EWM24269.1, cds6393 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM24269.1 vs. NCBI_GenBank
Match: gi|585105660|gb|EWM24269.1| (abortive infection protein [Nannochloropsis gaditana]) HSP 1 Score: 844.343 bits (2180), Expect = 0.000e+0 Identity = 418/418 (100.00%), Postives = 418/418 (100.00%), Query Frame = 0 Query: 1 MPRPLAQSMDHGPCATCRASQSRTRNFPLSPLARPALLQVTTVFDMVGRSTVPARILESRGGQRRRRYAGRKTFMCLQLGRLNTFFFGTAVSRLFVSALVYLVFAGSIVQAFLVPRLPCPFHSLSAPLLRDKISAPSSAFVPRLPYAADYTYSMHSSVRWSKPQRSQDDVRYSTKQNVLEDFEQRLRGSNAQSEESPAYVAETPRGKQRIPLPPGPNRLLILFSIIMAAALAALGVTVGQFVDVSPLATLSLQPAMFLLGAVLAMPLFGIDALLQNVQEDTASEVYSLSIFGTTTPVLSVVALAAAVTLATGVGEETLFRGLIQQGIASLAGPWVGLVVGAGVFGLAHKMGPSDVLFISLSGAYMGLVFLQYGDLTVPIATHATYDFLILCGAYFRAKKRMSRSSVNLKEHQGKGRGR 418 MPRPLAQSMDHGPCATCRASQSRTRNFPLSPLARPALLQVTTVFDMVGRSTVPARILESRGGQRRRRYAGRKTFMCLQLGRLNTFFFGTAVSRLFVSALVYLVFAGSIVQAFLVPRLPCPFHSLSAPLLRDKISAPSSAFVPRLPYAADYTYSMHSSVRWSKPQRSQDDVRYSTKQNVLEDFEQRLRGSNAQSEESPAYVAETPRGKQRIPLPPGPNRLLILFSIIMAAALAALGVTVGQFVDVSPLATLSLQPAMFLLGAVLAMPLFGIDALLQNVQEDTASEVYSLSIFGTTTPVLSVVALAAAVTLATGVGEETLFRGLIQQGIASLAGPWVGLVVGAGVFGLAHKMGPSDVLFISLSGAYMGLVFLQYGDLTVPIATHATYDFLILCGAYFRAKKRMSRSSVNLKEHQGKGRGR Sbjct: 1 MPRPLAQSMDHGPCATCRASQSRTRNFPLSPLARPALLQVTTVFDMVGRSTVPARILESRGGQRRRRYAGRKTFMCLQLGRLNTFFFGTAVSRLFVSALVYLVFAGSIVQAFLVPRLPCPFHSLSAPLLRDKISAPSSAFVPRLPYAADYTYSMHSSVRWSKPQRSQDDVRYSTKQNVLEDFEQRLRGSNAQSEESPAYVAETPRGKQRIPLPPGPNRLLILFSIIMAAALAALGVTVGQFVDVSPLATLSLQPAMFLLGAVLAMPLFGIDALLQNVQEDTASEVYSLSIFGTTTPVLSVVALAAAVTLATGVGEETLFRGLIQQGIASLAGPWVGLVVGAGVFGLAHKMGPSDVLFISLSGAYMGLVFLQYGDLTVPIATHATYDFLILCGAYFRAKKRMSRSSVNLKEHQGKGRGR 418
BLAST of EWM24269.1 vs. NCBI_GenBank
Match: gi|1084148180|gb|OGL44283.1| (hypothetical protein A2161_04845 [Candidatus Schekmanbacteria bacterium RBG_13_48_7]) HSP 1 Score: 83.5741 bits (205), Expect = 5.272e-15 Identity = 51/158 (32.28%), Postives = 87/158 (55.06%), Query Frame = 0 Query: 238 VGQFVDVSPLATLSLQPAMFLLGAVLAMPLFGIDALL-----QNVQE--DTASEVYSLSIFGTTTPVLSVVALAAAVTLATGVGEETLFRGLIQQGIASLAGPWVGLVVGAGVFGLAHKMGPSDVLFISLSGAYMGLVFLQYGDLTVPIATHATYDFL 388 +G F++ +PL T++L F+ G + A+PLF I L+ Q++++ + + L + L +V++ A G GEE FRG++Q + +AG GL++ +FG AH + P + + G Y+G +F++ G+L VPI THA YD+L Sbjct: 41 LGYFLNHNPLNTINLSAIDFITGIIAALPLFFIFILMFRLPVQSIKKIIQLLEKFHQLVLNKINNFELIIVSVFA------GAGEEMFFRGMLQISLNGVAGNTGGLILSGILFGFAHFITPVYAIIAACIGVYLGWIFMETGNLLVPIVTHAFYDYL 192
