EWM24258.1, cds6394 (CDS) Nannochloropsis gaditana

Overview
NameEWM24258.1
Unique Namecds6394
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002468.1:455138..455234 +
Alignment locationCM002468.1:455568..457519 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM24258.1
Productmajor facilitator superfamily mfs_1
Orig transcript idgnl|cribi|Naga_100020g70.5391.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002468.1supercontigCM002468.1:455138..455234 +
CM002468.1supercontigCM002468.1:455568..457519 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: INTERPRO
TermDefinition
IPR020846MFS_dom
IPR011701MFS
IPR001958Tet-R_TetA/multi-R_MdtG
Homology
BLAST of EWM24258.1 vs. NCBI_GenBank
Match: gi|585105649|gb|EWM24258.1| (major facilitator superfamily mfs_1 [Nannochloropsis gaditana])

HSP 1 Score: 1385.16 bits (3584), Expect = 0.000e+0
Identity = 682/682 (100.00%), Postives = 682/682 (100.00%), Query Frame = 0
Query:    1 MNASLRQRPSRRREEGVSPLVAHYVSESASCKDTTSPSQSTVDRKNSNTFGKVDVIEDSPPLLRSPRSHSDGGENVGGTAYLYGGGMKRSRSFLDLINEKIEQEPSTNPDTVSLYLKFIVALDFLAVATVVPLLPQYLARTGCCNEQLAFISSAYSLAQLVGGVLLGWVSDGIMTRKTILMTSLLGSAAAYGMVGASSSRPLLILSRIVVGLVKQTMTMTTALISDLPLDRSRRTKHMSHLTAAVTVSWILGPALGGYLFWLSPRLPPLVAAFIFTLAALVCLIGVPNHPDRGPPGYSPLSTSISSPDLLGMIGQGNGSQYKPKSKSLHAFLFTLKNNFREAFNDPTIIRIVSIRLLYSFTIISLMPTNFIGYLEARYGLKSHEVAYLHSYRATLSFLAQTFLVSAVVRHHTFSEEATARVAIVLGVFLKYSEVLNRDRLVFLFLTTPAIVAIFSLFDCSLQGIYTDSIPAGHRGAALGSMSALQSLVKIAAPLYGGEIFQRVGHERRPEIIFFHYIVLATVVWLVFPPGRHRPKRPPLAPSASAGSLSQIVEGKEEGSSGRSKGSSCRTDGKRDSSTNDREGKHLHAQDMSVPTPYANLSSVSVSESAPFRGPAAAAEKAAAAPAVPSAALTDMGNPQAKNREEGSGVIRRGGMTSLPSSERLHPIRGRFDRGSRVRIGQI 682
            MNASLRQRPSRRREEGVSPLVAHYVSESASCKDTTSPSQSTVDRKNSNTFGKVDVIEDSPPLLRSPRSHSDGGENVGGTAYLYGGGMKRSRSFLDLINEKIEQEPSTNPDTVSLYLKFIVALDFLAVATVVPLLPQYLARTGCCNEQLAFISSAYSLAQLVGGVLLGWVSDGIMTRKTILMTSLLGSAAAYGMVGASSSRPLLILSRIVVGLVKQTMTMTTALISDLPLDRSRRTKHMSHLTAAVTVSWILGPALGGYLFWLSPRLPPLVAAFIFTLAALVCLIGVPNHPDRGPPGYSPLSTSISSPDLLGMIGQGNGSQYKPKSKSLHAFLFTLKNNFREAFNDPTIIRIVSIRLLYSFTIISLMPTNFIGYLEARYGLKSHEVAYLHSYRATLSFLAQTFLVSAVVRHHTFSEEATARVAIVLGVFLKYSEVLNRDRLVFLFLTTPAIVAIFSLFDCSLQGIYTDSIPAGHRGAALGSMSALQSLVKIAAPLYGGEIFQRVGHERRPEIIFFHYIVLATVVWLVFPPGRHRPKRPPLAPSASAGSLSQIVEGKEEGSSGRSKGSSCRTDGKRDSSTNDREGKHLHAQDMSVPTPYANLSSVSVSESAPFRGPAAAAEKAAAAPAVPSAALTDMGNPQAKNREEGSGVIRRGGMTSLPSSERLHPIRGRFDRGSRVRIGQI
