditana]) HSP 1 Score: 681.404 bits (1757), Expect = 0.000e+0 Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0 Query: 1 MHSSSGWISLPLQLGVILAVTLRGHCHLAGSSNSIQGMRPHSLAFFGNWATQAQASTSSTGTSRSTLATPPPSKLVDKGPSLPKLYGGWFDNTLVNQASAAINAAVRDGVKTSEVLFPPLPNMEEREFGTELNMNYNKAVAARLKGPDNILRRQSVAYANVDIASRVAGKTGKRTLILTYDGAVDPNIIKISSKAMLTRINALDVEAASRANDIIFALSPGTGSQWSKASGLKTDAPVVAINAPFSLNYDIAQGGKWEPIYVVKRVTKGWVFRAYPHEFKVYLDTPDGSVELIKEFRGGVVPKLREVSSIVREESQRRGYAALNDRYLTQRL 332 MHSSSGWISLPLQLGVILAVTLRGHCHLAGSSNSIQGMRPHSLAFFGNWATQAQASTSSTGTSRSTLATPPPSKLVDKGPSLPKLYGGWFDNTLVNQASAAINAAVRDGVKTSEVLFPPLPNMEEREFGTELNMNYNKAVAARLKGPDNILRRQSVAYANVDIASRVAGKTGKRTLILTYDGAVDPNIIKISSKAMLTRINALDVEAASRANDIIFALSPGTGSQWSKASGLKTDAPVVAINAPFSLNYDIAQGGKWEPIYVVKRVTKGWVFRAYPHEFKVYLDTPDGSVELIKEFRGGVVPKLREVSSIVREESQRRGYAALNDRYLTQRL Sbjct: 1 MHSSSGWISLPLQLGVILAVTLRGHCHLAGSSNSIQGMRPHSLAFFGNWATQAQASTSSTGTSRSTLATPPPSKLVDKGPSLPKLYGGWFDNTLVNQASAAINAAVRDGVKTSEVLFPPLPNMEEREFGTELNMNYNKAVAARLKGPDNILRRQSVAYANVDIASRVAGKTGKRTLILTYDGAVDPNIIKISSKAMLTRINALDVEAASRANDIIFALSPGTGSQWSKASGLKTDAPVVAINAPFSLNYDIAQGGKWEPIYVVKRVTKGWVFRAYPHEFKVYLDTPDGSVELIKEFRGGVVPKLREVSSIVREESQRRGYAALNDRYLTQRL 332
BLAST of EWM24240.1 vs. NCBI_GenBank
Match: gi|223999173|ref|XP_002289259.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974467|gb|EED92796.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 177.563 bits (449), Expect = 4.724e-50 Identity = 104/275 (37.82%), Postives = 163/275 (59.27%), Query Frame = 0 Query: 75 LVDKGPSLPKLYGGWFDNTLVNQASAAINAAVRDGVKTSEVLFPPLPNMEEREFGTELNMNYNKAVAAR---LKG---PDNILRRQSVAYANVDIASRVAGKT------GKRTLILTYDGAVDPNIIKISSKAMLTRINALDVEAA---SRANDIIFALSPGTGSQWSK--ASGLKTDAPVVAINAPFSLNYDIAQGGKWEPIYVVKRVTKGWVFRAYPHEFKVYLDTPDGSVELIKEFRGGVVPKLREVSSIVREESQRRGYAALNDRYLTQRL 332 L+D G +PK+Y WF++ + QA+AAI+ AV G + EV FPP+PN++E +FGT LN + ++ AR KG P + L R + YAN+ A R+AG GK +LT + AVD + +I + LTR + + A R+N+ + ++PG W + ++ + + P+V +N +S YD+ +E +Y +KR++KGWVFR++P +++ YL+ PDG+VEL+K ++ P LREVS +V E S +R YA NDRY+ RL Sbjct: 25 LIDGGKGMPKIYDAWFNDQITKQANAAISRAVASGKRIMEVQFPPVPNVDEVKFGTPLNQKFGQSQLARDLKCKGGYKPGSKLSRNLLPYANIYWAKRIAGAVKGGALGGKPVGVLTAE-AVDFD--EIGNLGDLTRTGKIFTDKARKEGRSNEAMICINPGGEETWERLVSAHGQPNCPLVVLNNSYSTTYDLGNKKNFEEVYYLKRISKGWVFRSFPGDWEAYLEKPDGNVELLKSYK--TKPSLREVSELVGETSFQR-YAMFNDRYMGGRL 293