BLAST of EWM24269.1 vs. NCBI_GenBank
Match: gi|505057276|ref|WP_015244378.1| (CPBP family intramembrane metalloprotease [Singulisphaera acidiphila] >gi|430013484|gb|AGA25198.1| putative metal-dependent membrane protease [Singulisphaera acidiphila DSM 18658]) HSP 1 Score: 83.5741 bits (205), Expect = 6.068e-15 Identity = 65/188 (34.57%), Postives = 100/188 (53.19%), Query Frame = 0 Query: 220 LILFSIIMAAALAALGVTVGQFVDVSPLATLSLQPAMFLLGAVLAMPLFGIDALL--------QNVQEDTASEVYSLSIFGTT-TPVLSVVALAAAVTLATGVGEETLFRGLIQQGIASLAGPWVGLVVGAGVFGLAHKMGPSDVLFISLSGAYMGLVFLQYGDLTVPIATHATYDFLILCGAYFRAK 398 +++ +++ LA L + +G + SPL + LG V A+P++ + LL + ++ +E+ L FG+ L++VALAA GVGEE LFRG++Q +A G W GLV + +FGL H + + VL L GAY+G V++ G+L V + HA YDFL L A FR + Sbjct: 20 VVVAAVLFEGGLAPLALAIGWLMGQSPLEGFTWSIRDAFLGVVAALPMYAMFQLLMRWPIRPLERIRHFFEAELTPL--FGSRPDSDLALVALAA------GVGEEMLFRGVLQGVLAHWLGTWEGLVAASLLFGLVHPITVTYVLVAGLLGAYLGAVWIFSGNLLVVMIAHAVYDFLALR-ALFRGR 198
BLAST of EWM24269.1 vs. NCBI_GenBank
Match: gi|299115438|emb|CBN75603.1| (Abortive infection protein [Ectocarpus siliculosus]) HSP 1 Score: 80.4925 bits (197), Expect = 7.224e-13 Identity = 74/247 (29.96%), Postives = 114/247 (46.15%), Query Frame = 0 Query: 185 RLRGSNAQSEESPAYVAETPRGKQRIPLPPGPN----RLLILFSIIMAAALAALGVTVGQFVDVSPLATLSLQPAMFLLGAVLAMPLFGIDALLQNV------QEDTASEVYSLSIFGT--TTPVLSVVALAAAVTLATGVGEETLFRGLIQQGIASLAGPWVGLVVGAGVFGLAHKMGPSDVLFI-SLSGAYMGLVFLQY-GDLTVPIATHATYDFLILCGAYFRAKKRMS---RSSVNLKEHQGK 414 R+ GS S AE P+G + GPN R+L+ + + A A L V+P A A G + A+P+F + LL+ + D +++Y + +FG PV+S+ + A G EE LFRG+IQQG+++L G LV+ + +FGLAH P F + GA GL+++ G+L VPI H YD L + RA ++ R + KE + + Sbjct: 62 RMHGSG-----SVKMAAEKPKGSGMLQ---GPNLELMRILVQGEVAVGTAAAGLAF----LTKVNPFAGTLFSWAALKAGCLGALPIFLVSVLLEKSGVDFFRKIDQDTKLYVVQVFGAKRNWPVVSLWSFVLAAN--AGFFEEVLFRGVIQQGLSTLIGGIPALVISSVLFGLAHSPVPGASSFTEACYGANFGLLYMMSGGNLLVPIIAHVLYDMLTFLEVHQRATAQLETTLRGDLPQKEQEKR 294
BLAST of EWM24269.1 vs. NCBI_GenBank