Sbjct:    1 MNASLRQRPSRRREEGVSPLVAHYVSESASCKDTTSPSQSTVDRKNSNTFGKVDVIEDSPPLLRSPRSHSDGGENVGGTAYLYGGGMKRSRSFLDLINEKIEQEPSTNPDTVSLYLKFIVALDFLAVATVVPLLPQYLARTGCCNEQLAFISSAYSLAQLVGGVLLGWVSDGIMTRKTILMTSLLGSAAAYGMVGASSSRPLLILSRIVVGLVKQTMTMTTALISDLPLDRSRRTKHMSHLTAAVTVSWILGPALGGYLFWLSPRLPPLVAAFIFTLAALVCLIGVPNHPDRGPPGYSPLSTSISSPDLLGMIGQGNGSQYKPKSKSLHAFLFTLKNNFREAFNDPTIIRIVSIRLLYSFTIISLMPTNFIGYLEARYGLKSHEVAYLHSYRATLSFLAQTFLVSAVVRHHTFSEEATARVAIVLGVFLKYSEVLNRDRLVFLFLTTPAIVAIFSLFDCSLQGIYTDSIPAGHRGAALGSMSALQSLVKIAAPLYGGEIFQRVGHERRPEIIFFHYIVLATVVWLVFPPGRHRPKRPPLAPSASAGSLSQIVEGKEEGSSGRSKGSSCRTDGKRDSSTNDREGKHLHAQDMSVPTPYANLSSVSVSESAPFRGPAAAAEKAAAAPAVPSAALTDMGNPQAKNREEGSGVIRRGGMTSLPSSERLHPIRGRFDRGSRVRIGQI 682          
BLAST of EWM24258.1 vs. NCBI_GenBank
Match: gi|299473117|emb|CBN78693.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 187.193 bits (474), Expect = 4.064e-48
Identity = 151/462 (32.68%), Postives = 236/462 (51.08%), Query Frame = 0
Query:  101 IEQEPSTNPDTVSL-----YLKFIVALDFLAVATVVPLLPQYLARTGCCNEQLAFISSAYSLAQLVGGVLLGWVSDGIMTRKTILMTSLLGSAAAYGMVGASSSRPLLILSRIVVGLVKQTMTMTTALISDLPLDRSRRTKHMSHLTAAVTVSWILGPALGGYLFWLSPRLPPLVAAFIFTLAALVCLIGVPNHPDRGPPGYSPLST--------------------SISSPDLLGMIGQGNGSQYKPKSKSLHAFLFTLKNNFREAFNDPTIIRIVSIRLLYSFTIISLMPTNFIGYLEARYGLKSHEVAYLHSYRATLSFLAQTFLVSAVVRHHTFSEEATARVAIVLGVFLKYSEVLNRDRLV----FLFLTTPAIVAIFSLFDCSLQGIYTDSIPAGHRGAALGSMSALQSLVKIAAPLYGGEIFQRVGHERRPEIIFFHYIVLATVVWLVFPPGRHR 533
            +  E S  P ++S       +K ++ +D L+V  VVPLL  Y        EQ   + SAYSL+Q+VGG++LG +SD  ++R+T+L+ S LGSA +YG +G SSS  +L++ R+VVGLVKQT+T++TA++S+    +  R+  +S L AA+T + I+G A G  L+      PPLVA  +F L A + LI +P+   R   G++  +                     + ++P L G  G G  ++    S S  +       NF++A      +RI++ +L++ F   +L   NF+GY E R+G+ S  + Y+ SY A LSF  Q ++V    R  + + E T  VA+ L V    +       ++    +L L  PA           LQ ++T  +P G  GAALG ++ L S   + AP YGG++   +G   RP +   HY     V+W V    R R
Sbjct:   23 VGMEGSRKPSSLSAIHITDVVKVLLFVDMLSVDLVVPLLSSYFRDLNISTEQYGLMFSAYSLSQIVGGLVLGALSDRALSRRTVLLISFLGSALSYGTIGLSSSLTMLLVGRVVVGLVKQTVTISTAIVSE-HTAKEERSAEISKLGAAMTFASIVGSACGSLLYQKRKTFPPLVACALFLLNAALALILLPSGNGREVGGWTDAAAGAKKKDDDIVNGSDNKDDTLTTATPALDG--GVGKSAERGEDSSSFSSATRRFLANFKKACRSGPTLRILAAKLIFGFLFRALGSQNFVGYYEERFGVASASLGYMSSYTAGLSFFVQLYVVG---RLASLASE-THLVAMSLAVVALMNLAEGAPSIIGFWGYLALLIPARTVAHGTLQACLQSMFTQRVPQGDLGAALGVLNVLSSASGVVAPAYGGKLIGYLGILARPTVNAAHYAAF-FVLWWVMEVARGR 476          