BLAST of EWM24240.1 vs. NCBI_GenBank
Match: gi|219128063|ref|XP_002184242.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217404473|gb|EEC44420.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 174.096 bits (440), Expect = 1.074e-48 Identity = 102/273 (37.36%), Postives = 158/273 (57.88%), Query Frame = 0 Query: 75 LVDKGPSLPKLYGGWFDNTLVNQASAAINAAVRDGVKTSEVLFPPLPNMEEREFGTELNMNYNKAVAARLKG------PDNILRRQSVAYANVDIASRVAGKT------GKRTLILTYDGAVDPNIIKISSKAMLTRINALDVEAASR-ANDIIFALSPGTGSQWSKASGLKT--DAPVVAINAPFSLNYDIAQGGKWEPIYVVKRVTKGWVFRAYPHEFKVYLDTPDGSVELIKEFRGGVVPKLREVSSIVREESQRRGYAALNDRYLTQRL 332 LVD G ++P LY GW ++ + QAS A+ A+ GVK EV FPP+PN+EE +FGT LN + V AR G P + + RQ +AY+N+ A ++A G + +LT + AV+ +I+ S + R +L A+ N+ + ++PG QW + + D P V +N +S YD+ +E Y +KR++KGWVFRA+P ++ YL+ PDG+VEL+ ++ + P L+EV++ VREES +R YA NDR+++ RL Sbjct: 26 LVDGGKNMPALYNGWMNDQIAKQASTAVGKAIASGVKQIEVNFPPVPNVEEAKFGTPLNQLFGTKVVAREIGFTGGYKPGSDVSRQLIAYSNMYWAKKIAPAIGGGIMGGSKVTVLTAE-AVNLKLIQNSG---VGRTASLSPRASQEFQNEAVIVVNPGGEEQWERIRAVHASDDIPFVILNNAYSTTYDLGNKRGYEEAYFLKRISKGWVFRAFPGPWQAYLEKPDGNVELLASYK--IKPSLKEVATAVREESFKR-YAMGNDRWMSGRL 291
BLAST of EWM24240.1 vs. NCBI_GenBank
Match: gi|1210516909|dbj|GAX24398.1| (hypothetical protein FisN_4Lh533 [Fistulifera solaris]) HSP 1 Score: 158.303 bits (399), Expect = 1.388e-42 Identity = 98/275 (35.64%), Postives = 151/275 (54.91%), Query Frame = 0 Query: 75 LVDKGPSLPKLYGGWFDNTLVNQASAAINAAVRDGVKTSEVLFPPLPNMEEREFGTELNMNYNKAVAAR-LK-----GPDNILRRQSVAYANVDIASRVA-----GKTGKRTLILTYDGAVDPNIIKISSKAMLTRINALDVEAA--SRANDIIFALSPGTGSQWSK-ASGLKTDAPVVAINAPFSLNYDIAQGGKWEPIYVVKRVTKGWVFRAYPHEFKVYLDTPDGSVELIKEFRGGVVPKLREVSSIVREESQRRGYAALNDRYL---TQRL 332 L+D G +PK Y WFD+ +V QAS A+ A+ G K EV FP +PN+EE +FGT LN + V AR LK P + + R +AY+NV A ++A G G R + + V N+ +I S+ +++I +L + + + A++PG W + S +P+V +N +S Y + +E Y VKR++KGW+FR +P +K YL+ PDGS EL++ + P+L V+++VR+ES +R YA NDR+ QRL Sbjct: 20 LIDGGTDIPKFYKSWFDDQIVKQASTAVEKAIAAGNKKIEVNFPAVPNVEEAKFGTSLNQKFGTTVVARELKIAGGYTPGSDIARNLIAYSNVYWAKKIAPAVGGGLLGGRPVTVVTPEQV--NMKQIQSRGAMSQILSLKMSKGVEVKQGGALIAINPGGEETWDRIQSAFGNGSPMVVLNNAYSTTYGLGNKRGYEEAYFVKRISKGWIFRCFPGPWKAYLEKPDGSCELLETYSSK--PELNVVATLVRDESFKR-YAINNDRWFPGQGQRL 289