Match: gi|670486285|ref|WP_031434537.1| (CPBP family intramembrane metalloprotease [Methylomarinum vadi]) HSP 1 Score: 77.411 bits (189), Expect = 7.437e-13 Identity = 55/164 (33.54%), Postives = 77/164 (46.95%), Query Frame = 0 Query: 230 ALAALGVTVGQFVDVSPLATLSLQPAMFLLGAVLAMPLFGIDALLQNVQEDTASEVYSLSIFGTTTPVLSVVALAAAVTLAT--GVGEETLFRGLIQQGIASLAGPWVGLVVGAGVFGLAHKMGPSDVLFISLSGAYMGLVFLQYG---DLTVPIATHATYDFL 388 +L + V +G D+ P L G +PLF I +QN+Q + +V L + T P + A LA G+ EE LFRG++Q I + G GLV +FGL H + P + +L G Y+GL L YG +L P+ HA YDFL Sbjct: 21 SLLVVAVVLGWIADIDPFENLHFSEKAMFYGVAGTLPLFVIFVAMQNLQIEAVQQVRKL-LLETLGPSMHRYGWADLFILAAIAGLSEEVLFRGVVQPWIEAGWGRSAGLVFSNIIFGLVHAVTPLYAILATLVGIYLGLS-LDYGAERNLLTPVIIHAAYDFL 182
BLAST of EWM24269.1 vs. NCBI_GenBank
Match: gi|1123619663|ref|WP_074310252.1| (CPBP family intramembrane metalloprotease [Singulisphaera sp. GP187] >gi|1119035371|emb|SIO45466.1| hypothetical protein SAMN05444166_4867 [Singulisphaera sp. GP187]) HSP 1 Score: 77.411 bits (189), Expect = 7.668e-13 Identity = 60/180 (33.33%), Postives = 93/180 (51.67%), Query Frame = 0 Query: 214 PGPNR-LLILFSIIMAAALAALGVTVGQFVDVSPLATLSLQPAMFLLGAVLAMPLFGIDALLQNVQEDTASEVYSLSIFGTTTPVLSV--VALAAAVTLATGVGEETLFRGLIQQGIASLAGPWVGLVVGAGVFGLAHKMGPSDVLFISLSGAYMGLVFLQYGDLTVPIATHATYDFLIL 390 P P++ +++ +++ LA L + +G+ V PL + LG + A+P++ +L + + TP+L A A + LA GVGEE LFRG++Q G+A G W GLV + +FGL H + + VL L GAY+G V++ G+L V + HA YDFL L Sbjct: 13 PTPDQGAVVVAAVLFEGGLAPLALAIGRLVGQPPLEGFTWSIRDAFLGVLAALPMYAAFQVLMRWRIGPLDRIRRF-FEAELTPLLGSRPDADLALIALAAGVGEEMLFRGVLQGGLAHWLGTWEGLVAASLLFGLLHPITTTYVLVAGLLGAYLGAVWIFSGNLLVVMIAHALYDFLAL 191
BLAST of EWM24269.1 vs. NCBI_GenBank
Match: gi|491474543|ref|WP_005332286.1| (CPBP family intramembrane metalloprotease [Aeromonas media] >gi|615553546|gb|AHX62591.1| CAAX amino protease [Aeromonas media WS]) HSP 1 Score: 77.411 bits (189), Expect = 2.241e-12 Identity = 43/80 (53.75%), Postives = 55/80 (68.75%), Query Frame = 0 Query: 309 LATGVGEETLFRGLIQQGIASLAGPWVGLVVGAGVFGLAHKM-GPSDVLFISLSGAYMGLVFLQYGDLTVPIATHATYDF 387 L T V EE LFRGLIQQG+AS + PW+GL+V + +FG AH GP +LF +L+GA GL FL G L+V IA H ++F Sbjct: 184 LFTCVAEEALFRGLIQQGVASRSKPWLGLLVASLLFGAAHLAGGPLLMLFAALAGACYGLAFLLSGRLSVAIAIHFLFNF 263
BLAST of EWM24269.1 vs. NCBI_GenBank