BLAST of EWM24258.1 vs. NCBI_GenBank
Match: gi|1210529092|dbj|GAX12238.1| (hypothetical protein FisN_1Hh168 [Fistulifera solaris])

HSP 1 Score: 161.77 bits (408), Expect = 2.765e-39
Identity = 124/416 (29.81%), Postives = 204/416 (49.04%), Query Frame = 0
Query:   91 RSFLDLINEKIEQEPSTNPDTVSLYLKFIVALDFLAVATVVPLLPQYLARTGCCNE-QLAFISSAYSLAQLVGGVLLGWVSDG-IMTRKTILMTSLLGSAAAYGMVGASSSRPLLILSRIVVGLVKQTMTMTTALISDLPLDRSRRTKHMSHLTAAVTVSWILGPALGGYLF-WLSPRLPPLVAAFIFTLAALVCLIGVPNHPDRGPPGYSPLSTSISSPDLLGMIGQGNGSQYKPKSKSLHAFLFTLKNNFREAFNDPTIIRIVSIRLLYSFTIISLMPTNFIGYLEARYGLKSHEVAYLHSYRATLSFLAQTFLVSAVVRHHTFSEEATARVAIVLGVFLKYSEVLNRDRLVFLFLT--TPAIVAIFSLFDCSLQGIYTDSIPAGHRGAALGSMSALQSLVKIAAPLYGGEIFQ 501
            R F+ L++     E  + P T+ L    +V +D  AV+ VVPLL QY    G  N  Q   +SS +S +Q+VGG+L+G V+D   + RK++L  S  GSA +Y ++ A      L+ SR++VGLVKQTMT+TTA+++     R+ R  +M  L+AA TV+WI+GP++G  L+ ++ PR P L+A  +F    L+    +P   +  PP     S  I                             T+    +  F   T+  +V  RL++++   +   +    + E  YGL+ H+  Y+ SY+  L FL Q+ +V+AV+R      +            L ++ +L   + + LFLT   P +   F +   SLQ + T  +P     + L ++  LQ+ V ++ P Y   +F+
Sbjct:   56 RKFVHLLSHLRSIERVSPPTTLLL----LVLIDMFAVSLVVPLLFQYYKSAGVNNAGQRELLSSLFSTSQIVGGLLMGLVTDARCVRRKSLLFLSFAGSALSYALI-AFGGFTALVCSRVLVGLVKQTMTVTTAMLTSWT-SRTTRAHYMGRLSAASTVAWIVGPSVGAMLYRYVDPRAPALLACVLFVTNILLAAKCLPTDEESDPPDVDSPSQRI-----------------------------TVLQKLKSCFTSQTLGTVVLARLIFTWVAKATNYSQLGNFYEDMYGLEPHQRGYISSYQQFLQFLVQSTMVTAVMRWSGGERQTIC----FFTALLAFTFLLESFQSLPLFLTVLCPVMSLCFGMTQLSLQSLLTHVVPLHSVFSVLAALDVLQNAVSVSVPFYRTFLFR 432          
BLAST of EWM24258.1 vs. NCBI_GenBank
Match: gi|1210519903|dbj|GAX21332.1| (hypothetical protein FisN_1Lh168 [Fistulifera solaris])

HSP 1 Score: 158.688 bits (400), Expect = 4.229e-38
Identity = 113/385 (29.35%), Postives = 193/385 (50.13%), Query Frame = 0
Query:  122 LDFLAVATVVPLLPQYLARTGCCNE-QLAFISSAYSLAQLVGGVLLGWVSDG-IMTRKTILMTSLLGSAAAYGMVGASSSRPLLILSRIVVGLVKQTMTMTTALISDLPLDRSRRTKHMSHLTAAVTVSWILGPALGGYLF-WLSPRLPPLVAAFIFTLAALVCLIGVPNHPDRGPPGYSPLSTSISSPDLLGMIGQGNGSQYKPKSKSLHAFLFTLKNNFREAFNDPTIIRIVSIRLLYSFTIISLMPTNFIGYLEARYGLKSHEVAYLHSYRATLSFLAQTFLVSAVVRHHTFSEEATARVAIVLGVFLKYSEVLNRDRLVFLFLT--TPAIVAIFSLFDCSLQGIYTDSIPAGHRGAALGSMSALQSLVKIAAPLYGGEIFQ 501