BLAST of EWM24240.1 vs. NCBI_GenBank
Match: gi|1072225180|gb|OEU09928.1| (hypothetical protein FRACYDRAFT_248179 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 158.303 bits (399), Expect = 2.841e-42 Identity = 96/280 (34.29%), Postives = 153/280 (54.64%), Query Frame = 0 Query: 75 LVDKGPSLPKLYGGWFDNTLVNQASAAINAAVRDGVKTSEVLFPPLPNMEEREFGTELNMNYNKAVAAR---LKG---PDNILRRQSVAYANVDIASRVAGKTG--------KRTLILTYDGAVDPNIIKISSKAMLTRINALDVEAAS-----RANDIIFALSPGTGSQWSKASGLKT---DAPVVAINAPFSLNYDIAQGGKWEPIYVVKRVTKGWVFRAYPHEFKVYLDTPDGSVELIKEFRGGVVPKLREVSSIVREESQRRGYAALNDRYLTQRL 332 +D G +PKLY G+FD+ + QA+ A+ AA+ G K EV P +PN+EE +FGT LN ++K + + +KG P + + RQ ++YAN+ A +++G K +L+ + +D +IK +K + +I + S +D ++PG W + T + P V +N +S Y + K+E Y +KR+TKGW++RAYP +K YL+ PDGS EL+K F P+LR + +VREES +R YA NDR+++ R+ Sbjct: 45 FLDGGKDIPKLYNGYFDSQIAKQAATAVGAAISSGKKNIEVNLPAVPNLEEVKFGTPLNQKFSKTIVTKDLKVKGGYYPGSDIARQQLSYANMYWAKQISGAVSGGIGGIGGKSVTVLSAE-PLDYELIK--NKGGMNKIGPIRTGLGSGNKKDTLSDACIVINPGGEETWDRLRQSLTKNKNCPFVVLNNAYSTTYGLGNKRKYEEAYYLKRITKGWIYRAYPGPWKAYLEAPDGSTELLKTFN--TKPELRVAAELVREESFKR-YAISNDRWMSGRM 318
BLAST of EWM24240.1 vs. NCBI_GenBank
Match: gi|1210515020|dbj|GAX25983.1| (hypothetical protein FisN_4Hh533 [Fistulifera solaris]) HSP 1 Score: 155.606 bits (392), Expect = 1.439e-41 Identity = 98/275 (35.64%), Postives = 149/275 (54.18%), Query Frame = 0 Query: 75 LVDKGPSLPKLYGGWFDNTLVNQASAAINAAVRDGVKTSEVLFPPLPNMEEREFGTELNMNYNKAVAAR-LK-----GPDNILRRQSVAYANVDIASRVA-----GKTGKRTLILTYDGAVDPNIIKISSKAMLTRINALDVEAA--SRANDIIFALSPGTGSQWSK-ASGLKTDAPVVAINAPFSLNYDIAQGGKWEPIYVVKRVTKGWVFRAYPHEFKVYLDTPDGSVELIKEFRGGVVPKLREVSSIVREESQRRGYAALNDRYL---TQRL 332 L+D G +P Y WFD+ +V QAS A+ A+ G K EV FP +PN+EE +FGT LN + V AR LK P + + R +AY+NV A ++A G G R + + V NI +I S+ +++I +L + + + A++PG W + S +P+V +N +S Y + +E Y VKR++KGW+FR +P +K YL+ PDGS EL++ + P+L V++ VR+ES +R YA NDR+ QRL Sbjct: 20 LIDGGTDIPTFYKSWFDDQIVKQASTAVEKAIAAGNKKIEVNFPAVPNVEEAKFGTSLNQKFGTTVVARELKIAGGYTPGSDIARNLIAYSNVYWAKKIAPAVGGGLLGGRPVTVVTPEQV--NIKQIQSRGAMSQILSLKMSKGVEVKQGGALIAINPGGEETWDRIQSAFGNGSPMVVLNNAYSTTYGLGNKRGYEEAYFVKRISKGWIFRCFPGPWKAYLEKPDGSCELLETYS--TKPELNVVATRVRDESFKR-YAINNDRWFPGQGQRL 289
BLAST of EWM24240.1 vs. NCBI_GenBank