Match: gi|652904943|ref|WP_027158995.1| (CPBP family intramembrane metalloprotease [Methylobacter luteus]) HSP 1 Score: 74.3294 bits (181), Expect = 7.004e-12 Identity = 57/165 (34.55%), Postives = 79/165 (47.88%), Query Frame = 0 Query: 229 AALAALGVTVGQFVDVSPLATLSLQPAMFLLGAVLAMPLFGIDALLQNVQEDTASEVYSLSIFGTTTPVLSVVALAAAVTLAT--GVGEETLFRGLIQQGIASLAGPWVGLVVGAGVFGLAHKMGPSDVLFISLSGAYMGLVFLQYG---DLTVPIATHATYDFL 388 A+L + V +G ++P L A G + PLF + L+ +Q D+ + + L I T P L+ + LA GV EE LFRG+IQ I S G +GL+ +FGL H + P L +L G Y+G L YG +L PI H YDFL Sbjct: 20 ASLIVVAVVLGWIAGINPFENLRFSEAAIAYGVLGTAPLFIVFGALEQLQIDSLAHIRRLLI-DTLGPGLNRYHWSDVFMLAAIAGVSEEILFRGVIQPWIESSWGMTIGLIGSNIIFGLVHAVTPLYALMAALVGLYLGWT-LDYGGDRNLLTPIIIHGLYDFL 182
BLAST of EWM24269.1 vs. NCBI_GenBank
Match: gi|1084672188|gb|OGP19921.1| (hypothetical protein A2038_06390 [Deltaproteobacteria bacterium GWA2_57_13] >gi|1084849129|gb|OGQ80443.1| hypothetical protein A3G40_14195 [Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22]) HSP 1 Score: 74.3294 bits (181), Expect = 9.178e-12 Identity = 41/103 (39.81%), Postives = 57/103 (55.34%), Query Frame = 0 Query: 305 AAVTLATGVGEETLFRGLIQQGIASLAGPWVGLVVGAGVFGLAHKMGPSDVLFISLSGAYMGLVFLQYGDLTVPIATHATYDF--LILCGAYFRAKKRMSRSS 405 A ++L G+GEETLFRG+IQ +A PW VV +G+FGL H + P+ + G Y+G + L G+L P+ H YDF +I RA R+S S Sbjct: 90 ALISLLAGIGEETLFRGVIQTALADWLNPWGAWVVASGLFGLGHFITPAYAVVAVFFGLYLGALLLVSGNLLPPMIAHTLYDFFAMIYLLRRHRAITRLSECS 192
BLAST of EWM24269.1 vs. NCBI_GenBank
Match: gi|652888716|ref|WP_027148491.1| (CPBP family intramembrane metalloprotease [Methylobacter tundripaludum]) HSP 1 Score: 73.559 bits (179), Expect = 1.275e-11 Identity = 55/165 (33.33%), Postives = 85/165 (51.52%), Query Frame = 0 Query: 229 AALAALGVTVGQFVDVSPLATLSLQPAMFLLGAVLAMPLFGIDALLQNVQEDTASEVYSLSIFGTTTPVLSVVALAAAVTLAT--GVGEETLFRGLIQQGIASLAGPWVGLVVGAGVFGLAHKMGPSDVLFISLSGAYMGLVFLQYG---DLTVPIATHATYDFL 388 AAL + V +G D++P A L + G + +PLF + L+ +Q ++ ++ ++ +F T L + LA+ G+ EE LFRG+IQ + S G GLV +FGLAH + P + +L G Y+GL + YG +L +PI H YDFL Sbjct: 20 AALILVAVFLGWIADINPFADLYFSESAIAYGVIGTIPLFLLFLTLEQMQTESLIKIKNM-LFETLGSNLHRYHWTDLLILASIAGLSEELLFRGVIQPWMESSWGMTAGLVGSNIIFGLAHAVTPLYAVLAALVGIYLGLS-MDYGGDRNLLLPIVIHGLYDFL 182 The following BLAST results are available for this feature:
BLAST of EWM24269.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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