            +D  AV+ VVPLL QY    G  N  Q   +SS +S +Q+VGG+L+G+++D   + RK++L  S +GSA +Y ++ A      L+ SR++VGLVKQTMT+TTA+++     R+ R  +M  L+AA TV+WI+GP++G  L+ ++ PR P  +A  +F    L+    +P   +                  L  +G G+ SQ +           T+    +  F    +  +V  RL++++   +   +    + E  YGL+ H+  Y+ SY+  L FL Q+ LV+ ++R      +            L ++ +L   + + LFLT   P +   F +   SLQ + T  +P     + L ++  LQ+ V ++ P Y   +F+
Sbjct:   88 IDTFAVSLVVPLLFQYYKSAGVNNAGQRELLSSLFSTSQIVGGLLMGFITDAKWVRRKSLLFISFIGSALSYALI-AYGGFTALVCSRVLVGLVKQTMTVTTAMLTSCT-SRTTRAHYMGRLSAASTVAWIVGPSVGAMLYRYVDPRAPAWLACVLFVGNILLAAKSLPTQEE---------------SHFLQDVGTGSPSQGQR---------ITMLQKLKSCFTSQNLGSVVLARLIFTWVAKATNYSQLGNFYEDMYGLEPHQRGYISSYQQFLQFLVQSTLVTTIMRWSGGERQTIC----FFTALLAFTFLLESFQSLPLFLTVLCPVMSLCFGMTQLSLQSLLTHVVPLHSMFSVLAALDVLQNAVSVSVPFYRTFLFR 442          
BLAST of EWM24258.1 vs. NCBI_GenBank
Match: gi|224006047|ref|XP_002291984.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220972503|gb|EED90835.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 153.68 bits (387), Expect = 1.709e-36
Identity = 126/456 (27.63%), Postives = 215/456 (47.15%), Query Frame = 0
Query:  101 IEQEPSTNPDTVS--LYLKFIVALDFLAVATVVPLLPQYLARTGCCN-EQLAFISSAYSLAQLVGGVLLGWVSD-GIMTRKTILMTSLLGSAAAYGMV-GASSSRPLLILSRIVVGLVKQTMTMTTALISDLPLDR---SRRTKHMSHLTAAVTVSWILGPALGGYLFWLSPRLPPLVAAF-IFTLAALVCLIGVPNHPDRGPPGYSPLSTSISSPDLLGMIGQGNGSQYKPKSKSLHAFLFTLKNNFREAFNDPTIIRIVSIRLLYSFTIISLMPTNFIGYLEARYGLKSHEVAYLHSYRATLSFLAQTFLVSAVVRHHTFSEEATARVAIVLGVFLKYSEVLNRDRLVFLFLTTPAIVAIFSLFDCSLQGIYTDSIPAGHRGAALGSMSALQSLVKIAAPLYGGEIFQ---RVGHER----------RPEIIFF----HYIVLATVV-WLVFPP 529
            +++EP+T    +S    L  +V +D  +V+ VVPLL  Y    G  +  Q   +SS +S +Q++GG+L+G +SD G ++R+ IL+ S LGSA +Y ++ G    R  LI SR++VGLVKQTMT+++AL++    +    + R   M  L A+ TV+WILGP+ G  L+       P  AA  +F L +++  + +P   D              +  +   I   N S+   K +           N +  F+  T+  +V+  LLY +   +    N   + E +YG++ +   Y+ SY+  L+F+ Q+FLV  ++       +A    +  L       E+    +L F  L  P +    ++   SL+ + T   P    G+ L ++  LQ+   +  P Y   +F+   RVG E            P++  F    H++    V+ WL+  P
Sbjct:   46 MKREPTTRQSLISPPATLCVLVMIDMFSVSLVVPLLHTYYKSAGVHSANQREMLSSLFSTSQILGGLLIGALSDIGFLSRRHILLVSFLGSALSYALIIGGGIQR--LICSRVIVGLVKQTMTVSSALLAQYTSNSDATNDRAVWMGRLGASTTVAWILGPSFGSVLYQRVGEFAPAGAACGLFLLNSVLAAVLLPTEEDAKE----------DAGAIKKDIKHSNASERGGKGR--------FYTNLKTCFSSSTLASVVTSLLLYGWVCRTTSYANMASFYEEKYGIEPYTRGYIKSYQQCLNFVVQSFLVRWLLSFFGGERKAACIASFALAA-ATLCEIHASFQL-FTILVCPIVAVSIAMISVSLRSLLTQVTPKESLGSVLAALDVLQNAASVTVPFYRTFLFELVTRVGSEEDVNADMKGDPSPKLWLFSSFIHWVGFTVVLCWLLVLP 479          