Match: gi|298711618|emb|CBJ32675.1| (immunophilin [Ectocarpus siliculosus]) HSP 1 Score: 133.265 bits (334), Expect = 6.994e-33 Identity = 87/263 (33.08%), Postives = 136/263 (51.71%), Query Frame = 0 Query: 79 GPS--LPKLYGGWFDNT--LVNQASAAINAAVRDGVKTSEVLFPPLPNMEEREFGTELNMNYNKAVAARLK----GPDNILRRQSVAYANVDIASRVAGKTGKRTLILTYDG-AVDPNIIKISSKAMLTRINALDVEAASRANDIIFALSPGTGSQWSKASGLKTDAPVVAINAPFSLNYDIAQGGK-WEPIYVVKRVTKGWVFRAYPHEFKVYLDTPDGSVELIKEFRGGVVPKLREVSSIVREESQRRGYAALNDRYLTQR 331 GPS +PKLY GWF T + A +A+R G K E+ F P+PN+EE +FGT N + VA L P + +R V Y+N+ A ++A G + T DG D ++IK KA + + AA + D + ++PG ++W+ + + V+ +NAP S YD+ K E Y +KRV+KG+VFR P ++ L+ P G +E++ ++ P LR V+ +VR ES +R + NDR+ + Sbjct: 51 GPSGVMPKLYEGWFKKTGQIEKDIVAGAKSALRTG-KPVEICFFPVPNLEEVQFGTATNKAFGTEVAKDLGMGEYKPGSTIRTYLVQYSNIYWAKKLADGLGGTCWVATSDGLKKDTSVIKKPGKAKFCSLRKPETFAAMKKGDTVIVVAPGPTAEWASCAQRFKEQKVIFLNAPLSETYDLGGPLKDLEQGYYLKRVSKGYVFRVSPKPWEALLEKPGGGLEILGKYN--EKPLLRNVAKVVRSESMKR-FGMSNDRWTNDK 309
BLAST of EWM24240.1 vs. NCBI_GenBank
Match: gi|676391477|ref|XP_009039016.1| (hypothetical protein AURANDRAFT_65647 [Aureococcus anophagefferens] >gi|323450564|gb|EGB06445.1| hypothetical protein AURANDRAFT_65647 [Aureococcus anophagefferens]) HSP 1 Score: 130.954 bits (328), Expect = 8.902e-32 Identity = 91/282 (32.27%), Postives = 144/282 (51.06%), Query Frame = 0 Query: 80 PSLPKLYGGWFDNTLVNQASAAINAAVRDGVKTSEVLFPPLPNMEEREFGTELNMNYNKAVAARL---KGPDN-------------------ILRRQSVAYANVDIASRVAGKTG--KRTLILTYDGAVDPN-IIKISSKAMLTRINALDVEAASRANDIIFALSPGTGSQWSKAS--GLKTDAPVVAINAPFSLNYDIAQGGKW---EPIYVVKRVTKGWVFRAYPHEFKVYLDTPDGSVELIKEFRGGVVPKLREVSSIVREESQRRGYAALNDRYLTQR 331 PS PK+Y WF + + A + A +R G++ EV P+PN+EE +FGT LN + VA L GP +++R V+YANV+ A RVA G ++ +L +G VD + K+ ++ + + DV+ S D + ++PG + W++ G APVV +N+ S Y + GG E +Y +K V+KG+V+RA+P+ ++V+LD PDG+ E +K F P L E+S I R SQ + A N+++ R Sbjct: 58 PSFPKIYESWFGDDMAGAMRAGVGAGLRSGLQFMEVRTQPVPNLEEAKFGTPLNERFQIEVARNLGLSDGPSAYVDDEAARKNVRRFDKNYMLVKRDPVSYANVEWARRVAPAFGSKRKIWVLLAEGRVDTSGCAKLPKNFVVKPLESPDVDVQS--GDAVIVVAPGVTASWTRGYDIGAAAGAPVVFLNSQLSEKYQL--GGPLADVEEVYYLKPVSKGFVYRAWPNPWEVWLDKPDGTQERLKVF-SDERPTLGELSQITRSASQSKYGAIFNEKFTNDR 334
BLAST of EWM24240.1 vs. NCBI_GenBank