BLAST of EWM24258.1 vs. NCBI_GenBank
Match: gi|1072230746|gb|OEU15479.1| (MFS general substrate transporter [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 146.362 bits (368), Expect = 3.795e-34
Identity = 126/448 (28.12%), Postives = 216/448 (48.21%), Query Frame = 0
Query:  116 LKFIVALDFLAVATVVPLLPQYLARTGCCN-EQLAFISSAYSLAQLVGGVLLGWVSDG-IMTRKTILMTSLLGSAAAYGMVGASSSRPLLILSRIVVGLVKQTMTMTTALIS--DLPLDRSRRTKHMSHLTAAVTVSWILGPALGGYLF-WLSPRLPPLVAAFIFTLAALVCLI----GVPNHPDRGPPGYSPLSTSISSPDLLGMIGQGNGSQYKPKSKSLHAFLFTLKNNFREAFNDPTIIRIVSIRLLYSFTIISLMPTNFIGYLEARYGLKSHEVAYLHSYRATLSFLAQTFLVSAVVRHHTFSEEATARVAIVL--GVFLKYSEVLNRDRLVFLFLTTPAIVAIFSLFDCSLQGIYTDSIPAGHRGAALGSMSALQSLVKIAAPLYGGEIFQRVGHER----------RPEII------FFHYIVLATVVWLVFPPGRHRPKR 536
            L  +V +D  +VA V+PLL QY  + G  +  Q   +SS +S +Q++GG+LLG+++D   + +KT+L  S  GSA AY M+ A      LILSRI+VGLVKQTMT+TT++++    P  RSR   +M  L ++ T +WILGP+ G  LF ++    P  VA+F+F L  ++  +     + N+    P        S SS D        N S  K + +           N +  ++  ++  ++   LL+S+   +   ++   Y E  YG++ H   Y+ SY+  L F+ Q+ L+ +V+        A      +L  G FL+  + L     VFL   +P+I    ++   SL+ + T   P     +   ++  LQ+   ++ P Y   +F+ +  E            P+ +       FH+++ A V+  +  PG++   +
Sbjct:   16 LPILVFIDNFSVALVIPLLFQYYKKAGVTSATQRELLSSVFSASQIIGGLLLGYLTDAKFLRKKTVLFLSFGGSAIAYLMI-AYGGFTALILSRILVGLVKQTMTVTTSMLTVCTAPEIRSR---NMGRLQSSSTAAWILGPSAGALLFKYIDHMAPVYVASFLFVLNMILAGVLLSDNIENNACLDPDSGKSKRDSTSSED--EYTYDKNHSN-KGRKRGFW-------ENLKSCYSSESLTSVIVGLLLFSWMYRATSYSSMGSYYEDMYGVEPHIRGYIQSYQRVLQFIVQSSLIQSVLERVGGERRAVFLACALLAGGTFLEARQNL----FVFLLAISPSIALSTTMISVSLRSLLTQLAPEDAIFSIFAALDVLQNATAVSVPFYRAFLFRLMTDENDNTGQTTMIGDPDPVSWVLCSAFHWVIAAIVMAYILRPGQNESLK 445          
BLAST of EWM24258.1 vs. NCBI_GenBank
Match: gi|551668852|ref|XP_005837185.1| (hypothetical protein GUITHDRAFT_135376 [Guillardia theta CCMP2712] >gi|428181341|gb|EKX50205.1| hypothetical protein GUITHDRAFT_135376 [Guillardia theta CCMP2712])

HSP 1 Score: 134.806 bits (338), Expect = 4.471e-31
Identity = 104/321 (32.40%), Postives = 163/321 (50.78%), Query Frame = 0
Query:  114 LYLKFIVALDFLAVATVVPLLPQYLARTGCCNEQLAFISSAYSLAQLVGGVLLGWVSDGIMTRKTILMTSLLGSAAAYGMVGASSSRPL---LILSRIVVGLVKQTMTMTTALISDLPLDRSRRTKHMSHLTAAVTVSWILGPALGGYLF-WLSPRLPPLVAAFIFTLAALVCLIGVPN------HPDRGPPGYSPLSTSISSPDLLGMIGQGNGSQYKPKSKSLHAFLFTLKNNFREAFNDPTIIRIVSIRLLYSFTIISLMPTNFIGYLEARYGLKSHEVAYLHSYRATLSFLAQTFLVSAVVRHHTFSEEATARVAIV 424
            L LK  V LD + V   VPLLP Y    G   E L  ++S Y ++Q+V GV+LG+VSD +  RK IL+ S LGSA +Y + G S    L   L+LSR +VGLVKQTMT++ A+ + L  D   RT+ +SHL A  T+++++GP +GG L    +  +P   AA +F L AL+  I +PN      HP +     +             ++   +    +     L           +E     T+I+ ++   + +  + S        Y+  +Y L+ H + YL SY++ +S  +QT+LV+A+ +   F EE T + A +
Sbjct:   22 LVLKLAVFLDMVGVGLYVPLLPFYWRELGVKTELLGLVASVYQISQIVSGVVLGYVSDHMSGRKNILLLSFLGSAVSYALAGLSYQNSLISTLVLSRFIVGLVKQTMTISRAITTSLTTDED-RTRSLSHLRACATLAFLVGPTMGGLLSKTFNKAVPAYAAAALFVLNALMVQIVLPNDISSHAHPAKEKKEETEEEEKKEEEKRKTLVRSNSTGAVQGIRDLLE----------KEGLGSLTLIKFLNSVFVAACHVFS------SKYVTEKYELEPHHMGYLSSYQSLVSLASQTYLVAAISKR--FGEERTLQAAFL 323          
BLAST of EWM24258.1 vs. NCBI_GenBank
Match: gi|219112133|ref|XP_002177818.1| (tetracycline resistance protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410703|gb|EEC50632.1| tetracycline resistance protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 134.035 bits (336), Expect = 9.606e-30
Identity = 109/385 (28.31%), Postives = 180/385 (46.75%), Query Frame = 0
Query:  126 AVATVVPLLPQYLARTGCCN-EQLAFISSAYSLAQLVGGVLLGWVSDG-IMTRKTILMTSLLGSAAAYGMVGASSSRPLLILSRIVVGLVKQTMTMTTALISDLPLDRSRRTKHMSHLTAAVTVSWILGPALGGYLF-WLSPRLPPLVAAFIFT---LAALVCLIG---VPNHPDRGPPGYSPLSTSISSPDLLGMIGQGNGSQYKPKSKSLHAFLFTLKNNFREAFNDPTIIRIVSIRLLYSFTIISLMPTNFIGYLEARYGLKSHEVAYLHSYRATLSFLAQTFLVSAVVRHHTFSEEATARVAIVLGVFLKYSEVLNRDRLVFLFLTTPAIVAIFSLFDCSLQGIYTDSIPAGHRGAALGSMSALQSLVKIAAPLYGGEIFQ 501
            AV+ VVPLL QY    G     +   +S+ +S +Q++GG+L+G ++D  ++ RK+IL  S  GSA +Y ++      P LI SR++VGLVK TMT+ T ++S+    +  R KHM  LTA+ T +WI+GP++G   + ++  R P L A  IF    + A V L G     +HP    P      T++   +    +G GN                T+ N  +  F    +  +V  +L+ ++   +   +    + E  Y L S+   Y+ S++  L F AQ  LV  V++        T     VL V + +          FL    P +    ++   SLQ + T   P+    + L ++  LQ+ V ++ P Y   +F+