Match: gi|546314037|ref|XP_005715468.1| (unnamed protein product [Chondrus crispus] >gi|507111946|emb|CDF35649.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 128.257 bits (321), Expect = 1.867e-30 Identity = 86/267 (32.21%), Postives = 137/267 (51.31%), Query Frame = 0 Query: 81 SLPKLYGGWF--DNTLVNQASAAINAAVRDGVKTSEVLFPPLPNMEEREFGTELNMNYNKAVAARL----KGPDNILRRQSVAYANVDIASRVAGKTGKRTLILTYDGAVDPNIIKISSKAMLTRINALDVEAASRA-----NDIIFALSPGTGSQWSKASGL---KTDAPVVAINAPFSLNYDIA--QGGKW---EPIYVVKRVTKGWVFRAYPHEFKVYLDTPDGSVELIKEFRGGVVPKLREVSSIVREESQRRGYAALNDRYL 328 S+PKLY WF D+ L +QA A++ A GV+ E+ +P +PN+EE E GT+LN + K V+ L + +++R + N+ A R+A R + D + K ++ L + V + +D++ L P S W K + L + VV +N+ F+ Y + + G EP+Y +KRVT+G+VFR++P + YL+ PD SVE++ EF +PKL E++ +VRE S R NDRY+ Sbjct: 95 SMPKLYDAWFEPDHELASQACCAVDRAYSSGVRKMELQWPTVPNLEEIEAGTKLNFEFGKQVSRNLGMATQSDYPLIKRYLAQFCNLYWAKRIASCESFRDRTVWALSCDD--VSKNRAEGYLENVRPGSVRNPPKKGEIGKDDVVMILDPRDTSAWVKGAKLLPQGGEGVVVFLNSQFNETYGLTGPRNGVLKGTEPVYFLKRVTRGYVFRSFPEPWLAYLEKPDMSVEVVGEFEK--LPKLSEIAKVVREVSNNRYGGFYNDRYV 357
BLAST of EWM24240.1 vs. NCBI_GenBank
Match: gi|551650521|ref|XP_005828043.1| (hypothetical protein GUITHDRAFT_48967, partial [Guillardia theta CCMP2712] >gi|428172152|gb|EKX41063.1| hypothetical protein GUITHDRAFT_48967, partial [Guillardia theta CCMP2712]) HSP 1 Score: 119.783 bits (299), Expect = 2.040e-28 Identity = 81/253 (32.02%), Postives = 129/253 (50.99%), Query Frame = 0 Query: 82 LPKLYGGWF-DNTLVNQASAAINAAVRDGVKTSEVLFPPLPNMEEREFGTELNMNYNKAVAARLKGPDNI----LRRQSVAYANVDIASRVAGKTGKRTLILTY-DGAVDPNIIKISSKAMLTRINALDVEAASRANDIIFALSPGTGSQWSKA-SGLKTDAPVVAINAPFSLNYDIAQGGKWEPIYVVKRVTKGWVFRAYPHEFKVYLDTPDGSVELIKEFRGGVVPKLREVSSIVREESQRRGYAALNDRY 327 +P LY GWF + +Q A+ A+ DG+ EV FPP+PN+EE +FGT LN + + L D +RR + +AN+ + +A G + + + Y D N + R+ + R ++ ++PG SQW KA S +P++ +N D + G E +Y +KR++KGWVFR YP ++ ++ PDG+VE + + P LREVS +VRE S ++ ++ NDRY Sbjct: 1 MPTLYNGWFWTGEVRDQMLKAVGQALADGLTRMEVNFPPVPNLEEVDFGTALNQQFAIEIRDVLGMEDQKYKIEVRRSLIDFANLYWSRALAAVAGGQPVYVQYCDQTSKKNANSPGENVWIGRLETIPRTLTER-QELSIVVNPGDVSQWKKALSYSGPSSPLIFLNRESFAQRDGSTKGV-EQVYYLKRISKGWVFRQYPGPWQALVEKPDGTVECVATYNKR--PLLREVSKVVREYSFQQ-FSIFNDRY 248 The following BLAST results are available for this feature:
BLAST of EWM24240.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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