Sbjct:   75 AVSLVVPLLFQYYQTAGVTRAHERELLSALFSASQIIGGLLVGALTDAKLVRRKSILFLSFGGSALSYALI-VYGGLPALIFSRVLVGLVKHTMTVATTMLSNCT-TKDTRAKHMGRLTASSTAAWIVGPSIGALAYQYVDERAPALFACAIFATNMVLAAVLLEGDTFESSHPKNDNPDEQSDHTNVEHDEKKKAVG-GN----------------TIFNRLKSCFTSKALSSVVLTQLVVTWVSKATSFSQLGSFYEDMYDLPSYHRGYISSFQQLLHFAAQATLVGPVMQQLGGERRTTCLCTAVLSVAVLFKA--QGSLWFFLIALCPVLALCSTMIHLSLQTLVTHVAPSESIFSVLAALDVLQNAVSVSVPFYRTILFR 438          
BLAST of EWM24258.1 vs. NCBI_GenBank
Match: gi|1084057613|gb|OGK62569.1| (hypothetical protein A3K47_03175 [Candidatus Roizmanbacteria bacterium RIFOXYA2_FULL_38_14] >gi|1084058814|gb|OGK63768.1| hypothetical protein A3K27_03175 [Candidatus Roizmanbacteria bacterium RIFOXYA1_FULL_37_12] >gi|1084060686|gb|OGK65614.1| hypothetical protein A3K38_03175 [Candidatus Roizmanbacteria bacterium RIFOXYB1_FULL_40_23] >gi|1084062618|gb|OGK67498.1| hypothetical protein A2334_03670 [Candidatus Roizmanbacteria bacterium RIFOXYB2_FULL_38_10] >gi|1084065202|gb|OGK70019.1| hypothetical protein A3K21_03180 [Candidatus Roizmanbacteria bacterium RIFOXYC1_FULL_38_14] >gi|1084066497|gb|OGK71300.1| hypothetical protein A2446_01520 [Candidatus Roizmanbacteria bacterium RIFOXYC2_FULL_38_9] >gi|1084069028|gb|OGK73761.1| hypothetical protein A3K52_03175 [Candidatus Roizmanbacteria bacterium RIFOXYD1_FULL_38_12])

HSP 1 Score: 119.013 bits (297), Expect = 2.618e-25
Identity = 111/408 (27.21%), Postives = 189/408 (46.32%), Query Frame = 0
Query:  108 NPDTVSLYLKFIVALDFLAVATVVPLLPQYLARTGCCNEQLAFISSAYSLAQLVGGVLLGWVSDGIMTRKTILMTSLLGSAAAYGMVGASSSRPLLILSRIVVGLVKQTMTMTTALISDLPLDRSRRTKHMSHLTAAVTVSWILGPALGGYLFWLSPRLPPLVAAFIFTLAALVCLIGVPNHPDRGPPGYSPLSTSISSPDLLGMIGQGNGSQYKPKSKSLHAFLFTLKNNFREAFNDPTIIRIVSIRLLYSFTIISLMPTNFIGYLEARYGLKSHEVAYLHSYRATLSFLAQTFLVSAVVRHHTFSEEATARVAIVLGVFLKYSEVLNRDRLV---------FLFLTTPAIVAIFSLFDCSLQGIYTDSIPAGHRGAALGSMSALQSLVKIAAPLYGGEIFQRVGHE 506
            N   ++++L  IV +D L    ++PLLP    R      Q+ F+S+ YSL QL+   +LG +SD    RK +L+ S LGSA  Y ++G ++S P+L LSRI+ GL    +++  A I+D+   +  R K M  + AA  + +I GPALGG+L       P   A F+ +L  ++C                   T    P+ + ++        K       AF F      ++     TI  ++ +  L + +  S++  NF  + +A++G    E  +  +Y   L+ + Q  L+  +++   F E+            LKYS +     L          FLF+T   IV   S+ + ++Q + +++IP    G  LG + +   L +I  P+ GGE+F R+G +
Sbjct:    3 NKPLLAIFL--IVFVDLLGFGIILPLLPFIAERFSANPAQIGFLSATYSLFQLLAAPVLGRLSDR-FGRKKLLIISQLGSAVGYLLLGWATSLPILFLSRIIDGLTGGNISIAQAYIADVT-TKENRAKGMGMIGAAFGMGFIFGPALGGFLARFGYSYPAYFAVFV-SLVTVLC-------------------TYFFLPETINVV--------KAAHTKRTAFTFV---EMKKILMSETIGYLIIVFFLLN-SAFSILQGNFALWTQAKFGFGPTENGFFFAYIGILAVIFQLQLLPILIKR--FHEKKL----------LKYSCLFLFFGLFLMPLIPIASFLFVTQFLIVLGNSMANPAIQALASENIPKEEYGGTLGFLQSAGGLGRIFGPIIGGEVFFRMGKD 362          
BLAST of EWM24258.1 vs. NCBI_GenBank
Match: gi|676394887|ref|XP_009040721.1| (hypothetical protein AURANDRAFT_67094 [Aureococcus anophagefferens] >gi|323448720|gb|EGB04615.1| hypothetical protein AURANDRAFT_67094 [Aureococcus anophagefferens])

HSP 1 Score: 122.094 bits (305), Expect = 4.754e-25
Identity = 66/141 (46.81%), Postives = 95/141 (67.38%), Query Frame = 0
Query:  120 VALDFLAVATVVPLLPQYLARTGCCNEQLAFISSAYSLAQLVGGVLLGWVSDGIMTRKTILMTSLLGSAAAYGMVGASSSR-PLLILSRIVVGLVKQTMTMTTALISDLPLDRSRRTKHMSHLTAAVTVSWILGPALGGYL 259
            V LD LAV+ VVPLLP      G  ++ L  + S YS+AQ+VGG+ LG +SDG + RK +L+ + +G+ +AY MVG  S+   +L+LSR+VVGL KQTMT +TAL+++L    + R   +  +++A  VSWI G +LGGYL
Sbjct:  465 VLLDLLAVSLVVPLLPARFRELGVSSKALGLVGSTYSVAQIVGGLALGALSDGALGRKGLLLLNFVGAGSAYAMVGWPSAPFEVLVLSRVVVGLCKQTMTASTALMTELTEPGAERALWIGRVSSAAQVSWIAGQSLGGYL 605          
The following BLAST results are available for this feature:
BLAST of EWM24258.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585105649|gb|EWM24258.1|0.000e+0100.00major facilitator superfamily mfs_1 [Nannochlorops... [more]
gi|299473117|emb|CBN78693.1|4.064e-4832.68conserved unknown protein [Ectocarpus siliculosus][more]
gi|1210529092|dbj|GAX12238.1|2.765e-3929.81hypothetical protein FisN_1Hh168 [Fistulifera sola... [more]
gi|1210519903|dbj|GAX21332.1|4.229e-3829.35hypothetical protein FisN_1Lh168 [Fistulifera sola... [more]
gi|224006047|ref|XP_002291984.1|1.709e-3627.63predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1072230746|gb|OEU15479.1|3.795e-3428.13MFS general substrate transporter [Fragilariopsis ... [more]
gi|551668852|ref|XP_005837185.1|4.471e-3132.40hypothetical protein GUITHDRAFT_135376 [Guillardia... [more]
gi|219112133|ref|XP_002177818.1|9.606e-3028.31tetracycline resistance protein [Phaeodactylum tri... [more]
gi|1084057613|gb|OGK62569.1|2.618e-2527.21hypothetical protein A3K47_03175 [Candidatus Roizm... [more]
gi|676394887|ref|XP_009040721.1|4.754e-2546.81hypothetical protein AURANDRAFT_67094 [Aureococcus... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna6410rna6410Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications